Garra rufa (doctor fish): 141340390
Help
Entry
141340390 CDS
T11039
Name
(RefSeq) cohesin subunit SA-2 isoform X1
KO
K06671
cohesin complex subunit SA-1/2
Organism
grf Garra rufa (doctor fish)
Pathway
grf04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
141340390
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
grf03036
]
141340390
Chromosome and associated proteins [BR:
grf03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
141340390
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HEAT_SCC3-SA
STAG
SCD
Cnd1
AAA_lid_5
HEAT_MROH2B_C
DUF3124
WipA_N
Motif
Other DBs
NCBI-GeneID:
141340390
NCBI-ProteinID:
XP_073701441
LinkDB
All DBs
Position
8:complement(36500580..36530256)
Genome browser
AA seq
1172 aa
AA seq
DB search
MIAEPTLLSRSVQKENSVVDVSSCASVHHGSSERNENIQKTVRGKRKARECSENAKRKHS
KSSNGSLGRAENEQLKNGDVEAVTLFEVVSMGRGAMQAVVDDWIDAYTGDRDTALLDLIS
FFIQCSGCKGMVTAEMFQSKKGTDVMSKMVEDLDEDTGLQYKKFLAFPWILTVTWPLDMD
SGEYPLIMSGLYWKRFRSHFCEFVSVLVAQCQNCVIFDGYLLNILISLLTELSDSRVRAF
RHTCTLAAVKLLSALVNVALNLSVSVDNSQRLYEVELAKMASKRASPRLDRIQRKISELQ
DRKFEIENMMDAIFKGVFLKRYRDVIPEIRAICMEELTVWMKLYSSVFLNDSYLKYVGWM
MHDKQPDVRLKCVLGLQALYQDQSSSKMDLFTIRFKERMISMTLDKDHEVAIQAMRLLMV
ISQSCEDVLSPDDHKNVFQFVYCSHRPLATTAGEFLYNRLLSNPELSRPRYGATDQERHR
ELVLARVRALIHFHTESELHQHVLYLVDSLWDRAGALLKDWTGLTSLLLPQTSCQEQALS
SAEEAFVIELMLASVRQAAEGPPLSGRGAGKKVISTKEKKSQIDDCTKLTGHFIKVLPEL
LSKYSADADADKLTSLLKIPQYFQMDTCDHENSQCVQALLAELEAAVGRHKDAGLLETAA
RSYQSLCAQDSPWHSLARPSFDRLIQHWTDTLGTQLAESLSDGCFTANKDSTLEILSTLK
KLNMFNIAQDPSKWSLFELGTRLLDVEIKHGGLPMEVTTEALRCMCSCILWKLNTFGEGV
TSRESALQQRSQLRAFCEKCHRCLSHAEQLVREQAFMCLSDVLIAHNYQLQMWDSSAGTP
LLYTPDPKLQKALLSFVAEHVFTSPEQDSHSSKVSESESGDGRLEDLHRRRNLLAAYCKL
IVHSVLEMSMAAEVFKQYVKYYNDFGDIIKETLNRTRQMDKIESARTLVQCLQQLYLRLK
QEQDRGNTCSSRVQTYSSIKELARRFSLTFGWDQIKSRESLAMIHRDGIEFVFKGFVQQS
EKHSPPYVSYLTILSEFSSKLLKPDKKTIYSYLQKFAGEQVISNREESWMPLIYYRASLM
GTAEGEDAVSFISSDTNKQPSITNRSRSPSVKQLNSEGDQRFLSPSSEPKGNKLLKGSEA
LLSREQLTSSLVSAKGPRSIEEVDVDTVDIDV
NT seq
3519 nt
NT seq
+upstream
nt +downstream
nt
atgatagcagagccaactttactgtccagatcggtgcaaaaagagaactcagtagttgac
gtctcttcctgtgcatcggtgcatcacggctcaagtgagagaaatgaaaacatacagaag
actgtgagaggaaagaggaaagcccgggaatgctctgagaatgccaaacgaaagcattcg
aagagcagcaatggcagcctgggcagagcagagaacgaacagctcaaaaatggagatgtg
gaagccgtcacactgtttgaggtggtcagcatgggcaggggtgccatgcaggctgtggtg
gatgactggattgacgcatatactggcgacagagacacagcattgctcgatctcatcagc
ttctttatccagtgttcaggatgcaaagggatggttacagcagagatgtttcagagcaaa
aagggtactgatgtcatgagcaaaatggtggaggatctggatgaggacacaggtttacag
tacaagaagtttcttgcattcccttggattttaactgtcacgtggcctcttgacatggac
agtggcgagtatcccctcatcatgtctgggctgtactggaagaggtttcgttcacacttc
tgtgagttcgtatcggtgctagtggcccagtgtcagaactgtgtaatctttgacggctac
ctcttgaacatactcatttcactgctgacagagctctccgattccagagttcgcgctttc
aggcacacctgtacgctagcagcagtgaagctgctcagcgctttggtgaatgtggctctc
