Garra rufa (doctor fish): 141342334
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Entry
141342334 CDS
T11039
Symbol
psmc4
Name
(RefSeq) 26S proteasome regulatory subunit 6B
KO
K03063
26S proteasome regulatory subunit T3
Organism
grf Garra rufa (doctor fish)
Pathway
grf03050
Proteasome
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03050 Proteasome
141342334 (psmc4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
grf03051
]
141342334 (psmc4)
Proteasome [BR:
grf03051
]
Eukaryotic proteasome
Regulatory particles
PA700 (19S proteasome)
ATPase subunits
141342334 (psmc4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
Prot_ATP_ID_OB_C
AAA_lid_3
AAA_5
AAA_2
AAA_16
RuvB_N
AAA_22
nSTAND3
DUF815
NPHP3_N
AAA_28
RNA_helicase
Mg_chelatase
AAA_14
TIP49
NTPase_1
ATPase_2
NACHT
AAA_3
AAA_lid_PRS2_C
IstB_IS21
TsaE
AAA_7
AAA_33
Parvo_NS1
AAA_18
AAA_25
AAA_17
NB-ARC
AAA_24
ABC_tran
DUF3450
Motif
Other DBs
NCBI-GeneID:
141342334
NCBI-ProteinID:
XP_073702868
LinkDB
All DBs
Position
9:12391727..12397665
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AA seq
418 aa
AA seq
DB search
MEDGGVLVEKPQDDVPALLNSRPQTGLSFLAPEPEDLEDLYSRYKKLQQELEFLEVQEEY
IKDEQKNLKKEFLHAQEEVKRIQSIPLVIGQFLEAVDQNTAIVGSTTGSNYYVRILSTID
RELLKPNASVALHKHSNALVDVLPPEADSSIMMLTSDQKPDVMYADIGGMDIQKQEVREA
VELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQKYL
GEGPRMVRDVFRLAKENAPAIIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFD
QNVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFSTITSKMNLSEEVDL
EDYVARPDKISGADINSICQEAGMLAVRENRYIVLAKDFEKAYKTVIKKDEQEHEFYK
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
atggaggacggcggagtgttggttgagaaacctcaggatgatgtgccggccctgctgaat
tcaaggccccagaccggcttgtctttcttggctcctgaaccagaagacctggaggatctt
tacagcagatataagaagttgcagcaggagctggagtttctagaggtgcaggaggagtac
attaaagatgaacagaagaatctgaaaaaggagttccttcatgcccaagaggaggtgaag
aggatacagagcatccctctggttattgggcagttcctggaagcagttgaccagaatact
gccattgtgggctcaaccacaggctcaaactactatgttcggattctgagcacaattgac
agagagctgctgaagcccaatgcctccgttgctctgcacaagcacagcaatgctctggtg
gacgttctgcctccagaagctgacagcagcatcatgatgctcacttcagatcagaagcca
gatgtgatgtacgcagacatcggagggatggacatccagaaacaggaagtgagggaggct
gtggagctccccctcacacattttgagctctataaacagattggtattgatccacccaga
ggagtgctcatgtatggcccacctggttgtggaaagaccatgttggcaaaagctgtggct
caccataccacagcggcctttattcgtgtggtgggatctgagtttgtgcagaagtatctt
ggagagggtccacgaatggtgcgagatgtctttcgactggctaaagagaatgccccagcc
atcatcttcattgatgagattgatgcgattgctaccaagcgttttgatgcacagactgga
gctgatagagaagtgcagagaatcctgcttgagcttctcaatcaaatggatgggtttgac
cagaatgtgaacgtgaaggttatcatggccacaaacagggctgacacactggatccagcc
ttgctgcgcccaggtcgactggaccgtaagattgagttccctcttcctgaccggcgacag
aaacgcctggtgttctccaccatcaccagcaagatgaacctctcagaggaggttgacctg
gaggactatgttgctaggcctgacaagatctctggtgcagatatcaactctatttgccag
gaggctggtatgctggctgtgcgtgaaaaccgttacattgtgctggctaaggactttgag
aaggcttacaagacggttatcaagaaagacgagcaggaacacgagttctacaagtag
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