Garra rufa (doctor fish): 141340939
Help
Entry
141340939 CDS
T11039
Symbol
impg2a
Name
(RefSeq) interphotoreceptor matrix proteoglycan 2 isoform X1
KO
K19017
interphotoreceptor matrix proteoglycan 2
Organism
grf Garra rufa (doctor fish)
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
grf00536
]
141340939 (impg2a)
Glycosaminoglycan binding proteins [BR:
grf00536
]
Hyaluronan
Extracellular matrix or blood plasma proteins
141340939 (impg2a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SEA
DUF4214
EGF
Motif
Other DBs
NCBI-GeneID:
141340939
NCBI-ProteinID:
XP_073702159
LinkDB
All DBs
Position
8:40010619..40024831
Genome browser
AA seq
1063 aa
AA seq
DB search
MWKLIWTFILCCLGCIFAIGQLDITAGQVDQIPMLGNPYKCSQRLFQMFVEKPGDHGLLP
RHKRNVFLSSGVRLCSQETVQQAVNNQLNYYKLRVCQEIVWEAFKIFLDRLPNQEEYKSW
MNQCQTENVSIQEIGATFSQSEEHLALIHRRLAQTRVKSKTPTYSVCSPEESSQEQDHVT
SGDELPAETTVVPDEVISESVKEVTAEAPSAITTVEIDTEITNEIEKEVAVLPSRPLVEQ
RVELAMLLTGEPWSEELLNSTSSEHGKLTKKITEKISAALEKLTEFKSVSVLNIRPQMDP
SSGDKAVLVEYVVSLQTSSEEISSETLDFINLQSNMVEGTFSYSAGPTVQYTIIDLHSSV
TEAQHVESSPEEIHPAEESLDPDHKDDILEVEKPSELPGEVVKEVFTVGDLLDSTMSEEE
DLQDKDLVSQIQPNQTVTVEGEAGGPIIDSDFTLDDFNPASGSGAEGWVTVPTGAQEPVG
EEVFIDVDMPQIEDYEFSTITAMVEEDQILPEDTPELVTVKAGKDRNLQIGSDVPTVPPI
KLTEPESTLKPEEDHIQPAEEDDKEETVSTEKDEEIKVAVTTKEESEEVEEEEQEESVGS
TTIAQENDFVLTDVSAIQVSEDDLTEDEILLVSIEPASPVYPTPFSPEKEPPFFLITMMT
PAEVELVHTSNSEVMTTSLDVIHYTEEEGSGIPVVIQGDGISSIALPTNPGRSLIVFFSL
RVTNMIFSEDLFNKSSAEYKALEQQFLELLVPYLQSNLSHFENLEILNFRNGSIVVNSRM
KFGKPVPRGVITAVYLILEDFCNTAYQTMNLAIDKYSLDVESGEQADPCKFQACNEFAEC
TVNQWSGETECVCNAGYFSVDGLPCQSICDLQHDFCLNDGKCDIIPGQGAICRCRVGENW
WYRGEHCEEYVSEPLVVGIAIASVAGFLLVASGVIFFLARTLRDQYDKDEAEDPVGREDS
PPFLDRATKYNPMFESDLTTGYSHYYQRYPEPPVHSSASAEASTEFSSEEIKHIYENSEL
TKEDIQDRIRILELYTRDRQFADFLKQHQIAMDNQRESSSSSQ
NT seq
3192 nt
NT seq
+upstream
nt +downstream
nt
atgtggaagctcatatggaccttcatcctgtgttgtttaggctgtatttttgcaataggc
cagctggatattactgcagggcaagttgaccagattcctatgcttggaaatccatataag
tgctcacaaaggttgtttcaaatgtttgtggaaaagcctggagatcatggactcttgcca
agacataaacgcaatgtttttctgtctagtggagtacgcctctgcagtcaagaaacagtg
cagcaagccgtcaataaccaactcaattactacaagctcagagtgtgtcaggaaatcgtg
tgggaggcttttaaaatcttcttggatcgcctgcctaatcaggaagaatacaagagttgg
atgaaccagtgccagacggaaaatgtctccatacaggagattggtgctacctttagccag
tcagaagaacacttagcacttatccacagaagacttgcgcagacaagagtgaaaagtaag
acacctacatactcagtatgcagtcctgaggagtcttcccaagagcaagaccatgtgaca
tcaggtgatgagcttccagcagaaaccactgtggttccagatgaggttatctcagagagc
gtgaaggaagttactgcagaagcaccatctgctatcacgacagtggagatagatactgag
atcactaatgagattgagaaggaagtagctgttttgccttcacgtcctctggttgagcag
