Garra rufa (doctor fish): 141340294
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Entry
141340294 CDS
T11039
Symbol
aaas
Name
(RefSeq) aladin
KO
K14320
aladin
Organism
grf Garra rufa (doctor fish)
Pathway
grf03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
141340294 (aaas)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
grf03019
]
141340294 (aaas)
Messenger RNA biogenesis [BR:
grf03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
141340294 (aaas)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_WDHD1_1st
WD40
ANAPC4_WD40
Beta-prop_EML_2
WD40_CDC20-Fz
Beta-prop_RIG_2nd
Beta-prop_IFT140_1st
WD40_Prp19
Beta-prop_WDR19_1st
Beta-prop_CAF1B_HIR1
eIF2A
Beta-prop_WDR35_TULP_N
SGL
Motif
Other DBs
NCBI-GeneID:
141340294
NCBI-ProteinID:
XP_073701321
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Position
8:complement(2207373..2239206)
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AA seq
502 aa
AA seq
DB search
MCSLSLFPVPVTAGHTLYEHNNELVPGHPIKQPYDLPSPQFTRDTLKGHSRPESSSKSAF
LDQRDTLWMRSAGAWRDAGLYGLLDEITNSAEEVPRFLAVGSACFLALLRWASSFHGSLF
PHLTLSSDEMVAEFSQMLDWSDSAMRSFAWHPHTDKFAVALLDDSIKIYKSHSSTTPTLK
HRCQRSVCALQWKPLCGSALAVACQSCLLIWHVDPTSLSTRPSSGCAQVLSHPGHSPITS
IAWSPTGSLLVSASPVDTSMMVWDVAAESCVPLQRVGGGGVTYLSWSPDGSRLLAATPSA
LFRVWETRMWTCERWPCLKGSCQSACWSPDGGCLLLSIQGERVIYALTFSDLTGGPKAAT
VVADLSETTFPGPDGDLTVGGEVCSLSWDPRGERLAVLLKGDSQAGNHPSVIAVFKTRSS
PVFELLPCGFVMGEAGAEPRFMQFHPHFQHGALLTVCWSDGRISHVPFYFSSAGLLGDSP
QQALASSATDHSSNKLYTELIS
NT seq
1509 nt
NT seq
+upstream
nt +downstream
nt
atgtgttctctcagtctgttcccggtgccggtaacggctggacacacgctgtacgagcac
aacaatgagctggtgcccggacatcccatcaaacagccgtatgatctgcccagtcctcag
ttcaccagagacactctgaagggtcacagtcgtccagagagcagcagtaaatcagctttt
ctcgaccagagagacacactgtggatgaggagcgctggagcctggcgtgatgcaggcctg
tacggtctgttagatgaaatcactaacagtgcagaggaagtgcccaggttcttggccgtc
ggatctgcctgtttcttggctctgttgagatgggcttcttcattccacggctctctgttt
ccacatctgactttgagcagtgatgagatggtggcagagttttcacagatgctggattgg
tctgacagcgctatgagaagcttcgcctggcatcctcacactgataagtttgcagtagcc
ttactggacgactccatcaagatttacaaatctcacagttcgacgacgccgacgctgaag
caccgctgtcagaggtcagtgtgcgctctgcagtggaagcctctgtgcggctctgctctg
gctgtggcgtgtcagtcgtgtctgctcatatggcatgtggaccccacctcgctctccacc
aggccatcgtccggctgtgcgcaggtcttgtctcatccgggtcattctcccatcacatcc
atcgcttggtcaccaaccggctctctgctcgtgtctgcatctcctgtggacacatccatg
atggtgtgggatgtggcagcagagagctgtgtgccgctgcagcgggtgggtggtggcggc
gtcacgtatctctcatggtctccagacggcagtcgactgctggcagccacaccatctgct
cttttcagggtttgggagacgcgcatgtggacatgtgagagatggccgtgtctgaaaggc
agctgtcagtcggcctgctggagtcctgacggtggctgtctgctgttgagtattcaggga
gagagggtcatctatgcgctcaccttctctgatctcacaggtggtcctaaagccgccacc
gtagtggctgatctctccgaaaccaccttccccggacctgatggggacctcactgtcgga
ggagaggtgtgctctctttcatgggatccgagaggtgaaagactggccgttcttctgaaa
ggtgattcacaggccggtaatcacccatcggtcatagccgtctttaaaacacgctccagt
ccagtgtttgagttgctgccatgtggttttgtgatgggcgaggctggagcagagcctaga
ttcatgcagttccatccgcacttccagcacggcgctctgcttactgtgtgctggtctgat
gggcgcatctctcacgtgccgttttacttcagcagcgctgggcttttaggagactcgccg
cagcaagccctcgccagcagcgcaacggatcattcttcaaacaaactctacactgaactt
atttcctga
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