Garra rufa (doctor fish): 141338756
Help
Entry
141338756 CDS
T11039
Symbol
ncbp2
Name
(RefSeq) nuclear cap-binding protein subunit 2
KO
K12883
nuclear cap-binding protein subunit 2
Organism
grf Garra rufa (doctor fish)
Pathway
grf03013
Nucleocytoplasmic transport
grf03015
mRNA surveillance pathway
grf03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
141338756 (ncbp2)
09122 Translation
03013 Nucleocytoplasmic transport
141338756 (ncbp2)
03015 mRNA surveillance pathway
141338756 (ncbp2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
grf03019
]
141338756 (ncbp2)
03041 Spliceosome [BR:
grf03041
]
141338756 (ncbp2)
Messenger RNA biogenesis [BR:
grf03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Cap binding complex
141338756 (ncbp2)
Spliceosome [BR:
grf03041
]
Common components
Common spliceosomal components
Cap binding complex
141338756 (ncbp2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_10
RRM_5
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
141338756
NCBI-ProteinID:
XP_073700473
LinkDB
All DBs
Position
7:42457376..42461723
Genome browser
AA seq
155 aa
AA seq
DB search
MSIKLNALYSDSYVDISQYRDQHFKGNRYEQEKLLKQSSTLYVGNLSFYTTEEQVHELFS
KSGDVKRIVIGLDKVKKTACGFCFVEYYTRADAENAMRFINGTRLDDRIIRTDWDAGFKE
GRQYGRGKSGGQVRDEYRQDYDPARGGYGKLVQKS
NT seq
468 nt
NT seq
+upstream
nt +downstream
nt
atgtctattaaactaaatgctctttacagcgactcatatgtggatataagccagtatcga
gaccaacattttaagggcaaccgttatgagcaggagaagctgctgaagcagagctccact
ctgtatgtgggaaacctgtccttctacaccacagaggagcaggtccacgagctcttctct
aagagcggagacgtcaagaggatcgtcatcggccttgacaaagtcaagaagacagcgtgt
ggcttctgtttcgtagaatattacactcgtgctgacgctgagaatgccatgaggttcatt
aatggcacgaggctggatgaccggatcatccgaacggactgggacgcaggatttaaagag
ggaagacagtacggccgtggcaaatcaggcggccaggtcagagatgagtacagacaggac
tatgaccccgccagagggggttatgggaaactggtgcagaagtcttga
DBGET
integrated database retrieval system
