Garra rufa (doctor fish): 141338987
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Entry
141338987 CDS
T11039
Name
(RefSeq) uncharacterized protein isoform X1
KO
K16469
rootletin
Organism
grf Garra rufa (doctor fish)
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
grf03037
]
141338987
Cilium and associated proteins [BR:
grf03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
141338987
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rootletin
Motif
Other DBs
NCBI-GeneID:
141338987
NCBI-ProteinID:
XP_073700700
LinkDB
All DBs
Position
7:complement(7329346..7366445)
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AA seq
1997 aa
AA seq
DB search
MSASENPNESKLETVIQRLEESVLSEEKRLTVRGSSPDEPPATLPARVREIVSRNLSASA
GGMSSGLSLQDENRLLQAELSRVEDLLAHSRAERDELAIKYSAISERLEQALRLDTAEEG
HDSPESRSLAQQNVDLRRRLDEEQAAYKRKLTAYQEGQQRQAQLVQKLQAKVLQYKKKCA
DLEQTLLERSTAQCDSNGHRRDEDEPSSELESALIRLEEEQQRSSGLSAVNAMLREQLEQ
AGLANEALSQDIRRLTADWTKAREELEQRESDWRREEESFHSYFSSEHNRLLALWRQVVG
FRRHVCELKSATERDLSEVRNELACTAQSVQLQCVSVCAGLRSRENGSALLLERETAQRM
QLEQQLRETVTEMMTLQNKSDSERAELNTRLGDAVRELERLKARVEDREQEVTALNRKLQ
DQRSLEETEVHSLKKHTAALQNTLRDITQLVLSDSDGVDGNTEESLLPLLRSSSSSSSSS
AIIPDSCLSALRSTLTSRQIQLQELRERLQSAQSSVQQLRRQQGEAESSRREAELRLQTL
QAERDDAQRERETAVRDRDRLRQERDAQSSEKDVVDKAAQAAQTQVQLLQLECDRLQLAV
TSAQREREHEREERDAAALERERARAETDRIQQLWEESERRASSLRAELTALRESLQQGA
TDRQLMEAENRQLSDALNRSGSSHTELSLVLTKLHSEESSLRDSLAKMSGINESLAQDKS
DLNTLIVQLEEEKSVLLSQRREAEQEKLTIRDELVRSEQERLELDSVRLALHQSLQESEM
ARAGLEAELQSLQADRAKLQDRITQLIGEVNGLEAELGSLRGEGDRQSGALEEAVRGRAE
LVRERAGLLVQLTASERENAALTEELAAFRTERENLETSLFELQQQINQMESRREQLESD
NQNLRLRSDSITAELKRLRAERETVVSQIEKEKEALRDALTAAQQEAQRCLRSALSDHQE
ELERLSNQKEALRCSLEAEREAALRRVHEQLEEQTVRLERESEELQEELRTLQRDRDQSL
LQAETDKQQALSVKEAEKAVLSEKVSSLQAELSTAALETDRLNRETALLREQERAAVASL
NTELQELRSRLQEAAGTQGRELRRLQETCSEQQTRADTALSELEECRALLASSEESRDAA
RRELLEMDKHLGQIRDAGEGHRREGVELRHSLSDVTKERDALSQSNLQLREALRAAESER
ISVKRVCEEKEQKACLLEESLASAQKEVCDLRSCLREVERSRLEARRELQELRRQVKVLD
VEREQKGKQLAELQTRLSLEEQKEEERARELISLKQRLADSETSRNSLQKEVSCLQRRVS
ESEASWRSRERELASQLQEARGCEKKLQDESRNVSVRAQAACEASAQMQLELSEAQGRLT
ATEAELSRAEASRRDLEFRLCSLQSALTRTLGIGASGRSSSRGRSPAGSSPSSLTSGMMS
RHRSVSPLHCSLSPSKDVAGNVTPDNTIVLRPLSPERTDAPLPVAPPELDPETLRSGLRD
FLQELREAQRDRDEARGQLGSVQRELEEVAGERDSAHQRLIQLHHTLQECQDDKRTVDEK
LSSTQAVLQQQEESLRRAERERRALNERIKELERLSLNTETERKRVEEQCSKLRGSEARL
EAERRRLREALEAAEGRGTRVELGRRSLEGELQRLRLSLAEREMEIQTAHDRHDSAIKQV
TEGEARVASLQREVERLTALLSKAQDGESAQKERALALSQSLQEATAAHSATQGRLATLQ
KTLAHTESERRQLQERVDGLRASGSDGKRTIAALTERVQILQSELTQSQLRRSELETELH
NTQEALRQKTDSLTEAQRGLQSAQTDRASAEERLRSLQRAVALLETEKRDAERQAVRLEK
DKSALRNTLDKVERQKLKTEESSMRLCAEKGRLDRSLNTVEQELQDAQRQIVLLQAQLAE
LEQSHSVSEQAARLREDAQREAERLRVSQREAERTLAARERAHRQRIKGLEEQVSTLKEQ
LQQEIRRRTPSLLSAVS
NT seq
5994 nt
NT seq
+upstream
nt +downstream
nt
atgagcgcttctgaaaaccccaacgagtccaaacttgagacggtcattcagaggttggag
gagagtgttctgtccgaggagaagcggctgacggttcgaggatcttctccagatgaacct
ccggccactttaccggcccgcgtgcgagagatcgtctccaggaacctgagcgccagcgct
