Garra rufa (doctor fish): 141340497
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Entry
141340497 CDS
T11039
Symbol
pou2f1b
Name
(RefSeq) POU domain, class 2, transcription factor 1b
KO
K09364
POU domain transcription factor, class 2
Organism
grf Garra rufa (doctor fish)
Pathway
grf05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
141340497 (pou2f1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
grf03000
]
141340497 (pou2f1b)
03021 Transcription machinery [BR:
grf03021
]
141340497 (pou2f1b)
Transcription factors [BR:
grf03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
141340497 (pou2f1b)
Transcription machinery [BR:
grf03021
]
Eukaryotic type
RNA polymerase III system
Other transcription-related factors
Octamer transcription factors
141340497 (pou2f1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
POU2F1_C
Pou
Homeodomain
Homeobox_KN
T6_Ig_like
Motif
Other DBs
NCBI-GeneID:
141340497
NCBI-ProteinID:
XP_073701591
LinkDB
All DBs
Position
8:complement(36596212..36624418)
Genome browser
AA seq
697 aa
AA seq
DB search
MADGGAASQDESSGPGAATADSRMSNPSETSKCAMESGDENTGAQTNGLDFQRQTVQTTS
AITNAHAQALLQQLTLTPAQQQLLLQQAQAQLLAAAVQHSAGQQSSTTGASISASAATPI
TQIPLSQPIQITPQLQQLQQQQNLNLQQFVLVQPGHPIATQLQPAQFIISQTPQGQQSLL
QAQNLLTQLPQSQANLLQTQPSITLATQPATPTRTIAATPIQSLPHSQTTPKHIDTPSLE
EPSDLEELEQFAKTFKQRRIKLGFTQGDVGLAMGKLYGNDFSQTTISRFEALNLSFKNMC
KLKPLLEKWLNDAENQTSDQALSSPSSLGSPGLGIEGLNRRRKKRTSIETNIRVALEKSF
LENQKPTSEEITMIADQLNMEKEVIRVWFCNRRQKEKRINPPSSGSAISTPIKAIFPPTA
TLVPSTASLVTSNTPTTMTVNPVLPLTSTSVSSIGFTGTTIGSATTNTASVISTAPVITT
AASSPSLSPSPTAAQTSSEQASAQETVTAVSQAPSSLASTLGTGQVMVAGPSLSAALQGA
AQLPTSASIAAMAAAAGLNPGLMASSQFTPGGALLSLAPGGFGSALSPALMSNSTLATIQ
ALASSGTLPITSLDGSGNFLFANTSAGSTPNLVTAPLFLNPQNLSLLASNPVSLVSAGGA
AGAAGALNLHITADAHQSAVTTANMPASTITTASKAQ
NT seq
2094 nt
NT seq
+upstream
nt +downstream
nt
atggcggacggaggagcagcgagtcaagatgagagttcaggaccaggtgcagcaactgct
gattctagaatgagtaatccatcggaaacaagtaaatgtgcaatggagagtggggacgaa
aacactggtgcccaaacaaatggactggactttcagaggcagactgtgcaaacaacaagc
gcaatcaccaacgcacacgcacaggccttgctccaacagttgactttgactccagcgcag
cagcagttattgctgcagcaggctcaggctcagctcttagcagcagcggtgcagcattca
gccggccagcagagcagcactacaggagccagcatctctgcctccgctgccacccccatc
acccagatccccctctcccaacccatccagatcacacctcagttacagcagctgcaacag
cagcagaacctcaacctgcagcagtttgtgctggtccagccaggtcaccccatcgcaaca
cagctgcagcccgcgcagttcatcatctcgcagacaccacagggccagcagagtctcctg
caggcccagaaccttctaactcaactacctcaaagccaagccaacctcctgcagacccag
ccaagcatcacacttgccacacagcctgctacacccacacgcacgatagcagcgaccccc
atccaatcccttcctcacagccagacgacaccaaagcacatcgacacacccagcctggag
gagcccagcgacctggaggagctcgagcaatttgccaagaccttcaaacagagacgtatc
aaactgggcttcacgcagggggatgttggccttgccatgggaaaactttatggaaatgac
ttcagccaaaccaccatttctcgctttgaggccttgaacctgagctttaaaaacatgtgc
aaactgaagcctctgcttgaaaaatggctcaatgatgcagagaaccaaacgtctgaccag
gccctgtccagtcccagctctcttggctcgcctgggctgggcatagaaggcctaaaccgc
cgccgcaagaagaggaccagcattgagaccaacatcagagtggccttagaaaagagcttt
ctggagaaccaaaaacctacctctgaggagatcaccatgatcgcggaccagctcaacatg
gagaaagaggtgatccgagtatggttctgtaaccgcagacagaaagagaagaggatcaac
ccacccagcagtggcagcgccatcagcactcctatcaaagcaatcttccctcccaccgca
actctggtgccgagtacagcaagtcttgtgaccagtaacacaccgactacgatgactgta
aacccagttttgcctctcaccagcactagtgtctccagcatcggtttcactggcacaact
attggctcggctaccactaacactgcatcagtcatctccactgcacctgtgatcaccact
gcagcgtcctctccttcgctcagcccttctcccaccgcagcgcagacgtcctcagagcag
gcttcagctcaggagacagtgacggcagtaagtcaggcaccttcctccttggcgtcaact
ttgggcactgggcaggtgatggtggcggggcccagcctctcggccgctctgcaaggagcc
gcccagctgcccacgagtgccagcatcgccgccatggctgcagccgcaggcctcaatcct
gggctcatggcgtcctcgcagttcactcctggcggggctcttctaagtttggcacccggt
ggtttcggaagcgctttgagtccagcactgatgagcaacagcaccttggccacaatccaa
gctttggcatctagtggcaccctgcccattacatctctggacgggagcgggaactttctg
tttgcaaacaccagcgctggcagcacccctaacctcgtgacggcaccgctctttctgaac
cctcagaacttgtcgctgctcgccagtaacccggtcagcctggtgtctgcgggaggggcc
gctggtgccgccggagccctcaacctgcacatcaccgccgatgcccaccagagcgctgtt
accacagcaaacatgcccgcctccaccatcaccacagcctctaaggcccagtga
DBGET
integrated database retrieval system
