Garra rufa (doctor fish): 141342171
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Entry
141342171 CDS
T11039
Symbol
sntb1
Name
(RefSeq) beta-1-syntrophin
KO
K24064
beta-syntrophin
Organism
grf Garra rufa (doctor fish)
Pathway
grf04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
141342171 (sntb1)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Syntrophin_4th
PH_17
PDZ
PH
PDZ_6
PDZ_2
PDZ_Tricorn
Motif
Other DBs
NCBI-GeneID:
141342171
NCBI-ProteinID:
XP_073702668
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Position
9:complement(32126715..32185372)
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AA seq
515 aa
AA seq
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MAVCGNRVQKSAYLKVLVRERWHAVQASLSDESLTLSCEEPATDTSLNLNGITTNGSYDQ
PDPTNSPKAGVRTPFTDSQVPEAIANRKRCVKVIKQEVGGLGISIKGGKENKMPILISKI
FKGLAADQTQALYVGDAILSVNGINLRDATHDEAVQVLKKAGREVMLEVKYMREATPYVK
KGSPVSEIGWETPPPESPRLGSPHFDIPSPPSLSLQGDRRYIPLKMCYITRSMTVPDPEN
RQIELHSSDAKHTIVMRHKDTASAQTWFTLMQTAITNLTSKVICELREHAGRHGIAGSRE
IRHLGWLAEKTESERQCWKPVLVMLTEKDLLLFDSMPRMREHWLSPTHTYPLLATRLVHS
GPDKGSPQPGGELCFATRTGTRLGIEAHLFRAETCKDLSLWTRHIVTGCHAAAEMIKEVT
TSCMYQGQDCRLVIHYERGFSVIADGEDSSVAQPLFSYPFEKLKMSADDGVRILYLDFGG
NEGEIQLDLHSCPKPIVFILHSFLSAKIARLGLVA
NT seq
1548 nt
NT seq
+upstream
nt +downstream
nt
atggcggtttgtggtaacagggtgcagaaaagtgcatatttgaaggtgctcgtacgggag
cgatggcacgccgtccaggcgagtttgagcgacgagtcgctgacgctcagctgcgaggag
cccgcgacagacaccagccttaacctgaacggcatcaccaccaacggctcctacgaccaa
ccggaccccacgaacagccctaaagccggagtaaggactccttttacggattcacaagtg
cccgaagcgattgcgaaccgcaaaagatgtgtcaaagtgatcaagcaggaggtcggtgga
ttagggataagcatcaaaggcgggaaggagaacaagatgcctattcttattagtaaaatt
ttcaaaggtctagctgcggaccagacccaagcgctctacgtgggggacgcgatactgtcc
gtgaacgggatcaacctacgggacgccacgcacgacgaggcggtgcaggtgctgaagaaa
gcgggcagagaagttatgttggaagtgaagtacatgcgggaagcgacgccatatgtgaaa
aaagggtcaccggtgtctgagatcggctgggagacgccgcctcctgagtcccctcgtctc
ggaagtcctcacttcgatatccccagcccaccctcactgtctttacagggtgaccgcaga
tacatccccctcaaaatgtgctacataacacgtagtatgaccgtccctgacccagaaaac
aggcagattgagctgcactcctcggatgccaagcacacaatagtcatgagacataaagac
acagcctctgcccagacgtggttcactctcatgcaaactgcaatcacaaacctcaccagc
aaagtcatctgtgaactccgagaacatgcgggccgccatggcatcgccggaagtcgagag
atccgacacctcgggtggctagcggaaaagacggaaagcgaaagacagtgctggaagccg
gttcttgtgatgttgacagagaaggacctgctgctgtttgacagtatgccacgcatgaga
gaacactggctcagcccgacacacacctaccctctgctcgccacacgactggtgcattct
ggtccagataagggttcgccacagcctggtggcgagttgtgctttgctacacggacggga
accagattgggtatcgaagcccaccttttcagggctgagacctgcaaggacctgtcgctc
tggaccagacacatagtcactggctgccacgcagctgctgagatgattaaagaagtcact
accagttgtatgtatcagggtcaggactgtcggttggtcattcactatgagcgaggtttc
tctgtcatagccgatggagaggacagctctgtggcacagcctctcttcagttacccgttt
gaaaagctgaagatgtctgctgacgacggagtacggatcctttatttggatttcggtgga
aacgagggtgaaattcagctggacttgcactcctgtcccaagcccattgtttttatcctc
cactccttcctatctgctaagattgcaagattaggattggtagcctga
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