ggaggcatgtcgtcgggtctgtcgcttcaggacgagaaccggcttctgcaggcggaactg
agtcgcgtggaggatcttctggctcacagtcgagcggaacgagatgagctggccatcaaa
tacagcgccatcagcgagagactggagcaggcgctgcgtttggacacggccgaggaggga
cacgactctcctgagtctcgcagtctggcgcagcagaacgtagatctgcgcaggcgtctg
gacgaggagcaggcggcgtacaagcgcaaactcacggcgtatcaggaggggcagcagaga
caagcgcagctcgtgcagaaactacaggccaaggttctccagtacaagaagaagtgtgcg
gatctcgagcagacgctgctggaaagatcaaccgctcagtgtgacagtaacggccaccgg
cgggacgaggatgagccgagcagcgagctggagagcgccctcatccggctggaggaggaa
cagcagaggagcagcggcctgtccgccgtcaacgccatgctgcgggagcaactggaacaa
gccggactggccaatgaggcgctcagccaggacatccgcagactcacggctgattggacc
aaagccagggaggagttagagcagagggagtctgattggaggagagaggaggagtctttc
cacagttacttcagcagcgagcacaaccgtctgctggcgctctggagacaagtggtgggc
ttccgcagacacgtgtgtgaactgaagagcgccacagagagggatctaagcgaggtgcgt
aatgagctggcgtgcacagcacagagcgtgcagctgcagtgtgtgagcgtctgcgcaggc
ctgcgcagtcgtgagaacgggtctgcgctgctgctggagagagagacggctcagcggatg
cagctggagcagcagctcagagagactgtgactgagatgatgacgctgcagaacaagagc
gactcggagagagctgagctcaacacacggttgggggacgcagtgagagagctggagcgt
ctcaaagctcgtgtggaggacagagaacaggaagtcacagcgctcaacaggaaactgcag
gatcagaggagtctggaggagacagaggtccattcactgaagaaacacactgcagctctg
cagaacacactccgagacatcacacagctggtgttgtctgacagtgacggtgtggacgga
aacactgaggagtctctgcttcctctgctgcgctcttcatcttcatcatcgtcttcatca
gccatcatccctgacagctgtctgtctgcactgcgctccactctgaccagcagacagatc
cagctacaggagctgcgtgagcgtctgcagtctgctcagtcttcagtgcagcagctgcgc
agacagcagggggaggcggagtcaagcagacgagaggcggagctccgcttacagacgctg
caggcagagagagacgacgctcagcgggagagagagaccgctgtgagagatcgagaccga
ctgagacaggagagagacgcacagagcagtgagaaagatgtggtggataaagctgcgcag
gcggcgcagacgcaggtgcagctgctgcagttggagtgcgacaggctgcagctggccgtc
acgtctgcgcagagagagcgtgaacacgagcgagaggagagagacgccgccgcgctggag
agagagcgagcacgagccgagaccgacagaattcagcagctgtgggaggagtcagagcgg
cgtgcgtcttcactgcgtgctgaactgacggcgctgagggagtctctccagcagggggcc
acagaccgacagctgatggaggccgagaacagacagctgagcgacgcgcttaacaggagc
gggagcagtcacactgagctgtctctagtgctcactaagcttcactcagaggagtcgtca
ctcagagattctctggctaagatgagcggcattaacgagagtctggcgcaggacaaatct
gacctcaacacgctcatcgtccagctggaggaggagaagagtgtgttgctgtctcagaga
agagaagcggagcaggagaagctgaccatcagagacgagctggtgcgctcagagcaggag
cgactggagctggactctgtccgtctcgctctccaccaatcgctgcaggagtctgagatg
gccagggcggggctggaggcggagcttcagtcgctgcaggcagacagagccaaactccag
gacagaatcacacagctgattggtgaggtgaacggtttggaggcggagctcggttctctc
cgcggtgaaggagacaggcagagcggcgctctggaggaggcggtgcgtgggcgggcggag
ctagtgcgagagagggcggggcttctggttcagctgacggcgtcagagcgagagaacgcc
gccctcacagaggagctcgccgccttcaggacggagcgggagaatctggagaccagtctg
ttcgagctgcagcagcagataaatcagatggagtctcgacgcgaacaactggagtcagac
aaccagaacctcagactgcgctctgacagcatcacagcggagctgaagcgtctgcgcgcc
gaaagagagacggttgtgtctcagattgagaaagagaaggaggctctgagagacgcgctg
acggccgctcaacaggaggctcagagatgtctgcgcagcgctctgtctgaccaccaggag
gagctggagagactctccaatcagaaggaggcgctgcgctgcagtctggaggcggagcgg
gaggcggctctgaggcgtgttcatgaacagctggaggagcagacggtccgtctggagaga
gagagcgaggagcttcaggaggagctgcggacactacagcgcgacagagaccagagtctg
ctacaggccgagacggacaaacagcaggcgctgtccgtgaaggaggcggagaaggcggtt
