Garra rufa (doctor fish): 141340851
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Entry
141340851 CDS
T11039
Name
(RefSeq) phospholipase D1 isoform X1
KO
K01115
phospholipase D1/2 [EC:
3.1.4.4
]
Organism
grf Garra rufa (doctor fish)
Pathway
grf00564
Glycerophospholipid metabolism
grf00565
Ether lipid metabolism
grf01100
Metabolic pathways
grf04144
Endocytosis
grf04912
GnRH signaling pathway
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09100 Metabolism
09103 Lipid metabolism
00564 Glycerophospholipid metabolism
141340851
00565 Ether lipid metabolism
141340851
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
141340851
09150 Organismal Systems
09152 Endocrine system
04912 GnRH signaling pathway
141340851
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
grf04131
]
141340851
Enzymes [BR:
grf01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.4 phospholipase D
141340851
Membrane trafficking [BR:
grf04131
]
Exocytosis
Calcium ion-dependent exocytosis
Phospholipases
141340851
Endosome - Golgi transport
Others
Others
141340851
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PLDc
PLDc_2
PX
PH
Motif
Other DBs
NCBI-GeneID:
141340851
NCBI-ProteinID:
XP_073702041
LinkDB
All DBs
Position
8:complement(38754925..38816578)
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AA seq
1092 aa
AA seq
DB search
MSLRGRQGPPKLERLESVMSQFSGSSDQDDLQDDPEELDLSGHSDLCGEPRNISFQAIYN
FLPFKSLDGVIFLEEVPILVQVTEVERFTSTRVLNPNLYTIELSHGDFKWQIKRRFKHFQ
ALHQELLKFKALLKIPLPSRIHSVKRRSFKRRKLFHGEHIPTLPRRPDALVKEEQLISRK
LQLEDYLRNLLKRPLYRTHPATLEFLEVSQISFIQDLGPKGIEGLIFKKSGGNTFPVCYC
CGSNSVCYRWSKRWLVVKDSFVLYMRPEDGQVGTVILYDKGFHIKIGTLETGVRHGVTIE
NLCRALTIKCSTYRQARWWGHSIDEFSQMFGQDFLRENRHGSFTPVREKTTSKWFVNAAG
YFDAIADALEGAKEEIFITAWWLSPEIFLKRPVVDGNMWRLDHVLKRKAQQGVKIFVLLY
KEVEVVMGLNSEYTKKTLMGLHPNIRVIRHPDHMPSTALLWAHHEKSVVIDQSLAFLGGI
DLAYGRWDDSQHRLTDVGSVRRSPQHSPAPSPSLTHQSVTMVEESGEMKFHVVVEEIQAG
EGGAGGAGDSGSVEDPGEICANFTLPFVEEQGENSLTLPTGRLLRTPSEKSHHSSDGTES
KHYSRNSLNSRTPLTRECYSKSLSLHSSDSYSLGLHHSLPLPYETSSLRSYIGSTELCGE
ARFWHGKDYCNFILKDWVKLNKPFDDFIDRYKTPRMPWHDIGVLIHGKAARDIARHFIQR
WNFTKLVKKRSGATCYPCLMPKSLSAPMVPAEYSGKSTQANVQVLRSVCQWSIGTKVHEE
SIHLAYVSAIQNSKHFIYIENQFFISCADKSIHNSIGDALTERILRAYRDKKKFRVYVVM
PLLPGFEGDISSGGGQAIKAIMHFNYRTMCRGERSIIERLKCVMADCWIKYISFCSLRTH
ADLDGRLVTELIYVHSKLMIVDDCTVIIGSANINDRSMLGKRDSEMAVVVEDTEFQPSVM
DGESYQAGRFTLSLREECFRLVLGLLGDNIDINDPISDRFYKEIWMVTAAKNASVYDKVF
RCLPTDAVLNYKILRDYMSRPCMATEDPTQACAELKKIRGFLVQFPLYFLSEENLFPSFN
SKEGIMPIELWT
NT seq
3279 nt
NT seq
+upstream
nt +downstream
nt
atgtctctgaggggccgtcaggggcctcctaaactggagcgtctggagtcagtaatgagc
cagttctctggtagctcggaccaagacgacctacaagacgacccagaagagctggactta
agtggccattctgacctctgtggagaaccaaggaatatatcctttcaagcaatatacaac
tttcttcccttcaagtccctggatggtgttatatttcttgaagaagtgccaatattggta
caagtgacagaggtcgagcgattcacatctacaagggtgctgaatcccaacctgtatact
atagagttgagccatggagatttcaagtggcaaatcaagcgtcgttttaaacacttccag
gcacttcatcaggagctgctcaaattcaaggccctcttaaaaatccccctgccaagccga
