Garra rufa (doctor fish): 141340538
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Entry
141340538 CDS
T11039
Symbol
tra2b
Name
(RefSeq) transformer-2 protein homolog beta isoform X1
KO
K12897
transformer-2 protein
Organism
grf Garra rufa (doctor fish)
Pathway
grf03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
141340538 (tra2b)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
grf01009
]
141340538 (tra2b)
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
grf03041
]
141340538 (tra2b)
Protein phosphatases and associated proteins [BR:
grf01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
141340538 (tra2b)
Spliceosome [BR:
grf03041
]
Common components
Common spliceosomal components
SR proteins
141340538 (tra2b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
141340538
NCBI-ProteinID:
XP_073701649
LinkDB
All DBs
Position
8:complement(5045978..5054827)
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AA seq
280 aa
AA seq
DB search
MSDAEKEFVERESRSTSRSPSPRGSAKSASRSPERSPAQSKEGSHHTRSKSRSRSRSKTR
SRSHRSSRRHYSRSRSRSHSRRRRSRSRSYSSEYRRRHSHSHSPMSNRRRHVGDRANPDP
NSCLGVFGLSLYTTERDLREVFSKFGPLSDVSIVYDQQSRRSRGFAFVYFENREDSKEAK
ERANGMELDGRRIRVDYSITKRPHTPTPGIYMGRPTYGGGPSVSRRRDCYERGYERGYDR
YDDRDYYNSRSYRRRSPSPYYGRGPYRSRSRSRSYSPRHY
NT seq
843 nt
NT seq
+upstream
nt +downstream
nt
atgagcgacgccgagaaggaattcgtggagcgggagtcccgttccacctctaggagccca
agtcctagaggatctgctaagtcagccagtcgctcgccggagcgctcacctgctcagtcg
aaagaagggtcccaccacactcgctcgaagtcccgttctcgctccaggtccaagactagg
tctcgatcccatcggagttctcgccgccattacagtcgttcccgttcacgctctcattct
cgccggagacgttcccgcagccgctcgtacagcagcgaataccgccgccgccacagtcac
agtcattctcctatgtccaaccgcagacgtcatgttggagaccgggcaaacccagaccca
aatagctgcctgggagtgttcggcctgagcctgtacaccacagagagagacctgagggag
gtcttctccaagtttggccctctaagtgatgtcagcattgtgtatgaccagcagtctcga
cgctccaggggtttcgcctttgtctactttgagaacagagaagattcaaaagaggctaag
gagcgtgcgaatggtatggagctagacggccgcagaatcagagtcgactactcgattacc
aagaggccacatacacctactccaggaatatatatgggcagaccaacatatggtggaggc
ccaagtgtaagccgtcggcgtgattgctatgaacgaggctatgagcgtggatatgatcgc
tatgatgaccgtgactactataacagcaggtcatacaggagaagatctccctctccttac
tacggtcgaggaccatacaggtcaaggtcacgctctcgctcctactcccctcgtcattac
tga
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