Garra rufa (doctor fish): 141338779
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Entry
141338779 CDS
T11039
Symbol
pex6
Name
(RefSeq) peroxisomal ATPase PEX6
KO
K13339
peroxin-6
Organism
grf Garra rufa (doctor fish)
Pathway
grf04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
141338779 (pex6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
grf04131
]
141338779 (pex6)
Membrane trafficking [BR:
grf04131
]
Autophagy
Pexophagy
Other pexophagy associated proteins
141338779 (pex6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
AAA_16
ABC_tran
AAA_22
AAA_33
RuvB_N
AAA_5
AAA_7
DUF815
nSTAND3
PEX6_4th
AAA_29
Mg_chelatase
TIP49
AAA_25
Vps4_C
RNA_helicase
NPHP3_N
AAA_24
AAA_14
AAA_28
TsaE
AAA_17
IstB_IS21
Parvo_NS1
PhoH
SLFN-g3_helicase
Motif
Other DBs
NCBI-GeneID:
141338779
NCBI-ProteinID:
XP_073700499
LinkDB
All DBs
Position
7:complement(43010961..43047805)
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AA seq
1071 aa
AA seq
DB search
MAASMKLHRLDDFPSHIHPLHVLINKSQFTQKFPDYSGPTYALLLSLTDRRSPSTRGFLV
SAHVTHVTEEEPNVNIRTCLAVYVSRSFLKHYGLKENSSGTLRPQSLLPLKKIVIGARTK
QSFKWASSEKFSNGLLILASCPGQTLLARQGDALLIPYHHLLGEEAAQVQQYLSDVLVLE
CTPVSQGMITVDTSVVVSDCRDLDLSIPSITSTSRLSANSLFVSDFAQYANSLTSGSSLL
NSKVLDFSAVLQALECRLDVRVVDVSNLQKPGGLLSRLEPSEALDVDSTIFVNKSLLLKL
GVFNGEWVIASVPSEKAKKTPLVLSPVLGEREVSCKRTGRAHLVAVRAFDGVKHQDVDVG
FISAVQWFNLSDGMAVPVGNKTIKIKRWNKVSPHEECQMSMSACRSAAPPFAKELQIEAV
ISPDYSSHGPFDSILYKHFSTARLVQRGDILGIPTEGHPDLMESRSEGVLRWPVLYFRVK
QVCGVSAEEEEGSSYLADTNHTSLYMGGSAHSLSPCSVLQKGSSFWTSLCPPGLSSTVEQ
LLTIIQPHFTESSLTLKRGCSVLLMGPNGSGKVTAVTAASRRLHLHLIKVDCVSLCADTA
AACEAKMKTVFERAELHHPCVLLLRNLQLLGQPRDGTETDSRVASTLCQLIADVHASVVV
VGSVSSQRELSSDVMAAFVHQLAIESLSEEQRRAMLSSLSEDLMLGKDVNLGKIAKQTAG
FVLGDLCALLTNAGKAAHRRLLQTYFPEAASEQEEEDLCVSGVSVTSEDFSKALDVLQEA
HSQAIGAPKIPSVRWQDVGGLQQVKKEILDTIQLPLEHPELLSLGLRRSGLLLYGPPGTG
KTLLAKAVATECTMTFLSVKGPELINMYVGQSEENIREVFSKARTAAPCIIFFDELDSLA
PNRGHSGDSGGVMDRVVSQLLAELDGLHSSGDVFVIGATNRPDLLDQSLLRPGRFDKLVY
VGVNEDRESQLQVLKAILRKFKVDPSVCLSEVVESCPPQLTGADLYALCSDAMMCAIKRK
ISHIAEGVDSELSALTLCSEDFRQALSGLQPSVSEQQLNRYKLIQQKFTTK
NT seq
3216 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgtctatgaagttgcaccgtctggatgactttccatcgcatattcatcctcta
cacgtgcttatcaacaaatcgcaattcactcaaaagtttccagactactccggaccaaca
tacgctttgctattatcactaacggacaggcgttcaccttccacccgcggctttttggtg
agcgcgcacgtaacgcacgtaacagaggaagagccaaatgtaaacattcgcacgtgtctc
gctgtttacgtgagtagatctttcctcaaacactacggtctgaaggagaactcatcggga
acgcttcgtccacaatctctgctgcctttaaagaagatagtcatcggtgctcggacgaaa
cagagctttaaatgggcttcttcggagaagttctccaacggtcttctgatcctggcgtcc
tgtcctggacagactctattggcgagacaaggagatgctcttctcataccctaccatcat
ttactgggagaggaagccgcacaggtgcagcagtacctgtcagatgtgctggtgctggag
tgcacacctgtcagtcaaggtatgataacagtggacactagtgtggttgtgtctgactgc