attcactcagtcaaaaggaggtcattcaaacgccgtaaactgtttcatggagaacacatc
ccaacattaccacgaagacctgatgcccttgtcaaggaggagcagctcatcagcagaaaa
ctgcaacttgaggactatctgaggaatttattgaaaaggcctttatacaggacacatcct
gcaacgcttgaatttctggaagtgagtcaaatctcatttattcaggatctcggacccaaa
ggaattgaaggtctgatctttaagaaatcaggaggaaacacattccctgtctgttactgt
tgtggatccaacagcgtttgttaccggtggtctaaaagatggttggtggtaaaagactcc
tttgttctctacatgaggccagaggatggccaagtaggcaccgtgattctatacgataag
ggatttcacattaaaatagggaccctggagaccggagtcagacatggagtcacgattgag
aatctatgcagggcgcttactatcaagtgctccacatataggcaggctcgttggtgggga
cactccatagatgagttttctcaaatgtttgggcaggactttctgagggaaaaccgccat
gggtctttcacacctgttagagaaaagactacatcaaaatggtttgtcaacgcagctgga
tactttgatgccatagctgatgccctggaaggagcaaaggaggaaatcttcatcacagcc
tggtggttaagcccagaaatctttctcaaacgaccggttgtagacgggaacatgtggaga
ttagaccatgtcctcaagcggaaagcacaacaaggagtaaagatatttgtcctgctctac
aaagaagtcgaggtagtgatgggtctcaatagcgaatacacgaagaaaaccctgatggga
cttcaccctaacatcagggtcatccgacaccccgatcatatgccctccacagcattgctg
tgggctcaccacgagaagtcggtggtgattgaccagtcactcgccttcctgggagggatt
gacctggcctacggaagatgggacgattcccaacaccgactgactgatgtgggaagtgtg
agaagaagccctcagcacagtcctgctccatcccccagcctcactcatcagtcagttaca
atggtggaggagagcggggaaatgaaatttcatgtggtggttgaagaaattcaggctgga
gaaggaggagcagggggagcgggagattcaggctcagtggaggatccaggggagatctgt
gcgaacttcactttgcccttcgtggaggaacagggagaaaacagcctcactctgcccaca
ggaagactgctaagaaccccctcagagaaaagtcaccacagctctgatggaacagagtcc
aagcattacagtaggaatagtcttaattccaggacacctctcactcgggaatgttacagc
aaaagcttgtctctgcattccagtgattcgtactctctcggtctgcatcactctctcccc
ctgccttacgagactagttcactgagaagttacataggcagtactgaactctgtggagag
gctcgtttctggcacggcaaagactactgcaacttcatcctcaaagactgggtcaaactc
aacaagccttttgatgatttcattgacaggtataagacaccacggatgccctggcatgat
atcggggtgctgattcatgggaaggctgctagggatattgcacgacatttcattcagagg
tggaactttacaaagctggtgaagaagcggtcgggggcgacgtgctacccctgcctcatg
cccaagtctctctccgcacccatggtgccagctgagtacagcggcaaatcaacacaagct
aatgttcaggttttgaggtctgtgtgccagtggtctattgggacaaaggtccatgaggag
tccattcatttagcctacgtatcagccatccagaacagcaaacatttcatctacatagag
aaccagttcttcatcagttgtgctgacaaatccatccacaacagcattggagatgcgctg
acggagaggatcctgcgggcgtacagggataaaaaaaagtttcgggtctatgtggtgatg
cccctgctgcccggctttgaaggtgacatctcgtcagggggaggccaagccatcaaagca
atcatgcactttaattacaggacaatgtgccgaggggagcgctccattattgagaggctc
aaatgtgtgatggcagattgctggatcaagtacatctcattctgcagtctgcgcactcat
gctgacctggatgggcgtctggtcactgaactcatttacgtgcacagcaagctcatgatc
gtggacgactgcactgtcattattggctctgcaaacatcaatgacaggagcatgctgggg
aagagagacagtgaaatggctgtggttgttgaagacactgaattccagccctctgtcatg
gatggagagagttatcaggctggcaggttcactctgtctctacgagaggagtgcttcaga
cttgtacttggcttgctgggagacaatatagacatcaacgatcctatcagtgaccgattc
tacaaggaaatctggatggtgactgcagccaagaacgccagtgtgtatgacaaggtcttc
agatgtttgcccactgatgcagtcctaaactataagattctgagggactacatgtcacgt
ccttgcatggccaccgaagacccaacacaggcctgtgctgaactgaagaagatacgaggt
tttctggtccaatttcctttatactttctgtctgaagagaacctttttccttccttcaac
tctaaagagggaatcatgcctatcgagctttggacatag
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