Garra rufa (doctor fish): 141339307
Help
Entry
141339307 CDS
T11039
Symbol
capn2b
Name
(RefSeq) calpain 2, (m/II) large subunit b
KO
K03853
calpain-2 [EC:
3.4.22.53
]
Organism
grf Garra rufa (doctor fish)
Pathway
grf04141
Protein processing in endoplasmic reticulum
grf04210
Apoptosis
grf04217
Necroptosis
grf04218
Cellular senescence
grf04510
Focal adhesion
Brite
Enzymes [BR:
grf01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.22 Cysteine endopeptidases
3.4.22.53 calpain-2
141339307 (capn2b)
Peptidases and inhibitors [BR:
grf01002
]
Cysteine peptidases
Family C2: calpain family
141339307 (capn2b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_C2
Calpain_III
EF-hand_1
EF-hand_6
EF-hand_8
CAPN13-like_C_EFh
Motif
Other DBs
NCBI-GeneID:
141339307
NCBI-ProteinID:
XP_073701029
LinkDB
All DBs
Position
7:complement(34290575..34305322)
Genome browser
AA seq
698 aa
AA seq
DB search
MSGIASTLAKKRAQAAGFGTNAKATKYLNQDFEALRSQCLSRGSLFSDPSFAAAPESLGF
KELGPSSYKTRGIVWKRPGELCSNPQFIVGGATRTDICQGALGDCWLLAAIASLTLNEDV
LARVVPAGQGFGDNYAGIFHFQFWQFGEWVDVVIDDRLPVKDGELVFVHSAEGNEFWSAL
LEKAYAKVNGCYEALSGGSTSEGFEDFTGGIAENYELQKAPSNMFQIIQKALEAGALLGC
SIDITSASDSEAVTRQKLVKGHAYSLTGATEVNYRGRKEKLVRMRNPWGQVEWTGAWSDS
SSEWNSIPASERPNASAEDGEFWMSFSEFLSHYSRIEICTLTPDAITSDSYKHWAVTNHD
GTWRRGSTAGGCRNNAYTFWMNPQYVIKLNEEDDNPDDNEVGCSFVVGLIQKNRRRLRKS
GEDMHTIGFAIYELPSQFHGQRDVHLDKNFFLTHAQKARSETFVNLREVCTRFKLPPGEY
LVVPSTFEPNKDGDFCLRVFSEKQTETLPCDDPVDAELPDETVSDAEVDSGFRGMFTKLA
GADMEISATELTTILNKIIAKRTDIKTDGFSLETSRIMVNLMDDSGNGKLGLGEFATLWK
KIQRYLGIYKKNDMDNSGTISTPEMRMALKEAGFTLNNTIFQLLVARYAETDMTLDFDNF
VACLMRLEMMFRVFKKLDPHQSGFIELDFQQWLNFTMI
NT seq
2097 nt
NT seq
+upstream
nt +downstream
nt
atgtcgggaatcgcctctaccctggccaagaagagagcgcaggctgcagggtttggaact
aacgccaaagccaccaaatacctcaaccaggactttgaggcgctcaggagccagtgtctc
agcagagggtccctgttctcagacccgagtttcgcagccgcacccgaatccctgggcttt
aaagaactcggacccagctcgtacaaaaccagaggaatagtatggaaaagacctggggag
ctgtgctcaaacccacaattcatcgtcggtggagctacacggacggatatctgtcaagga
gctctcggtgactgctggttgctagcagctattgcttctctgactctgaatgaagacgtt
ctggctcgagtggtgcctgctggacagggctttggtgacaattatgctggaatcttccat
tttcagttctggcagtttggtgagtgggtggatgttgtcattgacgatcggctgccggta
aaagatggtgagctggtttttgttcactccgccgagggaaacgagttctggagcgccctg
ctggagaaggcctatgctaaggtaaacggctgttatgaagctctatctggaggatcaacc
agtgagggttttgaggatttcaccggaggaatcgctgaaaactacgagctgcagaaagct
ccatccaacatgtttcagatcatccagaaagccctggaggctggagctttgctgggctgc
tccatcgacatcactagtgcctctgattcagaagccgtcacccgtcagaagcttgtgaaa
ggccacgcttattcgctcacaggggcgaccgaggtgaactatcgtggccgtaaggagaag
ttggttcgtatgcgcaacccatgggggcaggtggagtggacaggagcctggagcgatagt
tcatccgaatggaacagtattcccgcttcagagcggcccaacgcaagcgctgaggatgga
gaattctggatgtcattctcagaattcttaagccattactctcgtatagagatctgcact
ctgactccggacgccatcaccagcgattcgtataaacactgggccgtcaccaaccacgac
ggcacgtggaggagaggctccactgctgggggatgcagaaacaacgcttacacattctgg
atgaatccccagtatgtgattaaactgaatgaagaagatgacaatccagatgataatgag
gtgggctgcagtttcgtggtgggtttgatccagaagaaccggcgccggctgaggaaatca
ggagaggacatgcacactattggctttgccatttatgagttaccttcacagtttcacggt
cagcgcgacgtgcacctcgataagaacttcttcctgacgcatgcgcagaaagctcgctct
gagactttcgttaacctgagggaggtctgcacacgcttcaagctgcccccaggagagtac
ctcgtcgtgccgtccaccttcgaacccaataaggacggagacttttgtctgcgtgtcttt
tctgaaaaacagaccgaaacactaccatgtgatgaccctgtggatgccgaattacctgat
gagactgtctcagacgctgaagtcgattctgggttcagaggcatgttcacaaaactcgct
ggagctgacatggaaatctcagccacagagctcaccactatcttaaacaaaatcattgca
aaacgaactgacataaagacagacggcttcagtttggagacaagtcgtatcatggtgaac
ctcatggatgacagtgggaatggaaaacttggtttgggagagttcgcaaccctgtggaag
aaaattcagcgataccttggaatttacaagaagaatgacatggataattcaggaaccata
agcactccagaaatgcgcatggcgctgaaagaagccggtttcactctaaataacactata
tttcaactattggtagcacgttatgctgaaacagacatgactcttgactttgataacttc
gtggcctgcctcatgcgtctggagatgatgttccgggtattcaaaaagctggatccccac
caaagtggcttcattgagctggactttcagcagtggctgaacttcactatgatttag
DBGET
integrated database retrieval system
