Garra rufa (doctor fish): 141339156
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Entry
141339156 CDS
T11039
Name
(RefSeq) calpain-2 catalytic subunit-like
KO
K03853
calpain-2 [EC:
3.4.22.53
]
Organism
grf Garra rufa (doctor fish)
Pathway
grf04141
Protein processing in endoplasmic reticulum
grf04210
Apoptosis
grf04217
Necroptosis
grf04218
Cellular senescence
grf04510
Focal adhesion
Brite
Enzymes [BR:
grf01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.22 Cysteine endopeptidases
3.4.22.53 calpain-2
141339156
Peptidases and inhibitors [BR:
grf01002
]
Cysteine peptidases
Family C2: calpain family
141339156
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Gene cluster
GFIT
Motif
Pfam:
Peptidase_C2
Calpain_III
EF-hand_6
EF-hand_1
EF-hand_7
EF-hand_8
CAPN13-like_C_EFh
DUF5580_M
Motif
Other DBs
NCBI-GeneID:
141339156
NCBI-ProteinID:
XP_073700890
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Position
7:34356562..34374966
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AA seq
698 aa
AA seq
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MSNIAKVLSRRQDREEGVGTNEKAIPFKKQDYQSLKQECLAKGTLFCDPTFPAESDSLGY
DALGPQSSKTKGVQWKRPKELCSNPEFIVDGAKRTDICQGALGDCWLLASIASLTLDNQF
LERVVPHGQSFKENYAGIFHFQFWQFGEWVDVVIDDRLPTKNGKLLFVHSAERSEFWSAL
LEKAFAKVNGSYESLKGGRPIEGFEDFTGGIAESYMLNKAPPHLFKLMQKALMLGSLMGC
CISKSSSQVTESEKHLKLVKGHAYSITGAEEVHSYGHPVQLVRMRNPWGRVEWTGPWSDN
SEEWNSIQPEERAKLFYSAEDGEFWMAYSDFIQKFSMLEICNLTPDALSSNTVSHWNYSQ
FEGDWRVGSTAGGCNVNEDTFCSNPQFVIKLEEEDDDPHDGEVSCTILVGLMQKDCRKGK
RFGRYLNTIGFTIYKVPDEFRGRNNIHLGPDVLLHQQSIAEIFDDLREVSERFKLPPGEY
VIIPSTFEPNCKGSFVLRVFTEKEAAASLLDTEISADVKKQYISESDVDPHFRKLFNQIA
GNDSEVSVFELQKVLDSVISKRTDVKTDGFGIGTCRHIISLLDRDGSGKLGLVEFHILWI
KIQNYMEVFKTHDRDNSGTMSSHEMRDAVKEAGFQLNNDVLQVIISRYANQQFAIDFDSF
VDCLIRLEMYFKVFKVFNKKNTGKIDLEIMQWLCLALN
NT seq
2097 nt
NT seq
+upstream
nt +downstream
nt
atgtctaatatcgcaaaagttctttctaggaggcaggatagagaagaaggagtgggaaca
aacgagaaggcgattcccttcaagaaacaagactaccagagcctgaagcaggagtgtctg
gccaaaggaaccctgttctgtgacccgaccttccctgctgaatccgactctcttggatac
gatgcacttggaccgcagtcctccaagactaaaggagtacagtggaaaagacctaaggag
ctctgctcaaaccctgagttcattgtggacggcgctaaacggacagacatctgccaagga
gctttaggtgactgttggttgctggcatctattgcatctttgactctggataatcagttt
ctggaacgtgtagttccacatggacagagttttaaagagaactatgctggcatttttcac
tttcagttctggcagtttggtgaatgggtggatgtggtcattgatgacaggctgcctacc
aaaaatgggaagctactgtttgttcattcagctgagcgctctgaattctggagcgccctg
ttggaaaaggcctttgcaaaggtaaacggctcatatgaaagtctgaagggaggccggcca
attgagggttttgaggatttcactggaggcatcgctgagagctatatgctgaacaaagct
cctccacacctgtttaagctcatgcagaaagcactgatgctgggatcattaatgggctgc
tgcatttctaagtccagttcacaggtgacagaatcagagaaacatctaaagctggtgaag
ggtcatgcctactccatcacaggcgcagaggaggttcattcttacggccatccggttcaa
ctggtgcgtatgaggaacccgtggggccgggtggagtggacaggcccttggagtgacaat
tccgaagagtggaacagcatccaaccagaggagagagctaaattgttttattcagctgaa
gatggagagttctggatggcgtattcggacttcatacagaagttctcgatgttggagatc
tgtaatctgactccagatgccctttcaagcaacactgtgagccactggaactacagccag
tttgaaggcgactggagggtgggatccaccgcagggggctgcaatgttaacgaagataca
ttctgctccaatcctcagtttgtgatcaagctggaggaagaagatgatgatcctcatgat
ggagaggtcagctgcacgatcctagtgggtctgatgcagaaagactgtcgtaaaggcaag
cggtttggacgatacctgaacaccattggcttcactatctataaggttccagatgagttc
aggggtcgcaataacattcatctcggtcctgacgtactgctgcatcagcagtccattgca
gaaatcttcgacgacctacgagaagttagcgagcgcttcaaactgcctccgggtgaatat
gtcatcattccctccacttttgagccaaattgcaagggaagcttcgtactgcgtgtgttc
acagagaaagaagctgctgccagcctgttagatacggagatcagtgcagatgtgaaaaag
caatacatttccgagagtgatgtggacccacatttcagaaagcttttcaatcagattgct
ggaaatgactcagaggtgtctgtgtttgaactacagaaggtcctggacagtgttatctca
aaacgaactgatgtgaagacagatggctttggtatagggacttgtcgccacattatcagc
ctgctagatagagacgggagcggcaaactcggccttgtggagtttcacatactgtggata
aagatccagaattatatggaggtttttaagacgcatgatagagacaactcgggcactatg
agctcccatgagatgagagatgccgtgaaagaagcagggtttcagctgaacaatgacgta
cttcaagtgataatctcacgctatgccaatcagcagttcgccattgactttgatagcttc
gtggactgcctgattcgcctggaaatgtacttcaaagtatttaaagtgtttaataagaag
aacaccggaaaaatcgatttggaaatcatgcagtggctctgcttggcccttaattga
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