ctgtcggagaaggtgagctctctacaggcggagctgagcactgcagcgctggagacggac
agactcaaccgagagacggcgctcctcagagaacaagagcgggctgcggttgcgtctcta
aacacagagctgcaggagctgcgcagtcgtctgcaggaggccgccgggacacaggggcgt
gagctgcgcagactgcaggagacctgctcagagcagcagacgcgagcggatacggctctc
tctgagctggaggagtgtcgcgcgctgctggcgtccagcgaggagagccgtgacgccgcc
agacgagagctgctggagatggacaaacacctgggacagatacgggacgcgggggagggg
cataggagagagggggtggagctgagacactccctcagtgatgtcactaaagagagggac
gctctcagccaatcaaacctgcagctgagggaggcgctgcgagcggcagagagcgagaga
atcagcgtgaagcgcgtgtgtgaggagaaggagcagaaggcctgtctgctggaggagagt
ctggcgtctgcgcagaaggaggtgtgtgatctgcgcagctgtctgcgtgaggtggagagg
tccaggctggaggcgcgcagggagctgcaggagctgcgcagacaggtgaaggttctggac
gtggagcgcgagcagaaggggaagcagctggcagaactgcagacgcgtctgtctctggag
gagcagaaagaggaggagagagccagagaactgatctcactcaaacagagactcgcagac
agcgagaccagcagaaactctcttcagaaagaggtgagttgtctgcagcggcgtgtgagt
gagagcgaggcgagttggcgcagtcgtgagcgtgagttggcgtctcagctgcaggaggct
cgcggctgtgagaagaagctgcaggacgagtctcgtaatgtgtcggtgcgcgctcaggcg
gcgtgcgaggcgtctgctcagatgcagttggagctgagcgaggctcagggtcgtctgacg
gcgacggaggcggagttgtctcgtgcggaggcgtcccgcagggatctggagttccggctc
tgcagtcttcagtcggccctcacgcggacgctgggcattggggccagtgggaggagcagc
agcagggggcggagcccggcaggctcctccccttcctctctgacctcagggatgatgtcc
cgccaccggagcgtgtctccgctgcactgctcgctgtcgccatctaaagatgtggcaggt
aacgtcactcctgataacaccatcgtgttgcggccgttgtctccagagaggacagacgcc
ccgctgcccgtcgccccgccggagctggaccccgaaaccctgcgcagcggcctcagagac
ttcctgcaggagctgcgcgaggctcagagagacagagatgaagcgcggggtcagctgggg
tcagtgcagagggaactggaggaagtggcgggagagagagactccgcccaccagcgcctc
attcagctgcaccacacgctgcaggagtgtcaagatgataagcgtacggtggacgagaaa
ctgtcctcgactcaagctgtgctgcagcagcaggaggagtccctgcggagagcggagcga
gagagacgagcgctgaacgagcgaatcaaagagctggagagactgtcgctgaacaccgag
accgagcgcaagcgtgtggaggagcagtgcagtaagctgcgcggcagcgaggcgcgtttg
gaggcggagcgtcggcggctgcgggaggctctggaggcggccgaggggcgtggcacacgg
gtggagctggggaggcggagtctagagggcgagctgcagagactgagactgagtctggcc
gagagagagatggagatccagaccgcgcacgaccgccacgacagtgctatcaaacaggtg
acggagggtgaagctcgtgtggcgtctcttcagcgtgaggtggagcggctgacggcgctg
ttgtctaaagctcaggacggagagagcgctcagaaagaacgagcactcgctctctcccag
agcctgcaggaagccaccgccgctcacagcgccacccagggacgcctcgccacactgcag
aaaacactggcacacactgagagcgaacgcagacagctgcaggagcgtgtggacggactc
agagcgtcagggtcggacgggaagcgtaccattgcggcgctaacagagcgtgtgcagata
ctgcagtcagaactgacccagagtcagctgcgcagatctgagctggagacggagctgcac
aacacacaggaggctctgcggcagaagacagacagtctgaccgaagcccagcgtggtcta
cagtctgcgcagacagacagagcgtctgcagaggagcgtctgcgcagcctccagagagcc
gtggccttactggagaccgagaagagagatgcagagcgacaggccgtccggctggagaaa
gacaagtccgcactgagaaacacactggataaggtggagcgtcagaagctgaagacggag
gagagcagcatgcgtctgtgtgcagagaagggtcgtctggatcgctcgctcaacaccgtc
gaacaggagctgcaggacgcgcagagacagatcgtgctgctgcaggctcagctggcggaa
ctggagcagagtcacagcgtcagcgagcaggcggcccgtctgcgtgaggacgcccagcgg
gaggcggagagactgcgcgtcagtcagagagaggcggagcggacgctggcggcccgagag
agagcgcaccggcagcgcatcaagggtctggaggagcaggtgtccacgctcaaggagcag
ctccagcaggagatccgccgcagaacgccctcgctgctgtccgctgtcagctga
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