KEGG   Garra rufa (doctor fish): 141340837
Entry
141340837         CDS       T11039                                 
Name
(RefSeq) protein mono-ADP-ribosyltransferase PARP4-like
  KO
K10798  protein mono-ADP-ribosyltransferase 3/4 [EC:2.4.2.-]
Organism
grf  Garra rufa (doctor fish)
Pathway
grf03410  Base excision repair
grf04210  Apoptosis
Brite
KEGG Orthology (KO) [BR:grf00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    141340837
 09140 Cellular Processes
  09143 Cell growth and death
   04210 Apoptosis
    141340837
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:grf03400]
    141340837
DNA repair and recombination proteins [BR:grf03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Other BER factors
     141340837
SSDB
Motif
Pfam: VIT PARP VWA_3 VIT_2 VWA VWA_2 VWA_CoxE DUF6473
Other DBs
NCBI-GeneID: 141340837
NCBI-ProteinID: XP_073702026
LinkDB
Position
8:complement(2721121..2745138)
AA seq 1657 aa
MGQLNSELKPSLKFKPPLKTASHVHLPLTIRTGWIKVSTQILGKETFKGHSELPKTEVEI
LEKGGPRPGRFRVYKEGDNDLPEFPSCFQVAKYSIFERVKPKTLSVLELQSAKGRGGQQY
RVLCSVLREAETAVVQDKLVFCVTSEDAVEAYLQLMKEMETEGFTKTDTLPPEVERLASY
SLQQLLLEEKLNCSTLSQKVGVFVELVWTEALGSLNNILTVPVSSISLNDVSRVEGLLLQ
AQKTEKEDEVKALLEEVNTLLPLRMIDPPSKHKLVSQKLDLCQLIRDIINVSEATLGSPS
PSSLGKYRALRCSIEVVPPQNHEFHVVSQLLQDRPVQIQQILRVSRGMELQLFMEDLGNI
KPLLHSTSPSSFVGILSRGLLLPRVGVEQHGIERTDIGNLGGGIYFSDSLKTSVKYSKPS
VTDGSRLLLVCEVALGRCKDLLKKDTTLTCAPDGYHSVHGVQRSPNRLSEFEDDEFVVYN
TEQIRLKYVVQYSLEGDEIKDFHPHINTELTQITDTTPDILSSDGSEDLESTKNPLEEMN
AGLLDSSGQKLPLQAVNVRCKLMDLLCQVIIFQTYTNQSAVPIEAKYVFPLEETAAVCGF
EAFINGKHVIGKVKEKEQARKEYKQAIEKGHGAYLMDQDAPDVFTISVGNLPPGATVLIK
VTFITELVVRSGSIVFSLSGSVAPWQQSDALNQTTQASVQKIGVIESKGEFSLFMSIEMP
YEIVNLSSSHRIKTKRTDCKAVISTLPGQTLGSEGLQVSFSLSNIHMPRMWVENHPDKDS
QACMLVFYPDFKSSGVSSSVGSSSVSDVVILLDSSKSMQGDTMLNARRIALHVLKSLDRS
LKINIISFSTDYKEAFPAPVPLDEGSEAARKFIMSCSGSGGGTDLWRPLRSLSLLPPCRG
VRNILLLSDGHVQNQPLSLQLVQENSCHTRLFTCGLSLTANRHMLRALAQAGGGTYEFFD
TKIKHTWTEKVRAQVQRMESPGCRSVAVKWQQFNPTAPPPVQAPSQLHALFSDCHTLVYG
FVPHCTQATLFGDLSGQEIKTMVSTTELQKTKGTFLHKLTARAIIRDYEDGILGSSEAEH
EGKKAELKSYIIELSKEFSILSQFTSFVAIEEREQNELDTGFTDIPKIISEENVDILPYI
GWTEEKLKAADIGAEDDEDDDDTEFERWSSSSPELMGSAYEKACLYGDDSEDDYGIIDFK
DQGFAAKGSSLSSSSSWRTSRFEGSTNAFRGSVKKGKKSPAIQRFDAPKAFRAKAPLPWE
TSSEALSPRSLSDVAFRGDMLPPPAATQVTASMSDFFDLSCHFKALESIPLENSLNSQTG
ITPVGASISASHPKLDYGLQHRYIVKSRQSSSSTLDEMLYKIDRKSKRRPAPPSPPLSSY
EPPRSDRQVFELLEVRDIGFDTAMSATEFATELHASAPPVCADTPMTPSPPPCPARYRRG
RPVARVAFDQAEMSAPPSPPRSGGFGGFFQHNISVPKAKRMGQRKQFLKKADKWISRPDT
VAWNELFELQHEDGYWECTDRLSSFLNLDVDFFANVFLKEKGICSLGLKAHAEILRLLAT
LLVLQLIRVKKLEVGQLLESLLRLKESQEPRPMYWEAVKRAVDWSCRTDRQYPCVCSRLE
