Garra rufa (doctor fish): 141341221
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Entry
141341221 CDS
T11039
Name
(RefSeq) E3 ubiquitin-protein ligase MARCHF4-like
KO
K10659
E3 ubiquitin-protein ligase MARCH4/9/11 [EC:
2.3.2.27
]
Organism
grf Garra rufa (doctor fish)
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
grf04121
]
141341221
Enzymes [BR:
grf01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
141341221
Ubiquitin system [BR:
grf04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
March proteins
141341221
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RINGv
zf-RING_2
Motif
Other DBs
NCBI-GeneID:
141341221
NCBI-ProteinID:
XP_073702470
LinkDB
All DBs
Position
8:complement(47728590..47760875)
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AA seq
383 aa
AA seq
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MLRGHGMLKSRCCVLFSDLKVFLLGPQAPTNPMSGQTARISPYASDNNNTLRAHRLRHWS
TPSTEDAVGPEAAADGSGWTGAAADEFPKDRRDDRFSFISYAEGTPVCRICFQGPEQGEL
LSPCRCSGSVRSTHQPCLIKWISERGSWTCELCYYKYQVIAISTKNPLQWQAISLTVIEK
VQIAAAILGSLFLIASISWLVWSSLSPSAKWQRQDLLFQICYGMYGFMDVVCIALIVHEG
PSVFRIFHRWQAVNQQWKVLNYDKKKDSEEVKNNEEWTRSLLHQREPTGADVSPSPSSLM
AAAGTPALDVTDDTTNTNTTAAAQDSYQTDALADGPALPDQHCPYNLLHLLSHLRPHEPR
SPPSNISATTTKPREVVMRVTTV
NT seq
1152 nt
NT seq
+upstream
nt +downstream
nt
atgctgcgcggtcacggcatgctgaagagccgctgttgcgttctcttcagtgacctcaag
gtgtttctgctcgggccacaggctcctacaaaccccatgagcggacaaacggccagaatc
agcccgtatgcctcggataacaacaataccttgcgagcccaccggctccggcactggagt
accccgtccacagaggacgctgtcgggccggaggcggctgcagacggatccgggtggacg
ggcgccgcggcggatgagttccccaaggaccggagggatgacagattctccttcatcagc
tatgcagaaggaaccccggtgtgcaggatatgcttccaggggccggaacagggtgagctg
ttgagcccgtgtcgctgcagcggctctgttcgcagcacccatcaaccgtgtctcatcaag
tggattagtgaaagaggctcatggacctgtgaactctgttactacaagtatcaggtgatc
gccatcagcaccaagaacccgctacagtggcaagcaatttcgctcaccgtcatagagaag
gtccagatagcggcggcgatcttgggttcgcttttcctcatcgccagtatttcgtggctt
gtgtggtcgtctctcagcccttcggccaagtggcaacggcaagacctgctattccagatc
tgttacgggatgtacggcttcatggacgtcgtctgtattgctctaatcgtccacgagggc
ccatcagttttccgtatatttcatcgctggcaggccgtcaatcagcagtggaaagttttg
aactatgacaagaaaaaagacagcgaggaggtgaagaataatgaggaatggacgcgttcg
ctgctccaccagagggagccgacaggagcggacgtctctccttcaccgtcttcactcatg
gctgctgctgggacgccggcgctcgacgtgaccgacgacacgacgaacacaaacaccaca
gcggccgcgcaggactcctaccagactgacgctctcgctgatggcccggctttaccggac
caacactgtccgtataacctcctgcatttactgagtcatctacggccgcatgagccacgc
agcccacccagcaacatcagcgcaaccaccactaaacctagagaagtggttatgagagtt
actactgtctga
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