Garra rufa (doctor fish): 141338563
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Entry
141338563 CDS
T11039
Symbol
shoc2
Name
(RefSeq) leucine-rich repeat protein SHOC-2
KO
K19613
leucine-rich repeat protein SHOC2
Organism
grf Garra rufa (doctor fish)
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_14
LRR_4
LRR_1
LRR_LRWD1
LRR_13
LRR_9
LRR_At5g56370
LRR_5
Motif
Other DBs
NCBI-GeneID:
141338563
NCBI-ProteinID:
XP_073700251
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Position
7:complement(36175574..36220129)
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AA seq
561 aa
AA seq
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MSSTLGKDKDSKEREPKAEGKSKTKGKDAKDGKKDTSGASPAVAFTLDSTIKRPNPPPST
RKKSSNAEVVKELNKCREENSMRLDLSKRSIHLLPSSIKELTQLTELYLYSNKLQSLPAE
VGCLSGLVTLALSENSLTSLPESLDNLKKLRMLDLRHNKLREIPAVVYRVASLTTLYLRF
NRITTVEKDIKNLSKLTMLSIRENKIKQLPAEIGELCNLITLDVAHNQLEHLPKEIGNCT
QITNLDLQHNELLDLPETIGNLSCINRLGLRYNRLSAIPRSLSKCRDLEELNLENNNISV
LPEGLLSSLVNLTSLTLARNCFQSYPVGGPSQFSTIYSLNMEHNRINKIPFGIFSRAKVL
SKLNMKDNQLTSLPLDFGTWTSMVELNLATNQLTKIPEDICGLVSLEVLILSNNLLKKLP
HGIGNLRKIRELDLEENKLESLPNEIAYLKDLQKLVLTNNQLTTLPRGIGHLTNLTYLGL
GENLLQHLPEEIGTLENLEDLYLNDNPNLHSLPFELALCSKLSIMSIENCPLSHLPPQIV
AGGPSFIIQFLKMQGPYRAMV
NT seq
1686 nt
NT seq
+upstream
nt +downstream
nt
atgagcagtactctgggcaaagataaagactctaaggagagggaacccaaagccgaaggg
aaatccaaaaccaaagggaaagatgccaaagacgggaagaaagacacgagcggcgcgtcg
cccgcggtggccttcaccttggacagcacgataaagcggcccaacccgccgccgagcacg
cgcaaaaaatccagcaacgcggaggtggtcaaggagctgaacaagtgccgtgaggagaac
tctatgcgcctggacctgtccaagaggtccatccatctgttgccctcttccatcaaggag
ctgacccagctgaccgagctctacctgtacagcaacaagctgcaaagcctgccggccgag
gtgggatgcctgtcggggctggtgacgctggcgctcagcgagaactccctcaccagtctg
cccgaatcgctggacaacctgaagaagctgcgtatgctcgacctgcggcacaacaagctg
cgggagatcccggccgtggtctaccgcgtcgcctccctcaccacgctctacctgcgcttc
aatcggatcaccaccgtcgagaaggacatcaagaatctgtccaagctcaccatgctcagc
atccgggagaacaagattaaacagctgcccgccgagatcggtgagctctgtaacttgatt
actctggatgtagcccacaaccagctggagcaccttcctaaagagatcggcaattgcact
cagatcaccaaccttgacctgcagcacaatgaacttcttgacctacctgagactataggt
aacttgtcatgtataaaccgtctgggtctgaggtacaaccgattatcagcgatccctcga
tctttatcgaagtgccgagatctggaagagctcaaccttgaaaacaacaacatctcagtg
ttaccagagggtcttctctccagtctggtgaacctgacgagtctgacgctggcacgaaac
tgtttccagtcttacccagtgggcggcccgtcccagttctccactatttactcactcaac
atggagcacaaccgtatcaacaagatcccttttggcatcttctcccgagccaaagtgctc
agcaagctcaatatgaaggacaaccagttaacgtctcttccgctggattttgggacgtgg
accagtatggtggagctgaacttggcaacaaaccagcttaccaagattccagaggatatc
tgtggacttgtgtctttagaggtcctcatattgtccaacaatctcttgaagaagttgcct
catgggattgggaacttacggaaaattcgagagcttgacctggaggagaacaaactggag
tcccttccaaatgagattgcctaccttaaggatctgcagaaactcgtgttgaccaataat
cagctgaccactttgccgagaggaatcggtcacctgaccaacctgacgtacctaggcttg
ggagagaacctgctgcagcacctacccgaggaaatcggtacactggagaacctagaggac
ctgtacctgaacgacaaccccaacctgcacagtctgccgttcgagctggcgctctgcagc
aagctgtccatcatgagcatagagaactgccccctcagccacctcccgccgcagatcgtc
gccggaggcccttccttcatcatccagttcctcaagatgcagggtccctaccgcgccatg
gtctga
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