Garra rufa (doctor fish): 141340328
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Entry
141340328 CDS
T11039
Name
(RefSeq) guanylate-binding protein 4-like
KO
K20899
guanylate-binding protein 1/3/4/7
Organism
grf Garra rufa (doctor fish)
Pathway
grf04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
141340328
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GFIT
Motif
Pfam:
GBP
GBP_C
MMR_HSR1
RHD3_GTPase
PH_25
nSTAND_NTPase4
Motif
Other DBs
NCBI-GeneID:
141340328
NCBI-ProteinID:
XP_073701359
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Position
8:1235138..1243640
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AA seq
629 aa
AA seq
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MDKPVCLIETASDGKLFVQQSALQVLEQIQQPVVVVAVVGLYRTGKSYLMNRLAGKQTGF
ALGSTIESKTKGIWMWCVPHPTKPETTLVLLDTEGLGDVDKGDSKHDTNIFCLAVLLSST
LVYNSRGTIDNRAVEELQYVTELTECIKVKSSDEDVDDSNEFVKFFPSFIWAVRDFTLER
KIDGKDATENDYLEFALKLKLGTSKKVMEHNLPRECIQKFFPSRTCFTFPFPTAPENVSL
LERLDPADLSSEFLEVTERFCKFVFDKSDVKKLKDGYTVTGRVLGHLAKTYVDTISSGAV
PCLENAVIAMAMIENEAAVKEGLEVYQSGMEKLKNSFPLELKVVSTEHQRLSSIATQTFM
TRSFRDTDGKYLKSLEEKVNKLFDGYLCQNEQASKKRCEDLLSSLSATMTENLKQGVYAK
SGGYDLFCTDLEDIVKKYNSQTKKEVKAESVLEEFLKQKSVDSKAILQADKKLTEKEKKI
KEETEKAVLLEQEIKAKEETQRQLQEKMEAERQSNEERMRQMKEKMDEEMRLQREEAQRA
MDSKLREQAALLEKGFQEKADRMSQEMEEFKRQNTEAESNRAREFAELLENSNKRHEESM
GLMMKQHSEQMKALQQQMSRRPSGGCSIL
NT seq
1890 nt
NT seq
+upstream
nt +downstream
nt
atggataaaccagtatgtttgattgagacggcgtctgatgggaagctgtttgtccagcag
tcagcgttgcaggttctggagcagatccagcagcccgtggtggtggtggctgtggtgggt
ctctaccgcaccgggaagtcctacctgatgaatcgactggcagggaaacaaacagggttt
gcattgggcagcacaattgagtccaaaacgaagggcatctggatgtggtgtgtgcctcac
cccactaaaccagaaaccactctggtgctgctggacactgagggactcggggatgtagac
aagggggactcgaagcatgacaccaacatcttctgtctggctgtgttactgagcagcact
ctggtctacaacagtcgagggacgatcgacaacagggctgtagaggagctgcaatatgtt
acagaactaacagagtgcatcaaggtcaaatcatcagacgaggatgttgatgactcaaat
gagtttgtaaagttcttccctagtttcatctgggctgtgagggacttcactctggagcga
aagattgatggcaaagatgcaacagagaatgattatctagagtttgctctgaagctgaaa
cttggcacttcaaaaaaagtgatggagcataatcttcccagggagtgcatccaaaaattc
ttcccctccaggacatgcttcactttcccgtttccaaccgccccagagaatgtgtctctt
ttggagaggttggatcctgctgacctttcctctgagttcctagaggttacagaacgtttc
tgcaagtttgtctttgacaagagtgatgtgaagaagctgaaagatggatacacagtcact
ggcagagttttgggtcatttagcaaaaacttatgttgacaccatctccagtggggctgtg
ccgtgtctagagaacgctgtcatcgccatggcaatgattgagaacgaggctgcggtgaag
gaggggcttgaggtgtaccagagtggaatggagaagctgaagaactccttccctctggaa
ttgaaggttgtgtccacagaacaccaacgtctcagcagcattgcaacacaaaccttcatg
actcgatcattcagggacactgatgggaagtacctgaaatctctggaggaaaaagttaat
aaactctttgatggatacctgtgccaaaatgagcaagcttcaaagaaaagatgtgaggat
ctcctgtcatccctttcagcaactatgactgaaaacctcaaacagggcgtctatgctaaa
tctggtggctatgatctcttctgcacggatctggaggacattgtgaaaaaatacaacagc
cagaccaaaaaagaagtcaaggctgaatcggtcttagaggagtttctgaagcagaagtct
gtggattctaaagctattctgcaggccgacaaaaaactgactgagaaggaaaaaaagatt
aaagaggaaacagagaaagctgtactccttgagcaggaaatcaaagctaaagaggagaca
cagcgacagctacaagagaaaatggaagcagaaagacagagtaatgaagagaggatgaga
cagatgaaggagaagatggatgaggagatgaggcttcagagagaggaggcccagcgtgcc
atggacagcaagctgagggagcaggctgctctgctggagaagggctttcaggagaaggct
gacaggatgagccaggagatggaagagttcaagagacagaatactgaagctgagagtaac
agagctcgagagtttgcagagctgttagagaactccaacaagagacatgaggagtctatg
ggtttgatgatgaagcaacacagtgaacagatgaaggctttacagcagcagatgagtagg
cgcccttctggaggatgttccatcttgtaa
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