Garra rufa (doctor fish): 141340531
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Entry
141340531 CDS
T11039
Symbol
sh3bp4
Name
(RefSeq) SH3 domain-binding protein 4
KO
K20066
SH3 domain-binding protein 4
Organism
grf Garra rufa (doctor fish)
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
grf04131
]
141340531 (sh3bp4)
Membrane trafficking [BR:
grf04131
]
Endocytosis
Clathrin-mediated endocytosis
Others
141340531 (sh3bp4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPA_SH3BP4
SH3BP4_C
DEATH_SH3BP4
SH3_2
SH3_1
SH3_9
ZU5
TcpQ
Motif
Other DBs
NCBI-GeneID:
141340531
NCBI-ProteinID:
XP_073701642
LinkDB
All DBs
Position
8:complement(23665127..23686273)
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AA seq
962 aa
AA seq
DB search
MAAHRIRSANNNTVLPRCKSEGALIDLSEGVSEATLTDVKVPSPSALRLDATGSFGAVRE
VIAIKDYCPSSFTTLKFSKGDCLFVIDTSGGEWWYAHNSKEMGYIPAAYVQPINYRDSTF
SDSGMIDSLSDISEGMKEMNISGEWTGSAKTTESRNDNPFVNKRMSTNPFLNGTLQGTPD
QNSKQNSANALCFDNLSPPISNTSSTININGFESGLFDTNSISPGSGIGSNFRRDNPFFR
SKRCYSMSELSVLQSLSDGNQGSLSFFGGMKSPKPEHYQSREDFKTAWLNHRKLTRSCHD
LDSIGQNPGWGQTQPIETNIVCNLDSSGGAVELPNTSISIHIPEGHVAPGETQQISLKAL
LDPPLELNNDRSTTVSPVVEVKLSNMETKTPVTLEMKVSVVVKIESRKTAEVVCVRSDCK
EGPYVPIPHVYMYGDTVQVTLDNLEPCMYVSVVAQAQTVAPYNTVWEHVVKKVTLGVYGP
KHIHPSFKTVVALFGHDCAPKTLLVSDVKKLSQSTLPVILQLWGKHQFVLTKPQDLQVGV
YSNMSNYEVKANEQAKTMRGFQIKLGKVARLIYMIAARDSTDISDFTLRIQVKDDRDCIL
GQFCVQTPTPPPKTSTRSSVQRRFLKKKEVSKIILSPLAVTTKYPVFQDRLVKNLKFAKF
LKTVIRQSKSLYLLEYLKGDIVALLSEEKIKLKGHLWTKEWYIGYYHGRIGLVHAKNILI
MGKVKPVNFKGHDLTTTILLEQILKPCMCLTYIYASVRTILMENVASWRVFADALGYVNL
PLAHFCRTEPESEPEKVASVLEKLKEDCNAAEGKERKSFQKELMKALLKMDCQGLVARLV
MDFVLLTTAVEVAGRWRELAERLAKVSRQQMEAYEAPHRDSRGQLDSEAMWKPAYDFLVT
WAAQIGDSYRDVIQELHTGLDKMKNPITKRWRHITGSLILVNCLDLLRSSAFSPCSQDDC
AI
NT seq
2889 nt
NT seq
+upstream
nt +downstream
nt
atggctgcccatcgcattcgatcagcgaacaacaacactgtgctccctcgctgcaaatct
gagggtgcacttatcgatctcagtgaaggagtgtcagaggccacccttacagatgttaaa
gtgccttcacctagtgccttacgactggatgctactggctcatttggagctgtcagggaa
gtgattgcaattaaggattactgtccgtccagctttaccacactcaagttctcaaaggga
gactgtctttttgttatagacacatcaggtggagagtggtggtatgcacataacagtaaa
gagatgggatatatcccagctgcttacgtccagccgatcaattatcgagattccacattc
agtgatagtggcatgattgacagcctaagtgacatttctgagggaatgaaagaaatgaat
atctcgggggagtggacagggtctgccaagaccacagaatctagaaacgacaatcctttt
gttaataaacggatgtcaacgaaccctttcttaaatggcacgctgcaaggcacccctgac
caaaacagcaagcagaattcagcaaatgctttgtgttttgataacctctcacctcccatc
