Garra rufa (doctor fish): 141340911
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Entry
141340911 CDS
T11039
Symbol
aff3
Name
(RefSeq) uncharacterized protein aff3
KO
K15195
AF4/FMR2 family member 3
Organism
grf Garra rufa (doctor fish)
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
grf03021
]
141340911 (aff3)
Transcription machinery [BR:
grf03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
141340911 (aff3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AFF4_CHD
AF-4
AF4_int
Motif
Other DBs
NCBI-GeneID:
141340911
NCBI-ProteinID:
XP_073702127
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Position
8:complement(21942475..21967875)
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AA seq
1234 aa
AA seq
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MPTIHGSKGKLASVCFMLQHASQDMTQSWPYQQPPGEGGTQHFLYSHSKEGKQPNSRHRH
ARDGVSMRMPSRPLVAPHKSMLADDLKLSSDEDDKDEGSEQTTSWADNDRLSGQQQQHHT
HTHVGRVRHSSSGSSGSDPSSEWESSSQRSRSPSPGTHDRCRTPTQQRTLNCSTETESPP
STQWQLDRWLDKVPKNHQSGDHDPGGGQRRSAKSDCGRGPSPGRYWSRDSESRRDYSPCE
SPVPSPKFDYSPRNSPHPSPEYSPCPSPGISLVSSPVPSVCPSPGDSLHGSRSPSPLPLH
PPRSPSPSLSSSAVPSQGTYPQVQPPRQESPRHIVRPSVASNSANRPKVRPWVPPEQKKE
FRPKDSRSRDSRSKDSRSGPPQQPRHSEHSSTEKSHKDLTHKLETKNSESTSKQRFNSPS
NPISKHSSKQRPSPKPQARHSSTTDHSIEHNHRSNESTGVSIHSSHSKSGHSSHFNTLKS
SDRGPSSKSRDSSRSEVNSRSSHSSKTKSFPDTKHSSSKQTSQLSSSPKPKVKLGDTPVS
RTRHFQKDPKPREREREVDSRGKAQGATLVQTSKEQRQRRLAEEQVIRRRWVRSSEEEED
EEDRRTEEGERERKRRRRREQEVEWKAVQPKQRPHTNSQHHTQKEYNGHNLEEQRRKKRR
WSNEDISSGPLVTDTSPSLPLSPPSPTPVIKPTRPSSSSSSSSSSSSSSSSSSSDSDSES
SPPRNVAKVPADSTSNQKTVSKSRHDKQSSSTGAPPHGSNLSAPETAKQGRGRHKLYTLV
PFGRTEKSPTVAHRGLKKLVVRIDLSLLGRVPSTDEITERQSSSSALSSGKTKEKTSMKH
QHHLDQLPGDGRSKRKAENGDAQRENKRNHSRADKLPVPVHNDTEESLNKQNGCQDDYFY
SKRPVSPLSPPSGVLELSKPSVKAQHAEKYHTPPEKDKDSTPQKTQDQKMQPKVEVECVG
VSGHLQSLSGSLVPPSNLPLHYRGTVPISDVSHHAEYYMHEAKRLKHRADAMVDKLGKAV
NYVDAALSFMECGKAMEEGPLESKSPYTMYAETVELIRYAMRLKSHVGPGARQEDKQLAV
LCFRCLALLYWQMFRLKKDNALKYSKVLLDYFKSSPKGPHKPPPWNDAEKGTVPPASICS
VNIMGSHTGSSQSSVINIPHRIHQMAANHLNITNSVLYSYEYWEVADTLAKENKEFFNYL
NTLTGPLTLHSSMAHIVQYARQGLQWIRISANLS
NT seq
3705 nt
NT seq
+upstream
nt +downstream
nt
atgcctaccattcatggaagtaagggaaaacttgcaagtgtttgtttcatgcttcagcac
gcatcccaggacatgacccagtcctggccttaccagcagcccccaggggaagggggcacc
cagcatttcctgtactcacactcaaaggagggaaagcagcccaattcacgacacagacat
gcgagggatggtgtctctatgaggatgccctcacgtccactcgtagcccctcataaatcc
atgctcgctgatgacctgaagctcagcagtgatgaagatgacaaggacgagggaagtgag
caaacaacttcctgggccgataatgaccgcttgtcaggccagcagcagcagcaccacaca
cacacacatgtcggaagagtgagacattctagctcagggtcttcaggatcagacccctcc
agcgagtgggaaagcagcagccagcgatcacgcagcccgagcccagggacgcacgaccgg
tgcaggacaccgacccaacagcggaccctaaactgcagcacagagacggagagtccacca
tccacacagtggcagctggaccggtggcttgacaaagtccctaaaaatcatcagtcaggt
gaccacgacccaggtggaggacagcgacgcagtgcaaaatctgactgtggccgaggacca
tcacctggaagatactggagcagagactctgagtccagacgggattacagtccatgtgaa
agtccggtcccaagtccaaaatttgactacagccccagaaacagtcctcatcccagccca
gaatacagcccgtgccccagtccaggaattagccttgtgtcaagcccagttccaagtgtg