agagatctggacctgagcatccccagcatcaccagcaccagcagactgtctgccaactct
ctctttgtgtctgattttgcccagtatgccaatagtttgacctctggcagctctttgttg
aatagcaaagtgttagacttcagtgctgtcttacaggctcttgaatgcagacttgatgtc
cgagtggtggacgtctccaatcttcagaaacctggaggacttctgtctagactagagccg
agtgaagcgttggacgttgacagcactatttttgtaaacaagagcttgctcctgaagctg
ggtgtgtttaacggggagtgggtcattgcgtccgtcccatcagagaaggctaagaagact
cctctggtgctgagtcctgttttgggcgagcgtgaagtttcctgtaagaggacaggacgt
gctcatctggttgcagtcagagctttcgatggagttaaacaccaggatgtggatgtggga
ttcatttcagcggttcagtggtttaacctgtcggacgggatggcagtgcctgttggaaat
aagaccatcaaaattaagaggtggaataaggtgtcgccgcatgaggagtgtcagatgtcc
atgagcgcgtgtcgaagtgcagctccgccgtttgctaaagagctgcagattgaagcggtg
atctctccagactacagctcacacggacccttcgacagcatcctctacaaacacttcagc
acagccaggctggttcagaggggggatatactagggatccccactgaaggacaccctgat
ctgatggagagccgctctgaaggagtcctcaggtggccagtgctgtacttcagagtcaag
caggtgtgtggcgtctctgctgaggaggaagagggctcttcatatctggctgataccaac
cacacttcactctacatgggaggctccgcccacagtctgtctccttgctctgtgctacag
aagggttcgtctttctggacgagtctctgtcctcctggtctgtctagcactgtagagcaa
ctgctcactatcatccaacctcacttcactgaaagctctttaacattaaaaagaggctgt
tcagttcttctgatgggtccgaatggcagtggtaaagttaccgcggtaacagcagccagc
aggaggctacatctgcatctgatcaaggtggactgcgtcagtctgtgtgccgacactgca
gctgcgtgcgaggctaagatgaagactgtctttgagcgagctgagctccatcacccctgt
gttttgctgctgagaaacctgcagctgctcggccagccgcgggacggcactgagacggac
tccagggtcgcttccaccctctgccagctcatagcagatgttcatgccagtgtggttgtg
gtaggctcagtaagcagccagcgggagctgtcctcagatgtgatggcagcgtttgtgcac
cagctggcgatagagagcctgtccgaggagcagcgcagggcgatgctgtccagcctcagt
gaggacctgatgttgggaaaagacgtcaatcttggcaagattgccaaacagacagctggt
tttgttttaggagatctttgcgcactccttaccaacgcaggaaaagctgctcacagacga
ctgctgcagacgtattttccagaagcggcgagtgaacaggaagaggaggatctgtgtgtc
tctggggtgagcgtcacgtctgaggactttagcaaagcactggacgtcctacaagaggca
cattcgcaagccattggagcaccaaagatcccgtcagtgagatggcaggacgtcggtgga
ctgcagcaggttaagaaggaaattctggacacgattcagcttcctctggagcatccagag
ctgctctcgctggggctgcggcgctccggactgctgctctacgggccgcctggcaccgga
aaaactcttctggccaaagccgtcgccaccgagtgtaccatgaccttcctcagtgtgaag
ggtcctgaactcatcaacatgtacgttggtcagagtgaagagaacattcgagaggtgttc
agtaaggccagaaccgctgctccctgtattattttctttgatgagctggactctttggct
cctaatagaggccacagtggagactcaggaggggtgatggacagggttgtgtcacagctt
ttagcagagctggatggtcttcattcatctggagatgtctttgtgatcggagcaactaat
cgccctgatctgctggaccaatcattgctcaggcctggcagatttgataagctggtgtat
gtgggtgtgaatgaagacagagagtcacagttgcaggttctgaaggcaatcttgcgcaag
tttaaggtggatcccagcgtgtgtctgtcggaggtcgtggagtcctgtcctcctcagctg
accggagccgatctctatgcgctctgctcggatgccatgatgtgcgccatcaaaaggaag
atttcacacatcgctgaaggtgtggattcagagctcagcgctctgactctgtgttcagaa
gacttcagacaggctctttcaggccttcagccctccgtctccgaacagcagctcaacaga
tacaagctcatccagcagaaattcaccacaaaataa
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