Garra rufa (doctor fish): 141340407
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Entry
141340407 CDS
T11039
Symbol
zeb2a
Name
(RefSeq) zinc finger E-box-binding homeobox 2a isoform X1
KO
K23560
zinc finger homeobox protein 2
Organism
grf Garra rufa (doctor fish)
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
grf03000
]
141340407 (zeb2a)
Transcription factors [BR:
grf03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ZF
141340407 (zeb2a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
zf-Di19
zf-C2H2_jaz
zf-C2H2_6
Homeodomain
zf-met
zf-C2H2_15
Zf-C2H2_ZNF451_C
zf-C2H2_2
zf-C2HE
Motif
Other DBs
NCBI-GeneID:
141340407
NCBI-ProteinID:
XP_073701463
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All DBs
Position
8:26301460..26356807
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AA seq
1226 aa
AA seq
DB search
MKERSPCGLLPSDPLLSMKQEIMAEGPRCKRRKQANPRRKNVLSYENVVDAGSGSDEEDR
LLGSEGEGSPAGVPSLEASPRVAHALLSCRGDEENESQDGAGAHVWRHGDLNGSEERKAE
YNSMSPNLSLHGIGNGTVKGIDASSELERFLDKRKLDDSEGHAASIAEYLQDTVIIYPED
PEEGTRLGTPEANGQDENENDLALRTPDAFAQLLTCPYCDRGYKRLTSLKEHIKYRHEKN
DESFPCPLCSDTFAYRTQLERHMATHKPARDQPQLLNEGAGNRKFKCTECGKAFKYKHHL
KEHLRIHSGEKPYECSNCKKRFSHSGSYSSHISSKKCIGLISINGRVRHGVNSKPGSSPN
SAASSPGSPALAQLRHKLENGRSMSLQDPSAHPDIKSEPMDFNEYRLMIASQQEYGGSGA
FLNGGGHGGSPPGMHGSSQNPQQHLGIGSDPHPFSYPGILNNMSEVQKVLQIVDNTVCRQ
KMDGNPEEISKLRAYMKELGSQMEEQNRILASQQGFLGVGHNSPTKTIIDYTLEKVNEAK
ACLQSLTEDSKRRPVDIKKERPSHAMDLLSEDKAQERDAQYAPFSCQYCKETFSGPIPLH
QHERYLCKMNEEIKAVLKPNDTVPTGRRGLFGSEQQAGVIPSSLERNATSPVNLYKDHMS
VLKAYFAMNTEPNSEELRKISMAVGLPQEFVKDSFVQWKAQSHHSFSRKRSPPPERSGEI
NHGLSRESAFARSPVSLSQYGDSTAEIQALTNGDSGHKLSKLHQFTGIRQTNEKPLDSVD
HLRGETPSPLNLSSSSSKHSHSSSYTPNSLASEDAHGEPLDLSLPKHVSKAERRPKPNGF
SVDHTINSSAREPGTEPLNLAHIKKEFNGPSSLGNENQLEKSSSPIFSINPFGGGHMYTS
LPPHGAFPPPTFMSTAQASIPGLRPYSGLDPMSFLPPMAYTYAAGAATFVEMQQRRKYQR
KPGFQGELLDSAGDYLSGLEDLTDSESLLARKKIKKTESGMYACDLCDKTFQKTSSLLRH
KYEHTGKRPHQCQICKKAFKHKHHLIEHSRLHSGEKPYQCDKCGKRFSHSGSYSQHMNHR
YSYCKREAEEREAAKQDSHDNGGPLEPTELLMRRAYLQGLGPLGFSDPEDQTEDITRENT
ILRDGTEGGAREAEEAYPEVTDRQETRLAEEEEMETEGQRFDIGSPDGTAKDEKESEVMG
GTEDESSEEGKPASKRNPDGENEDAD
NT seq
3681 nt
NT seq
+upstream
nt +downstream
nt
atgaaggagcggagcccatgcggactgctgccatctgacccactcttatcaatgaagcag
gagatcatggcggagggtccccggtgtaagaggagaaaacaggccaacccgaggagaaag
aacgtgctgagttatgaaaatgtggtggatgccggttcagggtccgacgaggaggacaga
ctccttggttctgagggcgaaggcagtccagcaggtgtgccgagtctggaagcctcaccc
cgggtagcccatgccctgctctcctgccggggagatgaagaaaatgaaagccaggatggg
gcaggagcccacgtctggcgccacggagacctgaatggttcagaggagcgaaaagctgag
tacaactccatgagccctaacctctctctccatggaattggaaatggtacagttaagggt
attgatgcatcttcagagctcgaaaggttccttgacaagaggaaactggatgacagtgag
ggacatgcagcaagcattgccgaatacctgcaggatactgttattatttaccctgaggac
ccagaggaagggacacggctgggcacgccagaggctaatggacaagatgaaaatgaaaat
gatctggcactgaggacgccagatgcctttgcccaactgttgacctgcccctactgtgac
cggggctacaagcggctgacctccctaaaggagcacatcaagtaccgacatgagaaaaac
gatgagagcttcccctgtcccctgtgcagtgacaccttcgcctaccgcacccagctagag