IGWDWESSTRQLLGCDSPHPYSPLKPVLERRMGVSVM
NT seq 4974 nt   +upstreamnt  +downstreamnt
atggggcagttgaactcggagctcaagccaagcctcaagttcaaacctccactgaagaca
gcaagccatgttcatttaccattgaccatcaggaccggatggataaaagtgtcgacacag
atactaggaaaagagacgttcaaaggtcactctgaactcccaaagactgaggttgagatt
cttgagaagggtggaccccgtcctggcaggttcagagtttacaaagaaggagacaatgac
ctgcctgaatttccttcctgttttcaagtggccaagtattcaatttttgagagggtcaaa
cccaagactttgtctgttttggagctgcagagtgccaaaggacgaggaggccagcagtat
cgtgtgttgtgttcagtcttacgtgaagctgagactgcagtggttcaggacaagcttgtg
ttctgtgtgacgtctgaagatgctgtggaggcatatctgcagctgatgaaggagatggag
acagagggattcacaaagacagacacacttccacctgaggttgagcgcttggcatcctac
agcctgcagcagctgctgttggaggagaagctgaactgcagcacattatcacagaaagtt
ggtgtctttgtggagctggtttggactgaagctctcggttcgcttaataacatcctgaca
gtccctgtctccagcatcagcctcaatgatgtgagcagggtggagggattgttactgcag
gcacaaaagactgagaaagaggatgaagtcaaagccctgctggaggaggtcaacactctt
ctacccctcagaatgatcgaccctccttccaaacacaagcttgtgtcccagaaactagac
ctctgtcagctgatcagagatattataaatgtcagtgaggccactctgggaagcccgtcg
ccttcatctctgggaaagtatcgagctctgaggtgcagcattgaggttgttcctccacaa
aaccatgagtttcatgttgtctctcaactgcttcaggacaggcctgttcagattcagcag
atactgcgtgtcagcagagggatggagcttcagttgtttatggaggatttaggcaacatt
aaacccctcctccactccactagtcccagcagttttgttggaatactgtcacgaggtctg
ctgctgcccagggttggagtcgaacagcatggaattgagaggacggatatcgggaatctt
ggaggaggaatctacttcagtgactctctgaagactagtgtgaaatactccaagcccagt
gtaactgacggctctcggctgctgttggtgtgtgaagtggcgttgggtcggtgtaaggac
ctgctgaagaaagacaccactttgacttgtgcacctgacggctaccacagtgttcatgga
gtccaacgctctcccaacagactctctgaatttgaggatgatgagtttgtcgtctataac
acagagcagatcagactaaagtatgtggtgcagtacagtctggagggagatgaaataaaa
gactttcatcctcatattaacactgagctcacacagatcactgacacaacgcctgatatc
ttgtccagtgatggcagtgaggatttggagtccactaagaatcctctggaggagatgaac
gcaggtttgctggacagcagtggtcagaaacttcctctacaggctgtcaatgtgaggtgc
aagctgatggacctgctgtgtcaggtcatcatttttcagacctacacaaaccagagtgct
gttcccattgaagcaaagtatgtctttccactggaggagacggcagcagtgtgtggattt
gaagcctttatcaatggaaaacacgtcattggaaaggtaaaggaaaaagagcaggctcgt
aaggagtacaagcaagccatagagaaaggccatggagcctacctgatggaccaggatgca
cctgatgtatttactatcagtgtggggaatcttcctcctggagccacagttttgatcaag
gtgacgttcatcactgagctggtggtcagatcaggctctatagtcttctcactgtctggc
agcgtggcaccatggcaacagagtgacgcccttaatcagacaactcaggcatctgttcaa
aagattggtgtgatagagtcaaaaggggagttttctttgtttatgtccattgaaatgcct
tatgagattgtcaacttgagctcttcacaccgcatcaaaaccaagaggacagactgtaag
gcagtgatcagcacgttacctggacagactctgggatctgaagggttacaggtgtccttc
agtctttctaatatccacatgcccaggatgtgggtcgagaaccatccagataaagacagt
caggcctgcatgctggtgttttatccagactttaagtcaagtggggtgtccagctctgtg
ggttcgtccagtgtgagcgatgtggtcattcttctggactcctccaagtccatgcaggga
