Garra rufa (doctor fish): 141340486
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Entry
141340486 CDS
T11039
Name
(RefSeq) GRIP and coiled-coil domain-containing protein 2
KO
K20282
GRIP and coiled-coil domain-containing protein 2
Organism
grf Garra rufa (doctor fish)
Pathway
grf05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
141340486
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
grf04131
]
141340486
Membrane trafficking [BR:
grf04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
141340486
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rab_bind
GRIP
GAS
DUF4407
Rho_Binding
Motif
Other DBs
NCBI-GeneID:
141340486
NCBI-ProteinID:
XP_073701579
LinkDB
All DBs
Position
8:complement(1984990..2012778)
Genome browser
AA seq
1517 aa
AA seq
DB search
MEDTNPESMASPAGQSSGKSKLDTLSKEDLIKFAKKQMVAMQKIKSKCTDLEKQVEELKH
PPSDTSDSSVIQELTERMDAVLLEKAESQQSLMLLRKEHEELKKQAQETVARLAALEEEL
DLKNKEYAEMHKHTSEHTANLKATCTEYETKISQTQEELAEAKRQWMAATEDLKDSHQMS
LTESQQEVENLQKEIEKLTKQYEDDLRYLEEQLEVNTADFERERERLLLLQDELSEQLAL
KEGFLQDVQEEEEDANRAGPPKQSPNAKTSDVPASDDSGDEGGVMQLALEDLQSQNMMLQ
EELVFLRNVKVELESELKQVREDFTVEKEEMEFRINELQMNKDASVDRGAERCSVSEEVQ
TLQESLNDDLKETCSSAEREETQRDRHSALSEETANTFEQTMSIITDRDVDLRDRAEHFI
KQYRAMKERTAASLQDMQEKLKSVFQERDRLLEQIRNAEETSDPAAEGLKMSFEDLRNKN
EEILVNIQHKETLVVEFKEMLKFIASRSEHEQISNLENQLSSMTEEKDERIKTLEEDFTA
LQTRQEECQDTIKLLQSQITSLSEERDALQRDMDANQEHLSAVQCQITEILKQNFSETEV
DGTSDISTLIDGLWTKAQEEKAVLSQQLDERVEHFTAELESVRRSGEERAAELQARINDL
LREKDLLKASLDDVVLDTEGLQKDLREIQAMNEKLRAENHSLLTQVADLSRSLEEKDKEA
PEEKEKESPDETDAPLDEAIELQQLLADKDTLISQLREEVGHLQMCKESSVSDENEQLKE
LTNEIELLKKESKDKDERMNKIKAVAVKAKKELDNSKKEVVSLREELDQLKDERDKLSRS
VKGIIHGAEDYKNLMVDYDKQTELLDQEREKLEQANKHNEDLTKRLQNAVQQHELLSSER
EDLAARIETLQNNVTQLEAQILEMQKLKCGLERDLEAERLLREQKSKDHQSAVREVEELQ
AQLSKHKHQLQQTAQELEQLRKDAQQNTLLDMEMADYEKLVKELNLKLCEKDKQTEEQES
QIRTQKEREQRLNEEIESLKLQVDQTEDKASRMKQLLVKTKKDLADAKQKEAAQMISQSA
LRGDLEAHQQQLEELKIQSSELTAERHRLQEQLKLMSEQHQRTSSSYQLSLSTLQDECTA
AKADLATTVTEFESYKVRVHNVLKQQKHKSSAQSDGDAFKQEREHLEAVVEQLRSRLQET
QQSLQSSTSELQQLQVEHDMLLERHNKILQETVSKEAELRERLLSLQSENVSLKSEHGQC
AAHLSAQTDALRSSFREQTRHLQDEHCSTVETLQKQISRLEAQLFQLQKEPISTGAVLVQ
QSRKSHMDRKPADVPQVDLQGMAREEGEGMETTETESLSSSGTTLPSLEQLLTTADLKHE
PAVWHMEPSKEELSQKLSTAARSVDHLSSLLHETEATNAVLMEQITLLKSELRRLERNQE
REKSVANLEYLKNVLLQFIFLRSGSERQALLPVIHTMLQLSPEEKSKLAAIAQGEEESAL
SRGSGWTSYLHSWSGIR
NT seq
4554 nt
NT seq