cgccatatggccacgcataagcctgccagagatcagcctcaactgctaaacgaaggggcc
ggtaaccgcaaattcaaatgcacagagtgcggcaaagccttcaaatataagcatcatttg
aaggagcacctccgcattcacagtggtgaaaagccatatgagtgctccaactgcaagaaa
cgcttttcccactctggctcctacagctcccacataagtagcaagaaatgcattggtctt
atctctattaatggacgggtacgccatggagtcaacagcaagcctggctcttcaccaaac
tctgctgcttcctcccctggcagtcctgccttagctcagctccgtcacaaactggagaac
ggcaggtccatgagcctccaagacccatctgctcacccagacatcaagtcagagcccatg
gacttcaatgaataccgtcttatgatcgcatctcagcaagaatacggtgggtcaggagcc
tttctcaatggcggtggtcatggaggtagtcctccggggatgcacggttcatctcagaac
ccccagcaacatctgggcattgggtcagatcctcatccgtttagctatccagggatcctc
aacaacatgagtgaggttcagaaggttcttcagattgtggataacacagtttgccggcag
aagatggacggcaaccctgaagagatctctaagctcagagcatacatgaaggaattaggc
tcccagatggaagagcagaatcggatactggcctcccagcaaggattccttggcgttggt
cacaacagtcccaccaagaccatcattgactacacactggaaaaggtcaatgaagccaaa
gcgtgtcttcagagtttaacagaagattctaagagacgacctgtagatatcaaaaaagaa
agacctagtcacgctatggatcttctatctgaagataaagcacaggagagagatgcgcag
tatgcaccattctcttgtcagtattgcaaggagacgttttctggccctattccattacat
cagcatgagcgatatctctgcaagatgaatgaggagatcaaggctgtcctcaaacctaat
gatactgtaccaactggtcggagggggcttttcggctcagagcagcaggctggtgtgatc
ccctcatcccttgagaggaatgccaccagcccagtcaacctctacaaggatcacatgtcc
gtactaaaagcctactttgccatgaacactgagcctaactcagaggaattgaggaagatc
tccatggcagtgggtcttcctcaggaatttgtgaaggattcgtttgtgcaatggaaagct
caatctcaccatagcttctctaggaaaagatctcctcctcctgagcgaagtggagagatc
aatcatggcttgagcagggagtcagcatttgcccggtcacctgtttcactaagccaatac
ggcgactcgacggcagagatccaagccctcaccaatggggattcggggcacaagttgtcc
aaactgcatcagtttacaggcataaggcagaccaatgaaaagccgcttgactctgtggac
cacttgagaggtgagacaccctcacctttgaatctctcatcatcttcatccaaacactca
catagcagttcgtacacccctaacagcctcgcctctgaggatgcccatggggaaccactg
gacttgtctttgccaaaacatgtttccaaggccgaacggaggccaaaaccgaatggtttt
tccgttgaccacactatcaactcctctgcacgtgaaccaggaacagagcctttaaatttg
gcccacatcaagaaggagttcaatgggcccagcagtctgggtaatgaaaatcagctggag
aaaagctcaagccccatctttagcataaacccttttggcggcgggcacatgtacacctcg
cttccacctcatggagcattccctcctcctactttcatgtctacggctcaagccagcatc
ccgggactcaggccttactcagggttggatcccatgagtttccttccacctatggcttat
acttacgcagcgggggcagccacttttgttgagatgcagcaacgccggaagtaccagcgg
aaaccaggcttccagggggagctactggacagcgcaggggactatctgtcagggctagag
gacctgacagacagcgagtcgctgctcgcccggaagaagattaagaagactgaaagtggt
atgtacgcgtgtgacttgtgcgacaaaacattccagaagaccagttccctcctaagacac
aaatatgagcacacaggaaagcggcctcaccagtgccagatttgcaagaaggccttcaaa
cacaagcaccacctcatcgagcactcacgcctacattcaggcgagaaaccttaccagtgc
gacaaatgtggcaagcgcttctcccactctggctcttactcgcagcacatgaaccaccga
tattcctactgcaaacgggaggcggaggagcgcgaggccgctaagcaagatagccacgac
aacggcggacccctggagcccacggagctcctcatgcgtcgggcttaccttcaaggcctt
gggcccctgggcttttcggatccagaggaccagaccgaggacatcacacgagaaaacacc
atcttgagagatggtaccgagggcggggccagggaggcagaggaggcatatccggaagtg
actgacaggcaagagacaaggttggctgaagaagaggaaatggagacagaggggcagaga
tttgacattgggagccctgatgggacagcaaaagatgagaaagagagcgaagtaatggga
gggacagaggacgagagctcggaagagggtaaaccggcgagcaaaagaaatcctgacggc
gagaacgaggatgctgattaa
DBGET
integrated database retrieval system
