Garra rufa (doctor fish): 141340327
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Entry
141340327 CDS
T11039
Name
(RefSeq) guanylate-binding protein 4-like
KO
K20899
guanylate-binding protein 1/3/4/7
Organism
grf Garra rufa (doctor fish)
Pathway
grf04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
141340327
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GFIT
Motif
Pfam:
GBP
GBP_C
RHD3_GTPase
MMR_HSR1
DUF2682
DUF4407
Motif
Other DBs
NCBI-GeneID:
141340327
NCBI-ProteinID:
XP_073701358
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Position
8:1251646..1265819
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AA seq
645 aa
AA seq
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MDKPVCLIETASDGKLFVQQSALQVLEQIQQPVVVVAVVGLYRTGKSYLMNRLAGKQTGF
ALGSTIESKTKGIWMWCMPHPTKPETTLVLLDTEGLGDVDKGDSKHDTKIFSLSVLLSST
LVLNSQGTLDNRAIEELQYVTELTEYIKIKSSNEDEEDSEFVKFFPNFIWAVRDFTLEQK
INGKHVTEDQYLEFALKLKPGTSRTVNEFNLPRQCIRNYFPSRKCFTFPFPTTPENVSRL
ESLDPADLSPEFQEVTEHFCKFVFDRSEVKKLKDGYTVTGRVLGHFAKTYVDTISSGEVP
FLENAVIAMAMIENEAAVKEGLEVYQNGMEKLKNSFPLELKEVSSEHQCLSRIATQVLMK
RSFKDSEGTYLKSLEEGINKLFQGYLCQNEEASKKRCENILSSLSGTMTEKLKKGFYAIP
GGYVLFSQDLEDIVKKYKIQANKGVKAEDTLEEFLKKKSVESNAILQADNKLTEKEKKIM
EEREKAILLAQEINTKEEKQRQLEEKMEAERRGNEETMIQMKKKMGEEMRLQREEAERAM
DSKLREQAALLEKGFKEKADRMSDEIEDFRRKNKNAEKESDKLFKKMISNMNKRHTETVN
LMKRQHSEQMEAIMSMPKPSSDFPNLVLRLLLVGVSSLAGGPCPT
NT seq
1938 nt
NT seq
+upstream
nt +downstream
nt
atggataaaccagtgtgtttgattgagacggcgtccgatgggaagctgtttgtccagcag
tcagcgttgcaggttctggagcagatccagcagcccgtggtggtggtggccgtggtgggt
ctctaccgcaccgggaagtcctacctgatgaatcgactggcaggaaaacaaacagggttt
gcactgggcagcacaattgagtccaagacgaagggcatctggatgtggtgtatgcctcac
cccactaaaccagaaaccactctggtgctgctggacaccgagggactcggggatgtggac
aagggggactcgaagcatgataccaagatcttttctctatctgtccttctgagtagcact
ctagtgttgaacagccaggggacgctcgacaacagagctattgaggaactgcagtatgtc
acagagttaacagagtatatcaagatcaaatcatctaatgaggatgaagaggactcagag
tttgtcaagttcttccccaatttcatctgggccgtgagggacttcacccttgaacaaaaa
ataaatggcaaacacgtgaccgaggaccaatacttggaatttgccttaaagttgaaacca
ggcacttcaagaacagtcaacgagttcaaccttccacggcaatgtatccgaaattatttt
ccatcccggaagtgttttactttccctttcccgactaccccagagaatgtgtctcgtctg
gagagcctggatccggctgacctttccccagagttccaggaggtcacagaacatttctgc
aagtttgtctttgacaggagtgaagtgaagaagctaaaggatggatacacagtcactggc
agagtcctgggtcactttgcgaagacgtatgtagacacgatttccagcggggaagttcca
tttctggagaatgctgtgatcgccatggcaatgattgagaatgaggctgcggtgaaggaa
gggcttgaggtgtaccaaaatggaatggagaagctgaagaactccttccctctggaactg
aaggaagtatcatctgaacaccagtgcctcagcaggattgcaacacaggtcttaatgaag
cgttcctttaaggacagcgaggggacatacctgaaatctctagaggaaggcattaataaa
ctctttcaaggatacttgtgtcaaaatgaagaggcttcaaagaaaagatgtgagaatatt
ctgtcatccctctctggaacaatgacagagaagctcaagaagggattctatgccatacct
ggtggttatgttctcttctcccaggaccttgaagatattgtgaagaaatataaaatccaa
gccaataaaggagtcaaggcagaagacacacttgaagagtttctgaagaagaagtcggtg
gagtctaatgcaatcctgcaggctgacaataaactgacggagaaggagaaaaaaattatg
gaggaaagagagaaggccattctcctggctcaagaaataaacaccaaggaagagaagcag
cgacaactagaagagaagatggaagcagagagaaggggtaatgaagagacgatgatacag
atgaagaagaagatgggcgaggagatgaggcttcagagagaggaggccgagcgtgccatg
gacagcaaactgagggagcaggctgctttgttggagaagggctttaaggagaaggctgac
aggatgtctgatgagattgaggacttcaggaggaagaataaaaatgcagagaaggaaagt
gacaaactgtttaaaaagatgatatcaaacatgaacaaaagacacactgagacagtgaat
ctgatgaagaggcaacacagcgagcagatggaggcaatcatgagcatgccgaagccttca
tctgattttcccaatttagtcttacgtctgctactcgttggtgtcagcagccttgccggt
ggcccatgtcccacttaa
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