Garra rufa (doctor fish): 141342316
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Entry
141342316 CDS
T11039
Symbol
l3mbtl1b
Name
(RefSeq) lethal(3)malignant brain tumor-like protein 4 isoform X1
KO
K24387
lethal(3)malignant brain tumor-like protein
Organism
grf Garra rufa (doctor fish)
Pathway
grf03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
141342316 (l3mbtl1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
grf03000
]
141342316 (l3mbtl1b)
03036 Chromosome and associated proteins [BR:
grf03036
]
141342316 (l3mbtl1b)
Transcription factors [BR:
grf03000
]
Eukaryotic type
Zinc finger
Cys2HisCys zinc factors
141342316 (l3mbtl1b)
Chromosome and associated proteins [BR:
grf03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.6)
141342316 (l3mbtl1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MBT
zf-C2HC
SAM_1
Chromo_MORC2_6th
SAM_2
MSL3_chromo-like
zf-FCS_1
Motif
Other DBs
NCBI-GeneID:
141342316
NCBI-ProteinID:
XP_073702845
LinkDB
All DBs
Position
9:24217958..24233055
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AA seq
790 aa
AA seq
DB search
MAETSTSDGPATGADFDMMSALDWKDGIATLPGSEIRFRMTEFGTLEIVTEVEPKVKEAE
PPGPRPQTTSTNNSHSSEQNKASNQTAKPQSNTEHPTSTVASTDPHRQAGASNTKSPSSV
ESPSVSTVPNAIVPVTEATANCRSCGHSGSRESFLQGKFCSAACVQPTSGRSTPAEAVEG
ERLGKRVRKKKKMFMESGDEEEDNIEEEEEKVKSSKGRRAAKVARLVTAPLVKKKNWSWS
AYLEEERAIAAPLKLFKEHQSFPQSRNGFKVGMKLEGLDPCHPALFCVLTVAEVQGYRIR
LHFDGYPECYDFWVNADSWDVKPPGWCEKTGLKLLLPKGCKDGEFNWNTYVKNCRGQLAP
KHLFKSLNTSVTPSGFRAGMKLEAIDRKNPSLICVATIAAAVDNRLLIHFDNWDDSYDYW
CDASSPYIHPVGYCEEAELTLTTPADYKPPKVFTWEKYLEETGSQAAPARAFKQRPPHGF
QVGMKVEAVDKRNAMLIRVSTISDVEDHRIKVHFDGWSDEYDYWLDADSPELHPVGWCQK
TGHPLQHPNGPRDSPVPPGQGCPTPGCNGVGHIRGPRYGTHYTAVSCPYSDLNLNKDGLV
PDRLGGERPVTLIGPPRHRRAETLTQTHPPTPSASTPDPPDTTTDACPQARPVREHVVTG
SAPKCVKPPQVKQEGDGKDSLQQFLHESVFCGWEPPRFHLCWEKHGKLLPEALGLTAKRV
AKWNTEEVATFVRGLPGCREHAATFRKEQIDGEAFLLLTQSDIVKILSIKLGPALKIYNS
ILMLKSADEE
NT seq
2373 nt
NT seq
+upstream
nt +downstream
nt
atggcagagacatctacaagtgatggtcctgccacaggagctgattttgacatgatgagc
gctcttgactggaaagacggcatagccaccttgccaggaagtgagattcggtttcggatg
actgaatttgggaccctggagattgtcacagaggtggagcccaaagttaaagaggcggag
cctccaggcccacggcctcaaactacaagcaccaacaacagtcattcttctgagcaaaac
aaagcatcaaatcagactgcaaagccccagtcaaatacagagcatccaacaagtactgtg
gcttccactgacccccacaggcaggcaggggccagcaacactaagagccccagctctgtg
gaaagccccagtgtgagtacagtacccaatgcgattgttcctgtgactgaggcgactgca
aactgcaggtcatgtggtcactctggttcacgcgaatcctttctacaaggcaaattttgc
agtgctgcttgcgtacagcccactagtggcaggtcaaccccagctgaggctgttgaagga
gagcgtttaggtaaacgtgtgagaaagaagaaaaagatgtttatggaatctggagatgaa
gaggaggacaacatagaggaggaagaggagaaggttaaatcctcaaagggaagacgagca
gctaaagttgctagactagtgacagcacctctggttaagaagaaaaactggagttggtca
gcttatctggaggaggagagggccattgctgctcccttgaaactttttaaggagcaccag
tcgtttcctcaaagcaggaatggatttaaagttggcatgaagttagagggattggacccc
tgtcaccctgctctcttttgtgttttgactgttgcagaggtgcaaggctacaggattcgg
cttcactttgatggttaccctgagtgctatgacttctgggtaaatgctgactcatgggat
gtgaagccaccaggctggtgtgagaaaacgggcctcaagctattgctgccaaaaggctgc
aaagatggagagtttaactggaacacatatgtaaagaactgtaggggtcaacttgccccc
aaacatctcttcaagagtcttaatacatcggtcacaccgtcaggattccgtgccgggatg
aagctggaagccattgacaggaagaacccatcactcatctgtgtcgcaaccatagctgct
gctgtcgacaaccgtctcctcattcactttgacaactgggatgattcatatgattattgg
tgtgatgccagcagtccatatattcatccagtcgggtactgtgaggaggctgagttaaca
ctcactacacctgcagattataagccaccgaaggtttttacttgggagaagtaccttgag
gaaactggatcccaggctgcaccagcaagagcctttaaacagagaccaccgcatggcttc
caagttgggatgaaagtggaggcagtggacaaacgtaatgccatgcttattcgtgtaagc
accatctctgatgtagaagaccacagaatcaaggtccattttgatggctggagtgatgag
tatgactattggctagatgctgatagccctgaactgcacccagtaggctggtgtcagaag
acaggtcatcctctacaacaccccaacggtcccagagattctccagtgcctccaggacaa
ggctgcccaaccccaggatgcaacggagttggacacattagaggacctcggtatgggaca
cattacacggcagtgagctgtccatactcagatctgaatttgaataaggatgggctggtg
ccggacagactaggcggggagaggccagtcacgcttatcggacccccgcgccaccgccgt
gctgaaacactcactcagacgcatcctcccacacccagcgccagcacccctgacccccct
gacaccaccacggacgcgtgtccacaagctcgcccagtgcgggagcacgttgtaactggc
agtgctcccaaatgtgtcaagccacctcaggtgaagcaggaaggtgatggaaaagattct
cttcaacagttcctgcatgagtctgtgttttgtggatgggagccaccgaggtttcatctg
tgttgggaaaagcatggcaaactcttgcctgaagctttaggcctcactgccaagagagtg
gccaagtggaacacagaagaggtggcaacttttgtaagagggctgcctggttgcagagag
catgctgccacctttaggaaggagcaaattgatggcgaggccttcctgcttcttactcag
tcagacattgttaagattctgagcatcaaactaggacctgcattaaaaatttataattcg
atcctcatgctgaagagcgcagatgaggagtag
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