aacctcagtgtcagtgtcgataacagtcaacggctgtacgaggtcgagctggccaagatg
gccagcaaacgggcttctccgcgactggacaggatccagagaaagattagtgagttacag
gacaggaaatttgaaattgagaacatgatggatgccattttcaaaggagtcttcctgaaa
agatacagagacgtgattcctgaaatcagggccatctgcatggaggaactgacggtgtgg
atgaagctgtatagttcagtgtttctgaacgacagctatctgaagtatgtaggatggatg
atgcatgataagcaacctgatgtgcgtctgaaatgtgtgctgggtctgcaggcactttat
caggatcaaagtagttccaaaatggaccttttcacaatacggtttaaggagcggatgatt
tccatgactctggataaagaccatgaagtggccatacaggccatgagattgctcatggtc
atctctcaatcctgtgaggatgttctgagtcctgatgaccacaagaacgtcttccaattt
gtgtactgctcccacagacctctagctaccactgcgggtgaattcctctataacaggctg
ctcagtaaccctgaattatcaaggcccagatatggagccaccgatcaggagagacacaga
gagttagtcttagccagagtccgagcccttatccactttcacactgagagcgagttgcac
cagcatgtgctgtacctcgtggatagtctgtgggacagagcaggagctctgctaaaggac
tggaccggtcttacctcactgctcttacctcaaacgtcctgtcaggaacaagctctgagc
agtgctgaggaggcctttgtgatcgagctcatgttggcttcagtgagacaggctgcagaa
ggtcctccattgtcagggagaggagcaggtaaaaaggtgataagtactaaagagaaaaag
tcacaaattgatgactgcacaaaactcactggacacttcattaaagtgctgcctgagctg
ttatccaagtactcagctgatgcagatgctgataaactgacctcccttctaaaaatacct
cagtatttccaaatggacacctgtgatcatgaaaactcacagtgtgtgcaggcattgctg
gctgagttggaggctgcggtgggcagacacaaagacgctgggctgctggagacagctgcc
cgttcataccagagcctctgtgctcaggattcaccctggcactctctggcccggcccagc
tttgaccggctcatccagcactggacagacacactgggcacacagttagcagaatcactg
agtgacggttgtttcactgcaaacaaggacagcactttggaaattctgtccacactgaag
aaacttaatatgttcaacattgctcaggatccgtccaaatggagcctgtttgagctgggg
accagactcctggatgtggagataaaacatggtggccttcccatggaggtgacaactgaa
gctctgcgctgcatgtgtagctgcattctttggaagctcaacacctttggagaaggtgtg
acctccagggagtccgccctccagcagagaagccagctacgtgccttctgtgagaaatgt
caccgctgtctctcgcacgctgagcagcttgtacgagagcaagccttcatgtgtctgagt
gatgttctcatagctcataattaccagcttcagatgtgggattcgtctgcaggcactcca
ttgctgtacacccctgatcccaaactccagaaagctcttctttccttcgtcgcggagcat
gtcttcaccagccctgagcaggactcccacagtagtaaagtcagtgagagtgagtctgga
gacggacggctggaagacctgcatcggcggaggaatcttctggccgcatactgcaagctc
atagtgcacagtgtactcgagatgagcatggctgctgaggttttcaaacagtatgtgaag
tactacaatgacttcggcgacatcatcaaagagaccctgaacaggacacggcagatggac
aagatcgaaagcgcacgcacgctggtgcagtgccttcagcagctatatctgaggctgaaa
caggagcaggacagaggaaacacatgcagctccagggttcagacctacagcagcatcaag
gagctggccagacgcttctcactcacctttggatgggaccagatcaaatcccgcgagtcc
ctggccatgattcacagggacggaattgaatttgttttcaaggggttcgttcagcagtct
gagaaacactctccaccatacgtatcatacctcaccattctcagcgaattctccagcaaa
ctgctcaaaccggacaagaagaccatttatagttatttgcagaagtttgctggtgagcag
gtcatcagcaacagagaggagagctggatgccgctgatttactacagagcgtctctgatg
ggcacggctgagggagaagatgctgtgtccttcatcagctctgataccaacaaacagccc
tctatcaccaaccgctccagatcaccctctgtcaaacaactcaactctgaaggggaccaa
aggtttctttccccctcttcagaaccaaaaggaaacaagcttctgaaaggttctgaagcc
ctactgagcagagagcagctgaccagcagtctggtgtctgctaaaggtccaaggagcatt
gaagaagtggacgtggatactgtagatattgatgtctaa
DBGET
integrated database retrieval system
