Garra rufa (doctor fish): 141338691
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Entry
141338691 CDS
T11039
Symbol
irf6
Name
(RefSeq) interferon regulatory factor 6
KO
K10154
interferon regulatory factor 6
Organism
grf Garra rufa (doctor fish)
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
grf03000
]
141338691 (irf6)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
grf04147
]
141338691 (irf6)
Transcription factors [BR:
grf03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters interferon-regulating factors
141338691 (irf6)
Exosome [BR:
grf04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
141338691 (irf6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IRF-3
IRF
Motif
Other DBs
NCBI-GeneID:
141338691
NCBI-ProteinID:
XP_073700401
LinkDB
All DBs
Position
7:complement(5577543..5596177)
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AA seq
469 aa
AA seq
DB search
MSSHPRRVRLKPWLVSQVDNGTFPGLVWLDREAKRFQIPWKHATRHTPQQEEENTIFKAW
AVETGKYQEGVDEPDPAKWKAQLRCALNKSREFNLIYDGTKEVPMNPLKIYDVCDIPQTS
SNPGSVPTYETDGDEDDIPDTPEPPPPYPPHGMSSSPLAPVWTPPGSVSPMQPPSCPPPS
APPSVEVWPKKEPVDVEMQPPPMEIQTPTMLDAMAMFATPETWISSLPMTDLEVQFYYRG
KEVCPPVTVSNPQGCRLFYGDLGPIVNQEELFGPVSLEQVRFPSTEHISNDKQRLFTSRL
LDVMDRGLILEVSGHDIYAVRLCQCKVYWSGPCAPNPNTPNLIERQHKVKLFCLESFLSG
VVAHQRGQSSSDSPLYDIHLCFGEEWPDGRPRERKLITVQVVPVVARMISEMFSGDCTRS
FDSGSVRLQISIPDIKDNIVTHLKQLYRLLQTHQGQENWPLPPSMQLPH
NT seq
1410 nt
NT seq
+upstream
nt +downstream
nt
atgtcttctcatccgcgtcgagtgcgtctgaagccctggctggtgtctcaggtggacaac
gggacgtttcctggtctggtctggctggaccgtgaggccaaacgcttccagatcccctgg
aaacacgccacccgtcacacgccccaacaggaagaggaaaacaccatctttaaggcctgg
gccgtggagacggggaaatatcaggaaggagtagacgagccagatccggccaaatggaaa
gctcagctgagatgcgccctcaacaagagccgcgagttcaacctcatctacgacgggacc
aaagaggttcccatgaacccgctcaagatctacgacgtgtgtgatattcctcagacctcc
agcaatcctggttcggttcccacatacgagacagacggtgatgaagacgacattcccgac
actcctgagcctcctcctccgtatccaccgcacggcatgagctcgtctccgctggctccg
gtctggactcctccgggctcagtgtcacccatgcagccgcccagctgtcctccgccctca
gctcctccctcagtagaggtttggcccaagaaggagccggtggatgtggagatgcagccg
ccacccatggagattcagacgcccacaatgctggatgccatggccatgttcgccacaccg
gagacctggatcagctccctgcccatgacggatctggaggtgcagttctattaccgcggt
aaggaggtgtgtccgccggtgacggtcagtaacccgcagggctgtcgtctgttctacggc
gatctggggcccatcgtcaatcaggaggagctgttcggccccgtcagtctggagcaggtg
cgcttcccctccaccgaacacatcagcaacgacaagcagcgtctgttcacgagccgcctg
ctggacgtcatggaccgcggcctcatcctggaggtgagcggacacgacatctacgccgtg
cgcctgtgccagtgtaaggtgtactggtccggcccctgcgcacccaaccccaacacaccc
aacctcatcgagcgccagcacaaggtcaagctcttctgcctcgagtccttcctcagcggt
gtggtcgctcaccagcgtggccagtcgtcgtccgactctccgctctacgacattcatctg
tgtttcggcgaggagtggcccgacggcagaccccgcgaacgcaaactcatcacggtgcag
gtggtcccagtggtggcgcggatgatcagcgagatgttttcgggcgactgcacgcgctct
ttcgacagcggcagcgtacggctgcagatctccatccccgacatcaaggacaacatcgtg
acgcacctcaagcagctctaccggctcctgcagacgcaccaggggcaggagaactggccg
ctgccgcccagcatgcagctcccgcactga
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