Garra rufa (doctor fish): 141340479
Help
Entry
141340479 CDS
T11039
Symbol
tbc1d4
Name
(RefSeq) TBC1 domain family member 4 isoform X1
KO
K17902
TBC1 domain family member 4
Organism
grf Garra rufa (doctor fish)
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
grf04131
]
141340479 (tbc1d4)
Membrane trafficking [BR:
grf04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
141340479 (tbc1d4)
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
141340479 (tbc1d4)
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Rab associated proteins
141340479 (tbc1d4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RabGAP-TBC
RabGap-TBC_2
DUF3350
PID
DUF4249
Motif
Other DBs
NCBI-GeneID:
141340479
NCBI-ProteinID:
XP_073701566
LinkDB
All DBs
Position
8:complement(39691805..39731370)
Genome browser
AA seq
1246 aa
AA seq
DB search
MEGQDGKGNNDSNQKADKRFALWYMGWSSLDRRTTLPMLPWLVAEIRRKSEKNESGPAQA
REVQLYLSPPLIRCVPANSSNPSVFIFEHKAQFISRFIHNSHDLSYFAYLIRSQPDNPES
EMACHVFKAYDPNQVPEVISSIRQVSKAALKEESKPKQESDESFYNSQKFEVLYCGKVTV
NHKKAPSTLIDDCIDKFRQHEIERKRLRLLNGQRSSTEAPVEFIMGDDPLSASLCEVDEP
EPNLTEEELSEVGNGNLELTSSCSTGSLRGAFPECILEDSGFGEQREIRTRCNSLAGGLQ
KRPREAGKGTTRRRHASAPNNVQPSDADKNRTMLFQVGRFEVNLISPDTKSVVLEKNFKD
ISSCSQGVKQTDHFGFICRDVVESGPAQYVCYVFQCASESLVDEVMLTLKQAFTTAAAMQ
SSKNQIKLCEACPMHDLHKLCERIEGLYPPRAKLAIQKYLSQLTDNEQVNIFERVQKMKP
VSDHEENELVILHLRQLCETKQKSHVHIGEVPQQNASGSTVTSDNSGAGRNKLDVLKNKA
RSSLTSSLENIFSRGANRMRMRLGSMGSFDRGDSPGDSPPGTPPSYIEDDPDAPQFRRRA
HTFSHPPIKKKISFTEVSSQACKAPLRRQQSLAPELLQNSNVGFSRVRSVSESESYISLS
SSFHTPTFLKTFYQGSLGSLASLSDSGSLKSGNGEGRKRSLSGCSTDSLTLVPPRRVSWR
QKIFLRVASPMNKPSASMQNVDHMDGRELLPLSPRALNQDQDPQISPLSPEQGFGGEKGR
CSPADYRALWKKAIHQQILLIRMEKENQRLEASRDELHIRKMKLDYQEVCQCLKEVQALW
DRKLSSPCRTKVQWDKEEIHSAVCQGVPKSRRGEVWLLLSQQYRLRHRLPQRQQPPETPY
QDLLKQLTAQQHAILVDLGRTFPTHQYFSTQLGAGQLSLYNLLKAYSLLDTEVGYCQGIS
FVAGLLLLHMSEEQAFDTLKFLMYDLGIRRQYRPDMISLQIQMYQLSRLLHDYHRNLYTH
LEEHEICPSLYAAPWFLTLFASQFPLGFVARIFDLLFVQGTEVIFKVALCLLSSHEGEIL
ECDGFESIVDFLKSTIPTLTHSQMEETITKATEMDISKQLHAYEVEYHVLQDELSDAPPP
TEDSDRLDKLEKANAQLKKQNMDLLEKLQAARLKIQTLESSVESFLSRESKMKHLIRSLE
QEKASYQKTIERMRSSLPSDAMADVELTQLKSSTNGKTKETACKKP
NT seq
3741 nt
NT seq
+upstream
nt +downstream
nt
atggagggacaggatggcaaagggaataatgacagtaatcaaaaggcagacaagaggttt
gcgctatggtacatgggctggtcttctctggacaggcggaccacgctgccgatgctaccc
tggctggtggcggagatccggaggaaaagtgagaagaacgagtccggtcccgcacaggcc
agagaagttcagctgtatctctcgccccctctgattcgctgcgtgcccgcaaacagcagc
aacccgtccgtgttcatattcgagcacaaagcacagtttatatccaggtttatccacaat
agccatgatttgtcttattttgcctaccttatcagaagtcaacccgataacccagagtct
gagatggcatgccatgtgttcaaagcatatgatccaaaccaggtgcctgaggttattagc
agcattagacaggtgtccaaggctgctcttaaggaggaaagcaagcccaaacaagagagt
gatgagtctttttacaactcccagaaattcgaagtgctttactgtggaaaagtgacagtc
aaccacaagaaagccccttcaactctgatcgacgactgcattgacaaattccgccaacac
gagattgaacgcaagcgtctgcggctcctcaatggtcagcgcagctccaccgaggccccc
gtggagtttattatgggtgacgaccctctaagcgcttccctctgcgaagttgacgaaccc
gagcccaacttgactgaggaagagctgtctgaggtgggcaatggaaatctggaactgact
agctcctgcagtacaggcagtctacgaggggcctttcctgaatgtatcttggaggactca
