Garra rufa (doctor fish): 141340418
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Entry
141340418 CDS
T11039
Name
(RefSeq) TBC1 domain family member 8-like
KO
K19951
TBC1 domain family member 8/9
Organism
grf Garra rufa (doctor fish)
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
grf04131
]
141340418
Membrane trafficking [BR:
grf04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
141340418
Endosome - Golgi transport
Rab GTPases and associated proteins
141340418
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RabGAP-TBC
GRAM
RabGap-TBC_2
PH-GRAM_MTMR6-like
EF-hand_1
EF-hand_6
Motif
Other DBs
NCBI-GeneID:
141340418
NCBI-ProteinID:
XP_073701480
LinkDB
All DBs
Position
8:51426327..51462517
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AA seq
1094 aa
AA seq
DB search
MWITPEEVVLLKNALKLWVTDRSNDYFLLQHRRGHGDTGGKITGLLVGALDTVLDSNARV
APFRIVLHVPGSQVSWIIASGATIEEVQKHWKWLEQNLLPYMAVFENKEDAASFVQGKVK
GLIAEEVLGSQAAREDDPARFREDLARFEQRFGLPQREKLVTHYSCCCWKGRVPRQGSLY
LTTNHIAFYSFLLGKEVKLLVPWAEVTRLERVSVGLLTDVIRVHTRRKQRDFSMFLNVDE
VMRVMCQLADIALRRLLDSGGLTLDQTLQESTNITKRVLEEQALRQYVLSLFGLPRAERL
QEVMSCSIWTPHARCHTPGTVYTTDGYLCFSSREEGQCTLIIPLAEILSVEKAESTSSLP
NPVIISVRCKRAFQLIELLHRDELVENVRDRLRALHWKQAMIREHDQRKKSTISAAPYYT
FCYDTVQSDEEDSSVIISDKALRHTDVMSTFHPSQSDTQNKTSNMEQVRERLWDDHFTEF
GRGVHMFRTDKICKLVALGIPESLRGELWLNFSDACSSLAAHPNYYADLLEKCRGETSIA
TEEIERDLHRSLPEHPAFQNETGISALRRVLTAYAYRNPTIGYCQSMNILASVMLLYTKE
EEAFWLLVTVCERMLPDYFNRRVIGAQVDQSVFEELIGERLPELSERVPDLSPLASASLT
WFLTLFVNVLPFRSALCVLDCFFYHGIRAIFQIALAVLDANAAELSTCSDDGHALMILTS
FLEQVRHEEESHVCPEDAEASPHLNITTLITDAYEKFGGVTVKHIEMLRSRHRVQVLQAH
EDTTKDNALRLVTPEVSLSQEDLSELYDLFKTEHFISLYWGDGVCSSSSASPPPPPRVAA
VSSSERYVVDRAQFKSLYELLTPWVCGTHTDTVAQRAFTLLDQDRDSLVTFSQFAQMLDV
LYCEELNEKIRLLYRLHIPPALSEDAEDSSPLKSPMLSSTRPLYVNLPNGERKSYEEQLQ
QMLQDLSRGKEKNEEKPLPHMNQREFIQFCKTLYSMFQGHPDEAELFQAIGMVTSLVLQI
GEARHRDRPPAEGESESESDDGWSASFEQILASLLTEQVLVNFLERPVHLSAKISAAKPR
QYQERAGLLMIQHS
NT seq
3285 nt
NT seq
+upstream
nt +downstream
nt
atgtggatcactcctgaagaagtcgtgctgctgaaaaacgcgctcaagctctgggtgacc
gacagatccaacgattatttcctcctgcagcaccgacgaggacatggagacaccgggggg
aaaatcacaggtttgctggtgggcgccttggacacggtgttggactcgaatgcgcgcgtg
gcaccgttccggatcgttctacatgttccggggtcacaggtcagctggatcatagccagc
ggagccacaatagaggaagtgcagaaacactggaaatggctggaacagaacctgctgccg
tacatggccgtgtttgagaataaagaagatgctgccagttttgtacagggcaaagtgaaa
ggtttaatcgcagaggaggttttgggcagccaggctgctcgggaggatgatccggcacgc
tttcgggaagatctggcgcggtttgagcagcgcttcggtcttcctcagcgagagaaactg
gtgacgcattactcctgctgctgctggaagggccgcgtgccgcgccagggctcactgtac
ctcaccaccaaccacatcgccttctactccttcttactgggcaaagaggtgaagctgtta
gttccatgggctgaagtgacgcggctggaacgcgtgtcggtgggtttgctgacggacgtg
atccgcgttcacaccagacggaaacagagggatttctccatgtttctgaacgtggacgag