agggtggagctggctatgttattgactggagaaccatggagtgaagagctgttgaactcc
accagcagtgagcatggcaaactcactaagaagattacagagaagatttcagctgctttg
gagaaactgacagaattcaagagtgtgtcggtattgaacatcaggccacagatggatccc
tcaagtggtgataaggcagtattggtggaatatgttgtttccctccagaccagcagtgaa
gagatcagcagtgagacactggacttcattaatcttcagtccaacatggtagagggcacc
tttagttactcagcggggcccactgttcagtacaccattattgacctccattccagcgtc
actgaggctcagcatgtggaatcctctccagaggaaatccatcctgcagaagaatctcta
gaccctgaccacaaggatgatattttagaagtagaaaaaccatccgagctgcctggagag
gtggtgaaggaggtctttactgttggtgaccttttggattctacaatgtcagaagaggaa
gaccttcaagacaaggacttggtgtcacagattcaacccaaccagactgttactgtggaa
ggtgaagctggaggtcccattattgacagtgactttacacttgatgactttaatcccgcc
tctggatctggtgcagaaggctgggtaactgtccctactggggctcaagagccagttgga
gaagaggttttcattgatgtagatatgccacagatagaggactatgaattctccacaatt
acagcaatggttgaagaggaccagatcttgcctgaggacactcctgaactggttactgtt
aaagctggaaaagacagaaacctacagattggtagcgatgtgcccacagtgccgccaatt
aaattgactgagccagaatctaccttaaaacctgaggaagaccacatacaacctgcagag
gaagacgacaaggaagaaactgtttcaacagaaaaggatgaggaaattaaagttgctgtg
accacaaaggaggaatcagaggaggttgaagaagaggaacaggaagaatctgttggcagc
acaacaatagcacaggagaatgattttgtactaacggatgtttcagcaatacaggtttca
gaggacgacctaacagaggatgagatcctattggtctccattgaaccagcaagcccagtc
tacccaacacctttttcacctgagaaggaaccaccttttttcctcatcaccatgatgacc
ccagcggaggtggagttggtgcatacctcaaattcagaagtcatgactacatctctagat
gtgattcattacacagaagaagagggtagtggcatccctgttgtcatccagggcgatggc
atttccagcatagccttgccaactaaccctgggcggtctttgatagtgttcttcagtctt
cgtgtaactaacatgatcttctctgaggatctgttcaataagagctctgcagagtacaaa
gctttggagcaacagttccttgaactgctggtgccatatctgcagtcaaacctcagtcac
tttgagaacctagagattttgaacttcaggaatggaagtattgtggtgaacagtcgtatg
aaatttgggaagcctgttcctcgtggagtcattactgctgtttacctcattctagaggac
ttctgcaacacagcttaccaaaccatgaacctcgccattgacaaatattcgttagatgtt
gaatcaggggaacaggcagacccgtgcaagtttcaggcatgtaatgagtttgctgaatgt
acagtgaaccaatggtcaggtgaaaccgaatgtgtgtgtaatgcgggttactttagtgtg
gacgggctaccctgccagagcatctgtgaccttcaacatgacttctgcttgaatgatggg
aagtgtgatatcattccaggccaaggagccatttgcagatgccgtgttggggaaaactgg
tggtacagaggagaacattgtgaagaatatgtttctgagccactagtagttggtattgcc
attgcatctgttgccgggttccttctggtggcgtcaggagtaatcttcttcctagcaaga
acactgagagaccaatatgacaaggatgaggcagaagacccagtagggagagaggacagt
ccaccatttctagacagggccaccaagtataaccccatgttcgagagcgatttaactaca
ggctacagtcattactaccagcggtaccccgagcccccagtccacagcagcgccagtgcc
gaggcgtccacagagttcagcagcgaagagataaaacatatttatgagaacagtgaactc
accaaggaggatattcaagatcgcatccgcatccttgaactctacacaagagatcgtcag
tttgcagattttttgaagcagcatcaaatagcaatggataatcaaagagaaagttcctcc
agtagccaatag
DBGET
integrated database retrieval system
