Garra rufa (doctor fish): 141341178
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Entry
141341178 CDS
T11039
Name
(RefSeq) interferon-induced GTP-binding protein Mx-like
KO
K14754
interferon-induced GTP-binding protein Mx
Organism
grf Garra rufa (doctor fish)
Pathway
grf03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
141341178
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dynamin_M
Dynamin_N
GED
MMR_HSR1
AAA_16
AAA_21
AAA_29
Dynein_AAA_lid
DUF5929
Motif
Other DBs
NCBI-GeneID:
141341178
NCBI-ProteinID:
XP_073702420
LinkDB
All DBs
Position
8:37819395..37824367
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AA seq
629 aa
AA seq
DB search
MSHCSSSKGKISGLNQHYEEKVRPCIDLVDSLRSLGVEKDLNLPAIAVIGDQSSGKSSVL
EALSGVALPRGTGIVTRCPLVLKLKSTKSDSWQGVLSYTKKKENITKKLKDSSEIENAVL
NAQIALAGKGEGISHEMITLEIESSDVPDLTLIDLPGIARVATGNQPIDIEKQIKSLIET
YIKRQETISLVVVPANIDIATTEALQMAFKVDSSGQRTLGILTKPDLVDKGMEETVVRTV
NNQVIPLNKGYMIVKCRGQQDINENLGLVKALEKERQFFNENSHYRSLLEDGKATIPLLA
ERLTKELVQHIMKTLPQLQKQLEMKLEKTSEDLKALGDGVPLDENEKTNFLIMKIRQFND
ALEEVKRAEEDLKNSDTRVFSKIRWEFGKWKLALDSKSVKTEEILRDEVEEYVRTRRGKE
LPGFVNYKTFENIVRQHVEELEEPALKMLRDVKDIVHTCVDRIVNSHFNAFSHLLRAAKN
PIEDFHDEQFQQAEEKIHSQFKMEKIVYSQDCLYSHQLNIVKQKPSTCFGLKASSVNADV
REMAYHLTSYLKITCDRLANQIPLIVQYHILDQYVSQLQNAMLSMIGGDNPGMLLREDSG
VASKRKELKERLERLKKGGKVLSKFVHSA
NT seq
1890 nt
NT seq
+upstream
nt +downstream
nt
atgtctcattgcagttcttccaagggaaagattagtggtctgaaccagcactatgaagaa
aaggtccgtccatgtattgacctagtggactctctcaggtcattaggtgttgaaaaagac
ctgaacctgccagctattgctgtcataggtgaccagagctcaggaaagagttctgtattg
gaagccctgtctggagtggccctgcctagaggaacaggtattgtgacacgatgtcctctg
gtactgaaactgaaaagtacaaagagcgatagttggcaaggagtgttgtcatatacaaag
aaaaaagaaaatattacaaaaaaactaaaagactcatcggaaatagaaaatgctgtctta
aatgctcagatagccttagctggaaagggtgaagggatcagtcatgagatgattactctg
gagatcgagtccagtgacgttcctgatctcactctcattgacctgcctggcattgctaga
gttgctactggaaaccagccaatagacatagaaaaacaaataaagagtctaattgaaaca
tacattaaaagacaagagaccataagcttggttgtggtgccagcaaacattgacatcgcc
accacggaggctctgcagatggccttcaaagttgattcatctggacaaagaactttgggt
attctgactaagccagacttagtggacaaaggcatggaggaaacagtggtcagaacggtc
aataatcaagtaataccactgaataaaggctacatgattgttaagtgccgaggccagcaa
gacatcaatgagaaccttggtctggtcaaagctctggaaaaagaaagacagttttttaat
gaaaattctcattacaggtcccttcttgaagatggaaaagctaccataccccttcttgca
gaaagactcacgaaagaattggttcaacacattatgaaaacgctgccacagctacagaaa
caacttgagatgaaattagagaagacgtctgaggatcttaaagcactaggagatggagtt
cctcttgatgaaaacgaaaagaccaattttctgatcatgaaaattcgccagttcaatgat
gctcttgaagaagttaagagggcagaagaggatctaaaaaactcagacacaagggtcttt
tccaaaatcagatgggaatttggaaaatggaaacttgccctggattccaaatcagttaag
acggaggaaatcctcagagatgaggtagaggagtatgttaggactcgtagaggaaaggag
cttcctggatttgtgaactataagaccttcgagaacattgtcaggcaacatgttgaggaa
ctggaggagccagctttaaagatgctcagagacgtcaaagacattgttcacacctgtgtg
gaccgtatagttaactctcattttaatgctttctctcacctgctgagggctgctaaaaat
ccaattgaagattttcacgatgagcaatttcagcaagctgaggagaaaatacattctcag
tttaagatggagaaaattgtctactcccaagactgtctctacagtcaccagctaaacatt
gtaaaacagaaaccctcaacatgttttgggttaaaggcatcatccgtcaatgcagatgtg
cgtgagatggcataccatctcacctcctatttaaagattacctgtgaccgtctggctaat
caaattccgctgatagtccagtaccacattctggaccagtacgtctctcagcttcagaat
gcaatgctttccatgattggaggggacaatccaggaatgctgctccgagaagattctggt
gtggcaagtaaaaggaaagaactgaaagagagactggaacgcctgaagaaaggaggcaaa
gtcctgtccaagtttgtgcattctgcataa
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