Garra rufa (doctor fish): 141341021
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Entry
141341021 CDS
T11039
Symbol
tfdp1a
Name
(RefSeq) transcription factor Dp-1a
KO
K04683
transcription factor Dp-1
Organism
grf Garra rufa (doctor fish)
Pathway
grf03083
Polycomb repressive complex
grf04110
Cell cycle
grf04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
141341021 (tfdp1a)
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
141341021 (tfdp1a)
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
141341021 (tfdp1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
grf03000
]
141341021 (tfdp1a)
03036 Chromosome and associated proteins [BR:
grf03036
]
141341021 (tfdp1a)
Transcription factors [BR:
grf03000
]
Eukaryotic type
Helix-turn-helix
Fork head/winged helix cell cycle-controlling factors, DP
141341021 (tfdp1a)
Chromosome and associated proteins [BR:
grf03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.6)
141341021 (tfdp1a)
BRITE hierarchy
SSDB
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DP
WHD_E2F_TDP
Motif
Other DBs
NCBI-GeneID:
141341021
NCBI-ProteinID:
XP_073702250
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Position
8:complement(36095889..36110155)
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AA seq
408 aa
AA seq
DB search
MAKDAGLIEANGELKVFIDQNLSPGKGVLSLVTVHPQSVAVGKQLLPKTLGPSNVNIAPH
MVISTPQRPSGSNVILMNSPHTPSSQFITQSQPSEASPWSSGKRGKKGEKNGKGLRHFSM
KVCEKVQRKGVTTYNEVADELVAEFSSGDNHISPNDAHVYDQKNIRRRVYDALNVLMAMN
IISKEKKEIKWIGLPTNSAQECQNLEVERQRRLERIKQKQSQLQELILQQIAFKNLVQRN
RQREQQTKRPPPANSVIHLPFIIVNTSKKTVIDCSISNDKFEYLFNFDSMFEIHDDIEVL
KRMGMACGLEVGKCSAEDLKTARSLVPKALEPYVTEMAQGPISNVYMTGASSANGGRYHV
GSDGGADGTMASSSNDSHYSGSRVETPVSYMGEDDDDDDEFDENDDED
NT seq
1227 nt
NT seq
+upstream
nt +downstream
nt
atggccaaagatgctggtctgattgaggccaatggggagctgaaggttttcattgatcag
aacttgagccctggcaaaggtgtgctgtctttagtaacagtgcatccacagtcagttgcg
gttggaaaacagctgttgccaaaaacactgggcccttccaatgtgaacatcgcaccacac
atggtcattagcacacctcagaggcccagtggctccaatgtaatcctaatgaacagccca
cacacacccagctctcagtttatcacccagagtcaaccatcggaagcctctccgtggtcc
tcgggaaagaggggtaagaagggggagaagaacgggaagggcctcaggcatttctcaatg
aaagtttgcgaaaaggtccagcggaagggtgtcacaacgtacaacgaggttgccgatgag
cttgtggcggagttcagctctggtgataatcatatctcccctaatgatgcgcatgtatat
gaccagaagaacattcggcggcgtgtgtacgatgcactcaatgtgctgatggccatgaac
atcatctccaaagagaaaaaagagatcaaatggattggcctgcccacaaactctgctcag
gagtgccagaacctggaggtggagaggcaaagacgtttggagagaatcaaacaaaaacag
tcgcaacttcaagaactcatcttacagcaaattgccttcaagaaccttgtacagagaaac
cgccagagagaacaacagacgaaaaggcctccacctgccaactcggtcattcacttgcca
tttattatcgtaaacaccagcaagaaaacagtcattgactgcagtatctccaatgacaag
tttgagtacctcttcaacttcgatagcatgttcgagattcatgacgacattgaggtgtta
aagcgcatgggcatggcttgtggtctcgaggtgggcaagtgctctgctgaggacctgaag
actgccagaagtttggtgcccaaagcacttgagccctatgtcacagaaatggcacagggg
cctatcagtaatgtctacatgacaggggcctcgtctgctaatggaggccgctatcatgtt
gggagtgacggtggggcagacggcacaatggcctctagttcaaacgactctcactacagc
ggctctcgggtggagacccccgtctcttacatgggtgaggatgacgacgacgatgacgaa
tttgacgaaaacgacgacgaggactaa
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