gtgatgagggtcatgtgtcagctggctgatatcgccctccgcaggctgctggacagcggc
ggactcacactcgaccagacgctgcaggagtccaccaacatcaccaagagggtgttggag
gaacaggccctcaggcagtacgtgctctctctctttggcctgccgcgggccgagcgtctg
caggaagtgatgtcgtgctcgatttggacccctcacgcccgctgccacacgcctggcacg
gtctacaccacagacgggtatctgtgcttcagcagccgtgaggagggccagtgtactctc
atcatacccctcgcagagatcctgtccgttgagaaggctgagagcaccagttctctccct
aacccagtcatcatcagcgtccgctgtaagcgagcgttccagctcatcgagctgctccat
cgggacgagctggtggagaacgtcagggaccgactgcgcgctctgcactggaaacaggcc
atgatccgcgaacacgaccagcgcaagaaatccaccatctccgccgcaccatactacacc
ttctgttacgacaccgtccaatcagacgaagaggacagcagcgtcatcatctctgataaa
gctctgcggcacacagacgtcatgtccacatttcaccccagccaatcagacacacagaac
aagactagtaacatggagcaggttcgagagcgcttgtgggatgatcacttcacggagttt
ggtcgaggagttcacatgttccgcacggataagatctgtaaactggttgctctggggatc
cctgagtctctgcgtggagagctgtggctcaacttctccgatgcgtgttcctcgctggca
gctcatccgaactactacgcagatctgctggagaaatgcaggggggaaacaagcatcgct
acagaggagatcgagcgagatctgcaccgctcgctaccagagcatccggccttccagaat
gagacgggaatctctgccttacgccgcgtcctgaccgcatacgcctacagaaaccccacc
attggttactgtcagtccatgaacatcctggcatctgtgatgctcctgtacaccaaagag
gaggaagcattctggctgctggtcactgtgtgtgagcggatgcttcccgactacttcaac
cgcagggtcatcggagctcaggtggatcagtcggtgtttgaggagctgatcggcgagcgt
ctgccggagctgtccgagcgcgtgcctgacctctctccgctggcgtcggcgtcgctcacg
tggttcctgacgctgttcgtcaacgtcctgcccttccgcagcgcgctgtgtgtcctggac
tgcttcttctaccacggcatcagagccatcttccagatcgcgctggcggtgctggacgct
aacgccgcggagctgagcacatgcagcgacgacggacacgcgctcatgatactgaccagt
ttcctggagcaggtcagacatgaggaggagtctcacgtttgtcctgaagatgcagaagct
tctcctcatctgaacatcaccacgctcatcacagatgcgtatgagaaattcggcggtgtg
acggtgaagcacatagagatgctgcggtcccgtcatcgcgttcaggtgctgcaggcgcat
gaggacaccaccaaagacaacgctctgcggttggtcacacctgaggtgtctctgtcgcag
gaagacctgtcggagctctacgacctcttcaagacggagcacttcatcagtctgtactgg
ggtgatggtgtgtgctcttcctcctctgcatctcctcctcctcctcctcgtgtggcggcg
gtcagctccagtgagcgctatgttgtggacagggctcagttcaagagcctgtatgagctg
ctgacgccgtgggtctgtggaactcacacggacaccgtcgcccagcgcgccttcaccctg
ctggaccaggacagagacagtctggtcaccttctctcagttcgctcagatgttggacgtt
ctgtactgtgaggagctcaatgagaagatccggctgctgtatcgactgcacatcccacca
gctctgagtgaggacgcagaagactcgtctcctctgaagagtcccatgttgtccagcacc
agacctctctatgttaacctgcccaacggagagaggaagagttacgaagagcagctgcag
cagatgcttcaggacctgagcagaggaaaggagaagaacgaggagaaacctcttcctcac
atgaaccagcgtgagttcatccagttctgtaagacgctctacagcatgtttcagggccat
ccggacgaggccgaactcttccaggccatagggatggtcaccagcctcgtgctgcagatc
ggagaggcgcgtcaccgcgatcggccgccggcggagggcgagagcgagtccgagtctgac
gatggctggtcggcgagcttcgagcagattctggcctccttactgaccgaacaggtgctg
gtcaacttcctggagcggcccgtccacctgagcgccaaaatcagcgccgccaaaccgcgg
cagtatcaggagcgcgccggtctgctgatgatccagcacagctga
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