+upstream
nt +downstream
nt
atggaggacacaaaccccgagtcgatggcgtctccggcgggccagagctccggcaagtcc
aagctggacactctgtctaaagaagatctgataaagtttgccaagaaacagatggtggcc
atgcagaagatcaagtcaaaatgcacagatttagagaagcaggttgaagagctaaaacat
cctccgagcgacacgtcagactcctcagttatccaggaactgactgagcgaatggacgct
gtgctgctggagaaagctgagagtcaacagagccttatgttattgcgcaaagaacatgag
gagttgaagaagcaagcacaggagacagtggcaagattagcagctcttgaggaggagcta
gacttgaaaaataaggagtatgcagaaatgcataaacacacatctgagcatactgcgaac
ctcaaggcaacctgtactgaatatgagaccaaaatatctcaaactcaagaagagctggca
gaagccaagcggcagtggatggcagcgacggaggatctcaaagactctcaccagatgagc
ctcaccgaatcccaacaagaggttgagaacctccagaaggaaatcgaaaaactgaccaaa
cagtacgaagatgacttgcgatacttggaggagcagctggaggtgaatacggcagacttc
gagagggagcgagagcggctgcttctcctccaggacgagctttcggagcagctggcactg
aaggagggcttcctgcaggacgtccaggaggaagaagaggatgcaaatagagcagggcct
ccgaaacaatccccaaatgccaagacgtcagacgtcccggcatcggacgactctggtgac
gagggtggcgtgatgcaactggccctggaggatttgcagtctcaaaacatgatgcttcag
gaagagcttgtattcctgcgaaatgtgaaagtggagctggagtctgagctgaagcaggtg
cgagaggacttcaccgtggaaaaggaagaaatggagttcagaatcaacgagcttcagatg
aataaagacgcatctgtggacagaggtgcggagagatgcagcgtctctgaagaagtccaa
accttacaagagtccctcaacgacgacctgaaggaaacctgctctagtgctgaacgagaa
gaaacgcagagagacagacactcagctctttctgaagaaacagccaacacctttgagcag
actatgagcatcatcacagatcgggacgtggatctcagagaccgagcggagcactttata
aagcagtacagagccatgaaggagcgcacggctgcctcgctgcaggatatgcaggagaaa
ctcaagagcgtcttccaggagagggaccgtttgttagagcagattagaaatgcagaagaa
acatcagacccagcggcagagggactgaagatgtcttttgaggacctaaggaacaaaaat
gaagaaatcttagtgaatattcaacacaaggagactcttgtggtagagttcaaggagatg
ctgaagttcattgcatctcgatcagagcacgagcagatcagcaacctggagaatcaactg
tcctccatgactgaagaaaaggatgagcgcataaagacccttgaggaggacttcactgct
cttcaaaccagacaggaggagtgtcaagacaccatcaaactcctccagtctcagatcacc
agtctgtctgaagagagagacgcccttcagcgagacatggatgctaatcaggaacatctc
tctgctgttcagtgccagatcacggaaatcctcaagcagaatttctctgagactgaggtc
gatggcacgtctgatatctccaccctcatagacggcctctggactaaagctcaggaggag
aaagcagtcttaagccagcagctggatgagagagtcgagcacttcaccgctgagctggag
agcgtgaggcggtcgggtgaggagcgggcggctgagctgcaggcgcggatcaacgacctc
ctccgggagaaggacctcctgaaggccagtctggatgatgtggtgttagacactgaggga
ctgcagaaggacctgagagaaatacaagccatgaatgaaaagctgagggcagaaaaccac
agtctgctcactcaagttgctgacttgagcaggagtttagaggaaaaagacaaggaggcg
cctgaggaaaaggaaaaagagtcaccggatgaaaccgatgcaccgcttgacgaggccatt
gagctccagcagcttcttgcagacaaagacactctaatatcccagctcagagaagaagtc