tgcccaagtccaggagacagcctccacgggagtcgaagtcccagccctttacctttacac
cctcccagaagccccagtccaagtctctcatccagcgcagtacctagccaaggtacatat
cctcaggtccaaccacctcgacaggaaagtcccaggcatattgtacggccatccgttgcc
tctaattcagcaaatcgtcccaaagtaaggccatgggtgcctccagagcagaaaaaggag
tttagacccaaggactctagatccagagactctcggtccaaagactccagatctggtcct
ccccaacaaccccgtcattccgagcacagctcaacagaaaagtctcacaaagatctcaca
cacaagcttgaaaccaaaaactctgaatccacaagcaagcaaaggtttaactccccttcg
aaccccatttcaaagcattcatcaaagcaaagaccaagcccaaaaccacaagccaggcac
tcgtctacaactgaccatagtattgaacataatcacagaagcaatgaatctacaggagtg
tccattcacagttcacactccaaatcaggccattcgtctcattttaatactctaaagagt
tccgaccgtggtccctcgtcaaagtccagggactcgtcacgaagtgaagtcaacagtcga
tctagtcacagctcgaagactaaatcttttccagatacaaagcattccagctctaaacag
acttcccagctgagttccagcccaaagcccaaagtcaaactaggagacaccccagtgtcc
agaaccaggcatttccaaaaagacccaaagcctagagagagagagcgagaggtggacagc
cgaggtaaggcccagggagcaaccctggtgcagaccagcaaggagcagagacaaagaaga
ctggcggaggagcaagtaataaggcgtcgctgggttcggagttctgaggaagaggaagac
gaggaagataggagaaccgaggaaggggaaagagagaggaaacggaggaggaggagggag
caggaagttgaatggaaggcagtgcagcccaagcaaagacctcacaccaacagccagcat
cacactcaaaaggaatacaatggacacaatcttgaggagcagaggaggaagaagagacgg
tggagcaatgaggacatttcctcaggtcctcttgtgacagacactagcccttctcttcca
ctttctccaccttcccctactcctgtcatcaagcccactcgtccatcatcttcctcgtcc
tcatcctcctcatcatcctcatcgtcctcgtcatcttcctccgactcagactctgagtcc
agtccaccacggaatgttgccaaagtccctgcagattcaacatcgaaccaaaaaactgtg
tccaaaagtaggcatgacaagcaaagttcaagcactggtgctcccccccacgggtcgaac
ttaagcgcccctgagacagccaaacagggtcggggtagacacaaactttacacgctggtg
cctttcggccgaacagaaaagtcccccacagttgcacatcgaggcctgaaaaaacttgtt
gtgaggatagacctttcgcttctgggtagagtccctagtacggatgagattaccgagaga
cagtcctcgtcttcagctttgtcatcggggaaaacaaaagaaaagacatcgatgaaacac
cagcaccacttggaccaactgcctggagatggcagaagtaaacgaaaagctgaaaatgga
gatgctcaaagagagaataagcgaaatcactctcgtgcagataaactaccggtgccagtc
cataatgacactgaggaaagccttaacaagcaaaatggatgtcaagatgattacttttat
tccaagaggccagtatctccattgtctcctccgtctggcgtactagagctctcaaagccc
tcagtaaaagctcagcatgcagagaagtaccacacacctccagaaaaagacaaagattca
acaccacagaaaacacaggaccagaagatgcagcccaaggtagaggtggagtgtgtcggg
gtgtcgggacatttacagtctctttctggatcgctggttcctccctcaaaccttcctctt
cactacagagggactgtacctatcagtgatgtctctcatcatgctgagtactacatgcat
gaggccaagaggttgaaacatcgagcagacgctatggtggataagttaggaaaagctgtg
aattatgtggatgctgctttgtccttcatggagtgtggtaaagccatggaagagggaccg
ctggagtccaagtccccctacaccatgtatgctgaaactgtggagctaataagatacgct
atgagacttaagagtcacgtcggccctggagctaggcaggaagacaaacagctagctgta
ctatgtttccgctgccttgctcttctttattggcaaatgtttagacttaaaaaggacaac
gctctaaaatactccaaagtcctgctggactacttcaagagttctccaaaaggacctcac
aaaccacctccttggaacgatgctgaaaagggaactgtacctcctgcctctatttgctct
gtcaatataatgggatctcacacaggcagctcacagagcagtgtcatcaacattccccat
cgtatccaccagatggcagcaaatcacctcaacatcaccaacagtgtcctgtacagctat
gagtactgggaggtggctgataccctggccaaagaaaataaggaatttttcaactatctg
aacacactgactggacccttgactctgcatagcagcatggcccatattgtccagtacgcc
aggcaaggcttgcagtggatccggatcagtgctaatctgtcataa
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