gacaccatgctgaacgcccgcaggattgcccttcatgtcctcaaatctctggaccgctca
ctgaagatcaacatcatctctttcagcactgattacaaggaagcttttcctgcaccagtg
cctttagatgagggatcagaagcagccagaaaatttattatgtcgtgtagtggctctggt
ggcggcactgatctgtggcggccccttcggagcctgagtctgctgcccccctgccggggc
gtgaggaacatcctgctgctctctgatggacatgttcagaaccagcctctgagcctacag
ctggtccaggaaaactcctgccacacgcgcctcttcacctgcggactcagcttgacagct
aatcgtcatatgctcagagctttggctcaggcaggtggaggaacatatgaattttttgac
acaaagatcaaacacacttggacagagaaggtgcgcgctcaggttcagcgtatggagtct
ccaggctgcagatcagtggcagtgaagtggcagcagtttaatcccacagcgccgcctcct
gttcaagccccctcacagcttcacgctctcttcagtgactgtcacactctcgtatacggc
tttgtgccacactgcactcaggccacactgtttggtgatttgagtggacaagagatcaaa
acaatggtttccaccacagaactacaaaagacaaagggaacttttcttcacaagttaaca
gcaagagcgatcatcagagactatgaagatggcattctaggcagcagtgaggcagaacac
gaggggaagaaagcagagctgaagtcctacatcattgagctcagtaaagagttctccatc
ttgtcccagttcacaagttttgtcgccattgaagagagggagcagaatgagcttgacact
ggattcacagatattcctaaaatcatatcagaggagaatgtggatattttgccatatata
ggctggactgaagagaagctaaaggctgcggatattggtgctgaagatgatgaagatgat
gatgatacggaatttgagcgatggagtagctcatctcctgaactcatgggttctgcttat
gaaaaagcctgtttatatggtgatgattcagaggatgactatggaattattgattttaaa
gaccaaggatttgcagctaagggttcttctcttagctccagtagctcctggcgtacttca
cgttttgaaggtagcactaatgctttcagaggctctgtgaaaaaagggaaaaagagtcca
gcgattcagcgattcgatgcaccaaaggctttcagagctaaagcccctcttccatgggaa
acatcatcggaagctctttctcctcgttccctttctgatgttgccttcagaggtgacatg
cttccccctccagctgccactcaggttaccgcctcaatgtctgatttctttgacctttct
tgtcactttaaggcattggaatctatccccttagaaaacagccttaattcgcagacaggc
ataactcctgtaggtgcctcaataagtgcttcccatcctaaacttgattatggtctccaa
caccgttatatagtaaaatctcgccagagttcatcttctactcttgatgaaatgttgtac
aaaattgacaggaagagcaaaaggcgtcctgctcccccttccccaccactttcctcctat
gagcctcctcgctctgatcgtcaagtttttgaattattggaagtcagagatattggcttt
gatactgcaatgtctgccacagagtttgccactgagcttcatgcctcagctcctcctgtc
tgtgcagatactcctatgactcccagccctcctccctgtcctgcgagatacaggaggggc
aggcctgttgcccgtgttgcctttgatcaagccgaaatgtctgcaccaccctctccccct
cgatctggtggctttggtggtttctttcaacataatatatcagttcctaaagcaaagcga
atgggacagcgaaaacaattcttaaaaaaagcggataaatggataagcagaccagacaca
gtggcctggaatgagctgtttgagcttcaacatgaggatggatactgggagtgcactgac
aggctgagcagcttcctcaacctggacgtagacttttttgccaatgtcttccttaaggag
aaaggcatctgttcccttggtttgaaggctcatgctgaaattctgaggcttttggcgact
ctgctggtgctgcagctgatccgggtgaagaagctggaagtgggacagctgctcgagtct
ctcctccgactgaaagagtcccaggagcccagaccgatgtactgggaggcagtgaagagg
gccgtggactggtcctgccggacagacagacagtatccgtgtgtgtgcagcaggctggag
atcggctgggattgggaatcatcaacacgtcaactactgggctgtgattctccacaccca
tattcacctctcaaacctgttctggagagacgaatgggtgtttcagtcatgtag

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