Garra rufa (doctor fish): 141339306 Help Entry 141339306         CDS       T11039                                  Symbol capn1b Name (RefSeq) calpain-1 catalytic subunit b   KO K01367   calpain-1 [EC:3.4.22.52] Organism grf  Garra rufa (doctor fish) Pathway grf04141   Protein processing in endoplasmic reticulum grf04210   Apoptosis grf04217   Necroptosis grf04218   Cellular senescence grf04382   Cornified envelope formation Brite KEGG Orthology (KO) [BR:grf00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    04141 Protein processing in endoplasmic reticulum     141339306 (capn1b)  09140 Cellular Processes   09143 Cell growth and death    04210 Apoptosis     141339306 (capn1b)    04217 Necroptosis     141339306 (capn1b)    04218 Cellular senescence     141339306 (capn1b)  09150 Organismal Systems   09158 Development and regeneration    04382 Cornified envelope formation     141339306 (capn1b)  09180 Brite Hierarchies   09181 Protein families: metabolism    01002 Peptidases and inhibitors [BR:grf01002]     141339306 (capn1b) Enzymes [BR:grf01000]  3. Hydrolases   3.4  Acting on peptide bonds (peptidases)    3.4.22  Cysteine endopeptidases     3.4.22.52  calpain-1      141339306 (capn1b) Peptidases and inhibitors [BR:grf01002]  Cysteine peptidases   Family C2: calpain family    141339306 (capn1b) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Peptidase_C2 Calpain_III EF-hand_6 EF-hand_1 EF-hand_8 CAPN13-like_C_EFh EF-hand_5 Motif Other DBs NCBI-GeneID:  141339306 NCBI-ProteinID:  XP_073701028 LinkDB All DBs Position 7:complement(34271102..34290144) Genome browser AA seq 704 aa AA seqDB search MYSIGGVTTRIYKERLQAEGMGTNENAVKFLNQDYEELKRACVESGRLFEDPCFPAVPQS LGFKELAPRSSKTQGVQWIRPTELSDNPQFIVGGATRTDICQGALGDCWLLAAIASLTLN DRLLHRVVPHGQSFTDEYAGIFHFQFWQFGEWVDVVIDDRLPVKDKELMFVHSAEGNEFW SALLEKAYAKLNGSYEALSGGSTTEGFEDFTGGVSEMYELRKAPKDLHRIIAKALERGSL LGCSIDITSAFDMEAVTFKKLVKGHAYSVTGLRELNFRGRKERLIRIRNPWGQVEWTGAW SDNSSEWNGIDPAEREEMNNHMEDGEFWMSFDEFKRQFSRLEICNLTPDALSEDSLSFWN TIKFDGSWRKGSTAGGCRNHPNTFWINPQYKITLLEEDDDPEDDEVSCSFLVALMQKDRR SYRKQGQDMHTIGFALYEVPDEFRGSQSVHLKKDFFLRQSSCARSQTFINLREVSTRLKL PPGEYLIVPSTFEPGKEADFVLRVFTEKQSETQEMDDEISFNMEDEEEVSEEDMEDSFKK LFSQLSGEDMEISVHELRTILNRVVGKHRDLKTDGFSLESCRCMVNLLDKDGSARLGIVE FQILWNKIRKWLGIFRQFDLDKSGTMSSYEMRLAVESAGFKLNNRLHQIIVARYSEGETV DFDNFVCCLVKLEAMFRTFKELDKEGSGTAQLNVSEWLYLTMCG NT seq 2115 nt NT seq  +upstreamnt  +downstreamnt atgtattcaattggaggagtgacgacgcgtatctacaaggaacgcctgcaggccgaaggg atgggaaccaatgagaatgcggtcaagttcctgaaccaggactacgaggagctaaagaga gcgtgtgtggagagcggcaggctgtttgaggacccctgctttcctgccgtgcctcagtct ctgggattcaaggagctcgcgccacgctcctccaaaacacaaggcgtgcagtggataagg cccactgagctgtcagacaatcctcagttcatagtgggaggagccacacgtacagatatt tgccagggggccctaggtgactgttggctgttagctgccattgcatccctgacgttaaac gacaggctgcttcacagagttgtacctcatggacaaagctttacggacgagtatgccggc atcttccacttccagttctggcagtttggtgagtgggtggacgttgtgattgatgaccgt ttgccagtaaaggataaagagctgatgtttgtccactcagcagagggaaatgagttttgg agtgccttgctggaaaaagcatatgccaagctgaatggctcatatgaagctctgtcagga ggttccaccaccgaaggctttgaggacttcacgggtggagtgtccgagatgtacgagctg cgtaaagctcccaaagatttgcaccgcatcattgctaaagccttggagagaggctcattg ttgggctgctctatcgatatcaccagtgcctttgatatggaggccgtaacctttaagaag ctggtgaaggggcatgcgtactccgtcacgggtcttagagagttgaacttccgtggaagg aaagagaggctgatccgcatccgaaacccttgggggcaagttgaatggacaggagcttgg agtgacaattcttctgagtggaatgggattgatccagcagagagagaggaaatgaacaac cacatggaggatggcgagttctggatgtcgtttgatgagttcaaacgtcaattttctcgt ctggagatctgtaacctcacgccagacgctctgagtgaagattctctaagtttctggaac acaattaagtttgacggctcctggagaaaaggaagtacagcagggggctgcaggaaccac cctaatactttctggataaaccctcaatataagatcacgctgctggaggaagatgatgat cctgaggacgacgaggtgtcctgcagcttcctggtggccttgatgcagaaggacaggcga agttaccgcaagcaagggcaagacatgcacaccattggcttcgccttatatgaggtccca gatgagtttcgtggttcccagagtgttcacctcaagaaggactttttcttgcgtcaatcg tcctgcgcacgctcacagacctttattaacctgcgggaggtcagcacacgactgaaactg ccaccgggcgagtatctgatagtcccttccacatttgagcctggaaaagaggctgatttt gttctgcgagtcttcactgaaaaacagtcagaaactcaagaaatggatgatgagatttca tttaacatggaagatgaagaagaggtttcagaagaggacatggaggactcatttaaaaaa ttgttttctcagctgtctggagaggacatggagatttcagttcatgagctcaggaccatt ctgaaccgagtggttgggaaacacagggacttgaagacagatgggttcagtttggagtca tgtaggtgcatggtcaacctgttggataaagatggcagtgctcggctgggaattgtggag ttccagattctatggaataaaatcaggaagtggctgggtatttttaggcagttcgatctg gataaatctggcacaatgagctcgtatgaaatgcgcctcgccgtggagtcagctggtttc aaactcaataacaggctacatcagataattgtggcacgatattcagaaggagagacagtt gacttcgacaactttgtctgttgcctggtcaaactggaggccatgttcaggacttttaaa gagctggacaaagagggctcaggcactgctcagctcaatgttagcgagtggctatacctg accatgtgtggttga

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