ggtcatttacagatgtgcaaagagtcatcggtgtctgatgaaaatgaacaattgaaggag
ttaactaatgaaattgagttgctgaagaaagaaagcaaagataaggatgaacgcatgaac
aaaatcaaagctgttgctgtgaaggctaaaaaggaactggacaacagcaagaaagaggtt
gtctctctgagagaggaactggaccagctgaaggacgaaagagacaaattatcacgatct
gtgaagggcataatccatggcgcagaggactataagaacctgatggtggattatgacaag
cagactgagctgctggatcaggagcgagagaagctggaacaggccaataaacacaacgag
gatttaaccaaacgtcttcaaaatgcagttcagcagcacgagctgctgtcgtcagagcga
gaggatctcgcggcccgtatagagacgctgcagaataacgtcactcagctggaggcacag
atactggagatgcagaagctgaaatgtgggctggagcgagacctggaggcagaaaggctt
ttaagagagcagaagtctaaggaccatcagtctgcagtcagggaggtggaggagcttcag
gctcagctcagcaaacacaaacatcagctccagcaaaccgctcaggagctcgagcagcta
cgaaaggacgctcagcagaacacactgctggacatggagatggcggactacgagaagctg
gtgaaagagctcaatctcaaactctgtgagaaagacaagcagacggaggagcaggagtcg
cagatccggacgcagaaagaacgagagcagcgtctgaacgaggaaatcgagtctctgaag
ctgcaggtggatcagacagaagacaaagcctccaggatgaaacaactgctggtcaaaacc
aagaaagacctggcagacgcaaaacagaaagaagcggcgcagatgatctcccagtcggct
ctgagaggagatctggaggcccatcagcagcagctggaggagctgaagatccagagcagt
gagctgacggctgagcgtcaccggctgcaggagcagctgaagctgatgagcgagcagcac
cagcggacatccagctcttaccagctcagtctgagcacgctgcaggacgagtgcacagcc
gctaaggctgatcttgcgaccaccgtgactgagtttgagagttataaggtgcgagtccac
aatgtcctcaagcagcagaaacacaagagctcagcccagagcgacggcgatgctttcaaa
caggagagggagcacctggaggccgtggtggagcagctgcgcagccgtctgcaggagacg
cagcagagcctccagtccagcacatcagagctgcagcagctgcaggtggagcatgacatg
ctgctggagcgacacaacaagatcctgcaggagaccgtcagcaaagaggctgagctgcga
gagaggttgctgtcgctgcagtctgagaatgtgtctctgaagtctgaacacggccagtgc
gcggctcatctgagcgcccagaccgacgcgctgcgcagcagcttccgtgagcaaacgcgc
cacctgcaggacgagcactgcagcaccgtagagacgctgcagaagcagatcagcagactg
gaggcccagctcttccagctgcagaaagagcccatcagcacaggcgcagtgcttgtgcag
cagagcaggaagagtcatatggacaggaagcctgctgacgttcctcaggtggatctgcag
ggcatggctagagaggagggagaggggatggagaccaccgagacggagtcactgtcgtcc
agcgggaccacactgccctctctggagcagctcctcaccaccgcagacctcaaacacgag
cctgcagtctggcacatggagcccagtaaagaggagctgagtcagaagctgagcactgcc
gcccgcagcgttgatcacctgagcagtctgctgcacgagaccgaggccaccaatgctgtc
ctgatggagcagatcactcttctgaagagtgagctgcgtcgactcgagcgcaatcaggag
cgggagaaatccgtggccaacctggagtaccttaaaaacgtgctgctgcagttcatcttc
ctgcgctccggcagcgagcggcaggctttacttcctgtcattcacaccatgctgcaactg
agcccagaggagaagagcaagctggccgccatcgctcaaggtgaggaggagtcggcgctc
tcacggggatcaggctggacgtcgtatctgcacagctggtcaggcatcagatga
DBGET
integrated database retrieval system