ggttttggagagcagcgggagattcgtacacgctgtaatagcttggcgggcggcctgcag
aaaaggcccagagaggcgggcaaggggacgacacgtaggagacatgctagcgcacccaat
aacgtgcagccttcggatgccgacaagaatcggacaatgctgttccaggttggacggttt
gaagtgaaccttatcagccctgacaccaaatctgtggttctggagaagaattttaaggac
atctcctcctgttcacagggggttaaacagacagatcactttggctttatttgtcgggat
gtggtggagtctggcccagcccagtatgtgtgttacgtattccagtgtgctagtgagtca
ctggttgatgaagtaatgctcaccctgaaacaagcctttaccacagcagcagctatgcag
agctccaagaatcaaatcaaactgtgcgaggcatgtccaatgcatgacttgcacaagctc
tgtgaaagaatagaaggcttgtatcctcccagggcgaaactagccattcagaagtacctg
tcccaactgactgacaacgagcaggtcaatatatttgaacgggtgcagaaaatgaagcca
gtatccgatcatgaagaaaatgagcttgtgattcttcacctccgacagctgtgcgagacc
aagcagaagtctcatgttcatattggagaggtcccacagcagaatgcttctggcagcacc
gtgacctctgataactctggtgcgggccgcaataaactggatgtgttgaagaacaaagcc
cggagttctttgacaagctccctggaaaacatcttctcacggggggccaaccgtatgcga
atgcgtctcggcagcatgggaagttttgaccgcggcgactcccctggtgactccccacct
gggactccacccagttacattgaggacgatccagatgccccgcagttccgtcgccgagcg
cacaccttcagccacccgcccatcaagaagaaaatctccttcactgaggtttcctcacag
gcctgtaaagcgccactgcgccgacagcagtctttggccccagagctgctgcagaacagc
aacgttggtttctcgagagtgcgcagtgtgtctgagagcgagtcctacatcagtctctca
tcctccttccacacccccactttcctgaaaaccttttaccagggctcacttggctcactg
gcctccctgtcggacagcgggagtcttaagagtggaaatggagagggcaggaaaaggtct
ctgtctggctgtagcaccgattctttgaccttggtgcctccacgcagagtttcttggcgc
cagaagattttcctaagggtggcgtcacccatgaacaaaccctccgcttctatgcaaaac
gtggaccacatggatggccgggagctgctaccactttctcctcgggctttgaaccaggat
caggaccctcagatcagccctctgtccccagagcagggctttggtggagagaagggccgg
tgcagcccagctgactacagggctctgtggaagaaagccatccaccaacagattttactc
atccgcatggagaaagagaatcagcggctggaggccagccgtgatgaattgcacattcgt
aaaatgaagctggactaccaggaagtgtgtcagtgcttaaaagaggtgcaggccctttgg
gacaggaagttgagcagtccctgccgtactaaagtacagtgggacaaagaagagatccac
agtgctgtatgccaaggcgtccccaaaagtcggcgaggtgaagtatggctcctactctcc
cagcagtatcgtttgcgtcaccgtctgccgcagcgccagcaaccccctgaaacgccttat
caggatctcctcaaacagctcacagcacagcaacacgccatcctggtcgacctcggccgg
acattcccaacacaccagtatttcagcactcagctgggagctggacagctatctctgtac
aatctcctgaaggcctactccctgctggacacggaggtgggctactgccaggggatcagt
tttgtggccggattgctgctgttgcatatgagcgaggaacaggctttcgacactctcaag
ttcctcatgtacgacctgggcattcgccgacagtaccgtcctgacatgatctctctgcag
atccagatgtaccagctgtcccgactgttgcacgactatcaccgtaacctgtacactcac
ctggaggagcacgagatctgtcccagcctgtacgccgcgccctggtttctcactctcttc
gcctcccagttcccgcttggcttcgttgcccgtatatttgacctcctgtttgtccaaggc
acggaggtgatttttaaggtggccctgtgtttgctgagcagccacgagggagagatactg
gagtgtgacggctttgaaagtatcgtggacttccttaaatccaccatccccaccctcact
cacagccaaatggaagagacaatcactaaggccaccgagatggacatctccaagcagctg
catgcgtatgaagttgagtaccacgtcctgcaggatgagctgtcagacgctcctccacca
acagaggactccgataggctagataaactggagaaagccaatgcccagctcaagaaacag
aacatggacttactagagaaactacaggcggctcgtttgaagattcagacgttggaaagc
agcgtggagagcttcctgtcacgtgagagcaaaatgaagcacctgatccgttcgctagaa
caggagaaagcttcctaccagaagaccatcgagcgcatgcgtagcagtttaccatcagat
gccatggctgatgtggagctgacccaactcaaatccagcaccaatgggaaaaccaaagaa
actgcctgcaaaaagccttga
DBGET
integrated database retrieval system
