Garra rufa (doctor fish): 141341090
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Entry
141341090 CDS
T11039
Name
(RefSeq) E3 ubiquitin-protein ligase CHIP-like
KO
K09561
STIP1 homology and U-box containing protein 1 [EC:
2.3.2.27
]
Organism
grf Garra rufa (doctor fish)
Pathway
grf04120
Ubiquitin mediated proteolysis
grf04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
141341090
04120 Ubiquitin mediated proteolysis
141341090
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
grf03110
]
141341090
04131 Membrane trafficking [BR:
grf04131
]
141341090
04121 Ubiquitin system [BR:
grf04121
]
141341090
Enzymes [BR:
grf01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
141341090
Chaperones and folding catalysts [BR:
grf03110
]
Other chaperones and cochaperones
Others
141341090
Membrane trafficking [BR:
grf04131
]
Autophagy
Aggrephagy
Other aggrephagy associated proteins
141341090
Ubiquitin system [BR:
grf04121
]
Ubiquitin ligases (E3)
U-box type E3
141341090
Multi subunit type E3
STUB1-CHIC2 complex
141341090
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
U-box
CHIP_TPR_N
TPR_1
TPR_2
ANAPC3
TPR_16
TPR_11
TPR_8
TPR_17
TPR_12
TPR_BSK1_C
TPR_19
TPR_14
TPR_9
ARM_TT21_C
TPR_7
TPR_CcmH_CycH
ARM_TT21_2nd
SRP_TPR_like
NAD_binding_6
ARM_TT21
Coatomer_E
TPR_10
SHNi-TPR
Motif
Other DBs
NCBI-GeneID:
141341090
NCBI-ProteinID:
XP_073702337
LinkDB
All DBs
Position
8:18701870..18703406
Genome browser
AA seq
284 aa
AA seq
DB search
MASSPEKSSSAQELKEQGNRLFLSRKYQEAATCYSKAINRNPSVAVYYTNRALCYVKLQQ
YDKALADCKHALELDSQSVKAHFFLGQCQLELENYEEAIGNLQRAYNLAKEQRLNFGDDI
PSALRIAKKKRWNSIEEKRISQENELHAYLTKLILAEKERELDDRVKQSEDSQNGGEISK
IKSKHDKYLMDMDELFSQVDEKRKKREIPDYLCGKISFELMREPCITPSGITYDRKDIEE
HLQRVGHFDPVTRSPLTQDQLIPNLAMKEVIDAFIQENGWVEDY
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
atggcgagcagccctgagaaaagctcctccgcgcaggagctcaaggagcagggcaaccgt
ctgttcctcagccgcaagtaccaggaggccgcaacctgctacagcaaagctattaaccgt
aacccgtcagtggccgtatactacactaacagagcactatgctacgtgaagctgcagcag
tacgacaaggcgctggccgactgtaaacacgccctcgagctcgacagccaatccgtgaag
gcccacttcttcctgggccagtgtcagctagaactggagaattatgaagaggccatcggc
aatctacagagagcttataacctggcaaaggaacagcggctgaattttggagacgatatc
ccaagtgctcttcgcattgccaagaagaaacgctggaacagcatagaagagaaacgaatc
agccaagaaaacgagctgcacgcctatctcaccaaactcatcctggccgagaaagagaga
gagctagacgacagagtcaagcaatcagaggacagtcagaacggaggcgagatcagcaag
atcaaatctaaacacgataaatatttgatggacatggatgagcttttctctcaagtagat
gaaaagaggaagaagcgagagatcccagattacctgtgtgggaagatcagttttgagctg
atgagagaaccctgcattactcctagcggcataacctacgatcgcaaggacatcgaggaa
catctacagcgtgttggccattttgacccagtcacccggagcccactgacccaagatcag
ctgatccccaatctggccatgaaggaagtgatcgacgctttcatccaggagaacggctgg
gtggaggactactaa
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