Garra rufa (doctor fish): 141340491
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Entry
141340491 CDS
T11039
Symbol
hnrnpa3
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein A3
KO
K12741
heterogeneous nuclear ribonucleoprotein A1/A3
Organism
grf Garra rufa (doctor fish)
Pathway
grf03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
141340491 (hnrnpa3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
grf03019
]
141340491 (hnrnpa3)
03041 Spliceosome [BR:
grf03041
]
141340491 (hnrnpa3)
Messenger RNA biogenesis [BR:
grf03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
141340491 (hnrnpa3)
mRNA cycle factors
Common to processing body (P body) and stress granule
141340491 (hnrnpa3)
Spliceosome [BR:
grf03041
]
Common components
Common spliceosomal components
hnRNP proteins
141340491 (hnrnpa3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_PARP14_3
Nup35_RRM_2
PHM7_cyt
RRM_3
Motif
Other DBs
NCBI-GeneID:
141340491
NCBI-ProteinID:
XP_073701583
LinkDB
All DBs
Position
8:complement(15393029..15406309)
Genome browser
AA seq
368 aa
AA seq
DB search
MCCRSFLRAACRPRGRKSCSMEGRDSKEPEQLRKLFIGGLSFETTEDSLRAHFEQWGKLT
DCVVMRDPANKRSRGFGFVTYSCVSEVDAAMAARPHKVDGRVVEPKRAVSREDSNRPGAH
LTVKKIFVGGIKEDTDEYHIREYFERYGKIETIDVMEERSTGKKRGFCFVTFDDHDTVDK
IVAQKYHTINSHNCEVRKALPKQEMQAVSNQRYRGGGGGGGNFMGRGGNFGGGNFGRGGF
GGGRGGYGGDGYNGFGGNYGGGPGYGGGRGGYGGGPGYGNQGGGGFGGHDNYNDGGNFGG
NFGGGGGGGGSGGGGNYNDFGNYAGQQSNYGPMKGNNFGGRNSGPYGGGYGSGGGSGGSG
GGYGSRRY
NT seq
1107 nt
NT seq
+upstream
nt +downstream
nt
atgtgctgcaggtcttttctccgtgcggcgtgcagaccgagggggcgcaaaagctgcagc
atggagggtcgtgacagtaaggagccggagcagctcaggaagctgtttatcggtggactc
agttttgagaccacagaggacagtttgcgagctcactttgagcaatggggcaaactcaca
gactgtgtggtaatgagagatccagctaacaaacgttcacgaggtttcggcttcgtgaca
tattcctgtgtgtcagaggttgatgctgctatggcagcgcggccgcacaaagtggacggt
cgtgtcgttgagcccaaacgggccgtttcccgagaggactctaatagacctggagcccat
ctgacagtgaaaaagatctttgtgggtggaatcaaggaagacacagatgagtatcatatc
agagagtattttgagcgctatgggaaaattgagactatcgatgtaatggaggagcgttca
accgggaaaaagagaggattctgcttcgtcaccttcgatgatcatgatactgtggacaaa
attgttgcacaaaaatatcacacaatcaactctcataactgtgaagtaagaaaagcactt
ccaaagcaggagatgcaagctgtttctaatcagaggtaccgtggtggaggtggaggcgga
ggcaatttcatgggccgaggaggaaactttggaggtggcaactttggccgaggagggttt
ggaggaggccgaggtggctacggaggagatggatacaacggatttggtggtaactatggt
gggggtcctggctatggaggcggtcgtggaggatacggtggaggtcctggatatggtaac
caaggtggaggaggctttggaggacatgacaactacaatgatggaggaaattttggaggt
aactttggtggcggtggtggtggcggaggcagtggaggaggaggaaattacaacgatttt
gggaattacgcaggacaacagtccaactacggccccatgaagggaaataactttggagga
aggaactcaggaccttacggaggtggatatggctctgggggtggcagcggcggcagtggc
ggaggctacggttccaggagatattaa
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