Garra rufa (doctor fish): 141340358
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Entry
141340358 CDS
T11039
Symbol
plcd4b
Name
(RefSeq) 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase delta-4
KO
K05857
phosphatidylinositol phospholipase C, delta [EC:
3.1.4.11
]
Organism
grf Garra rufa (doctor fish)
Pathway
grf00562
Inositol phosphate metabolism
grf01100
Metabolic pathways
grf04020
Calcium signaling pathway
grf04070
Phosphatidylinositol signaling system
Module
grf_M00130
Inositol phosphate metabolism, PI=> PIP2 => Ins(1,4,5)P3 => Ins(1,3,4,5)P4
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00562 Inositol phosphate metabolism
141340358 (plcd4b)
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
141340358 (plcd4b)
04070 Phosphatidylinositol signaling system
141340358 (plcd4b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
grf04131
]
141340358 (plcd4b)
Enzymes [BR:
grf01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.11 phosphoinositide phospholipase C
141340358 (plcd4b)
Membrane trafficking [BR:
grf04131
]
Exocytosis
Calcium ion-dependent exocytosis
Phospholipases
141340358 (plcd4b)
Endocytosis
Macropinocytosis
Phospholipase C
141340358 (plcd4b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PI-PLC-X
PI-PLC-Y
EF-hand_like
C2
EF-hand_10
EF-hand_1
PH_12
EF-hand_7
PH
EF-hand_5
EF-hand_6
GDPD
EF-hand_8
EF-hand_15
AIF-1
Motif
Other DBs
NCBI-GeneID:
141340358
NCBI-ProteinID:
XP_073701389
LinkDB
All DBs
Position
8:complement(33279236..33290779)
Genome browser
AA seq
744 aa
AA seq
DB search
MESPQACCEQGHPNLEAMKAGMFLRKVKSRMWKRQRHYKLQEDCKTIAYKSSWAINSYST
FSISDVEAVREGHKSEALLSVADEFTADRCFTLVFRGRKGNLDLVADSAEEAQAWIQGIR
ALMEDMENMDESTKIDQWISDWFMKADLNKDGRINFKEAKKLLKMMNVDMNEEHACCLFM
MADKSKSGTLEDQEFVEFYKMLTERTEVLDLFQDYSSDGQSLSQCDLEEFLREEQLEGEG
SYEHALQLIEHYEPSDTARMNHSMSIDGFLMYLTSPEGSIFNLERQGLFQDMSQPLAHYY
ISSSHNTYLMEDQLKGPSSVEAYIQALKRGCRCVEVDCWNGANGEPVVYHGHTLTSKILL
KDVISTIANYAFKASDYPLIVSIENHCSIEQQEVMARYFRDILGDMLLTNTVDGVSSELP
SPEALKRKILLKGKKIRNESESPTGEVSDEDEAAEMNKDSPASESPPTDGKKSKQNLCKE
LSDLMFCRSVHFHSFEHSRTSAKPSEMSSFSESKARKYSKEAGLDFALHNTRQLTRVYPS
GMRTDSSNYCPVDMWNTGCQIVALNFQTAGLEMDLNDGLFTQNGCSGYILKPEILCKRER
LFNSENPEEREDYHPLLLYVKVISGQQLPKVKQKDWSIVDPLVRVEIYGVPLDQAKQETK
YIDNNGFNPLWNETLQFKIHTPELALVRFVVEDYDKASRNDFIGQYTLPFTCIQPGYRHV
HLLSKDGTSIHPSSIFVHIQIKEL
NT seq
2235 nt
NT seq
+upstream
nt +downstream
nt
atggaatcacctcaagcatgctgcgaacagggtcatccaaaccttgaagctatgaaagcc
ggcatgtttctgcgcaaggtgaaatctcgtatgtggaagcgtcagcggcactacaaactt
caggaggactgcaagactattgcatataaatcaagctgggcaataaactcttattctacc
ttctccatcagtgatgtggaggctgttcgtgagggacataagtctgaggcgcttctcagt
gtggcagatgagtttactgctgaccgctgtttcactctggtgtttcgtggccgaaaagga
aacctggacctggtggctgattcagcggaggaagcacaggcctggattcagggcatcaga
gccctcatggaggatatggagaacatggatgagagcaccaaaattgaccaatggatctca
gactggtttatgaaagcagatctaaacaaggatggaagaattaattttaaggaggcaaag
aaattactgaaaatgatgaacgtggacatgaatgaagaacatgcatgctgtcttttcatg
atggccgataagtctaagtcaggaaccctggaggatcaggagtttgtggagttctataaa
atgcttactgagagaacagaggtgctggacttattccaggattattccagtgatggacag
agtttatcccagtgtgatttggaagagttcctgagagaggagcagctagagggggagggc
agttatgaacatgcccttcaactgattgagcactatgagccttcagatacagccagaatg
aatcactcgatgtcaatcgatgggttcctaatgtacctgacgtctcctgagggatccatc
ttcaatctagagaggcaaggcctttttcaggacatgagtcaacctcttgcccactattat
atctcctcatcacacaacacttatctgatggaggaccagctaaaaggaccaagtagcgtt
gaggcctacatccaggcacttaaaagaggctgcaggtgtgttgaagtggattgctggaat
ggagcgaatggggagccggtagtttaccatggacacactctgacatctaagattctcctc
aaagatgtgatttctactattgcaaattatgccttcaaggcatctgactatccactcatc
gtgtccattgaaaaccactgcagcatagagcaacaggaagtcatggctcgatatttcaga
gacattctaggtgatatgctactgacgaacacagtagatggagtctccagtgaactgcca
tccccagaggcacttaagagaaaaatcctgttgaaaggaaagaagattagaaacgagtca
gagagccccacaggtgaagtcagcgatgaggacgaggcagcagaaatgaataaggacagt
ccggcatcggagagtccaccaacagatggcaagaaatcgaagcaaaatctatgcaaggag
ctctcagacctaatgttctgtaggagcgtacatttccacagcttcgaacattcccgcacc
tctgctaagcccagtgagatgtcatctttctctgagtctaaagcccgtaaatattcaaag
gaagcaggtttagattttgcactgcataatactaggcagttgacaagagtgtatccaagt
ggaatgagaacggattcatcaaattactgtccagtggacatgtggaacacgggatgccag
attgtggccttaaacttccagacagcaggattggaaatggatcttaatgatgggttgttt
actcagaacggctgtagtggctacatcctaaaacctgagatcctttgcaaaagagagaga
ctctttaattctgaaaatcctgaggaacgtgaagattaccaccctctattgttatatgtt
aaggttattagtggacaacagctccctaaagtaaagcagaaagattggtccattgtagac
cccctggtaagggtggaaatttatggtgttcctttggaccaagccaaacaggagaccaaa
tacattgacaacaatggattcaacccactttggaatgaaaccttacagttcaaaatccac
acccctgagctggcactggtgcgttttgttgttgaagactatgataaagcatcaaggaat
gacttcatagggcaatacactctacctttcacctgtattcaaccaggatatcgtcatgtg
catctgttgtccaaagacggaacaagtatccatccatcctccatctttgttcatatccaa
atcaaagagctgtaa
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