tcaaacaccagcagcactattaatattaatggctttgagagtgggctatttgatacaaac
agtattagccctgggtcagggattggctcaaattttcgcagagacaatcccttttttagg
agcaagcgttgctacagcatgtcagaactgtctgtcctgcagtccttgtctgatgggaat
caaggttccttgagtttttttggtggcatgaagtcacctaaacctgagcattatcaaagt
agagaggacttcaaaacagcatggctaaatcaccgcaaacttacacgatcctgccacgac
ttggactccattggacaaaacccaggttgggggcaaacccagccaatcgagaccaacata
gtgtgcaatctggacagttctggtggtgccgtggagctgccaaataccagtatcagtatt
catattcctgagggtcacgttgcaccaggtgagactcaacagatatcgctgaaagccctt
ctggacccaccgttggagcttaacaatgatagaagtactactgtaagtccagtggtggaa
gtaaaactcagtaatatggaaaccaagaccccagtcactttagagatgaaggtctctgtt
gtagtgaagatagagagccgcaaaactgcagaggtggtgtgtgtgagaagcgactgcaag
gaaggtccatatgtcccgattccacatgtatacatgtatggagacacagttcaagtgact
ctagacaatttagagccttgcatgtatgtctctgtagttgcccaagcacaaactgtggca
ccgtataacacagtctgggaacatgttgtaaaaaaggttactcttggggtatacgggccc
aaacacatccacccgtccttcaagacagtggtggccctttttggccatgactgtgctcca
aagacgttactagtgagtgatgtaaaaaagctctctcagtcaactctacctgtcattctc
cagctctggggaaagcaccagtttgtactaacaaaacctcaagacctccaggttggtgtg
tattcgaacatgtcaaattatgaagtaaaagccaatgaacaggcaaaaaccatgagggga
tttcagatcaaacttggcaaggtggcccgcctcatctacatgatcgcagcacgtgattca
acagacatttcagacttcactttgcggattcaggtcaaggatgatagggactgtatcttg
ggccagttttgcgtccagaccccaaccccaccaccaaaaacaagcacaagaagctctgtt
caaagacgcttcctcaagaaaaaggaagtgagcaaaatcatactgtctcctcttgcggtg
accacaaagtaccctgtgtttcaggacagactagtcaaaaacctcaaatttgctaagttt
ctgaaaactgttataagacagtctaagagcctgtatttgctcgagtatcttaaaggcgac
atagtggcccttttgagtgaggaaaaaattaaacttaaaggacatctatggaccaaagag
tggtacatcggatactaccatggaagaattgggttggtgcatgcaaaaaacattttgatc
atgggaaaagtcaaacctgtcaatttcaaagggcatgatcttacgactacaatcctttta
gagcagatcctaaagccctgcatgtgcctgacgtatatctacgcatcagtgcggacaata
ctgatggaaaatgtggcaagttggagagtgtttgctgacgctttgggctacgtcaatctg
cctctggcacatttctgtcggacagagccagaaagtgaacctgaaaaagtggcttctgtt
cttgagaagctcaaagaagactgcaacgcagctgagggcaaggagaggaagtctttccag
aaggaactcatgaaggctcttctaaagatggactgtcagggcctggtggcacggctggtc
atggactttgtgctgttgactacagcggtggaagtggcgggtcgctggagggagcttgct
gagagactagctaaagtgtcccggcagcagatggaagcatatgaagctccacacagagac
agcaggggacaactggacagtgaggccatgtggaaacctgcctatgatttcctggttaca
tgggcagcccagattggggacagttacagggatgtgattcaggaacttcacactggattg
gacaaaatgaagaaccccattaccaagcgctggaggcacatcacaggctccctcatcctt
gtcaactgtctagatctcctacggagctctgctttcagcccctgctctcaagatgactgc
gccatataa
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