KEGG   Garra rufa (doctor fish): 141342422
Entry
141342422         CDS       T11039                                 
Symbol
xrcc1
Name
(RefSeq) DNA repair protein XRCC1
  KO
K10803  DNA-repair protein XRCC1
Organism
grf  Garra rufa (doctor fish)
Pathway
grf03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:grf00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    141342422 (xrcc1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:grf03400]
    141342422 (xrcc1)
DNA repair and recombination proteins [BR:grf03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Short Patch-BER factors
     141342422 (xrcc1)
SSDB
Motif
Pfam: XRCC1_N BRCT BRCT_2 PTCB-BRCT LIG3_BRCT F5_F8_type_C
Other DBs
NCBI-GeneID: 141342422
NCBI-ProteinID: XP_073702966
LinkDB
Position
9:complement(1310436..1342195)
AA seq 621 aa
MPEIKLKHVVSCSSEDNTHKADNLLSSDTYRKWKAARPGEKQVSVILQLEKEEQIHSIDI
GNEGSAFIEVLVGHSTSVKDQDFEVLLVTSSFMSPTESRNGTNTNRVRFFATSQLVKATA
QEKWDRVKIVCSQPYSRSIAYGVAFIKLHSPPDANDVPVSTPPKLTKLGQFRVKDESPSS
GSNIQPGSLFFGRDGAAKASTGIKVSPQNDKLSYAAAALKSEGSSTQTSSSSSQQAPVKR
KFEFSKERLEAAGPPPKKPSSSGSSEANSATPKPKARTGATASPVSSASPSQKTSDKRES
PKTKPEPKPKPKPKPKAKSTELVPFNRIMEGVVFVLSGFQNPFRGELRDKALAMGARYRP
DWTPDSTHLICAFANTPKYSQVKAAGGIIVRKEWVMDCHKTKLKMSSKRYLMDGAESSSE
SEEEQDESEEEAPKAKTPEKRQTTPIKQTIKKEEEEEDYGGSTDDEDPEDDASGMDTEDE
LNRVEMERKKKKKMVKESTVQVKVEDPYGGSTDENTDAEEEEDKPIPELPDFLKGKRFYL
YGKFPDNQKRQLQRYIIAFNGAVEDYMSEKVQFVVTSEGWDESFEDALMENGSLSFVKPT
WIFAINDRQKMLPYQPYTVVP
NT seq 1866 nt   +upstreamnt  +downstreamnt
atgcctgaaatcaaactcaagcatgttgtttcgtgcagcagtgaggacaatactcacaaa
gcggataacctcctgagctcagacacctacagaaaatggaaagctgccagacctggagag
aagcaagtttcagtcattcttcagctggaaaaggaagagcaaattcacagcatagacatt
ggaaatgaaggctctgctttcattgaggtccttgtcggacactcgacgtcagtcaaagac
caagactttgaggttctgctggtcacgtcgtccttcatgtcgcccacagagagccgtaac
ggcacaaacacaaaccgcgtacgtttctttgcgaccagccagctggtaaaggcgacggcg
caggagaaatgggatcgtgtgaagatcgtctgcagtcagccttacagcaggtccatagcg
tatggagtggccttcataaagctgcactctcctccggacgctaacgacgttcccgtctcg
actccaccgaaactcactaaactgggtcagttcagagtcaaagacgaatccccctcctct
ggctccaatatccagccgggaagcctgttttttggcagagatggcgctgctaaagccagc
acaggaatcaaggtgtctcctcagaatgacaagctgagttacgccgccgctgctctgaag
tctgaaggttcgtcgacacagacgtcatccagcagctcacaacaggctcctgtgaagagg
aagtttgagtttagtaaagagcgtctggaagccgccggtccaccgcccaaaaaacccagt
tcatctggttcttctgaagcaaactctgccacaccaaaacctaaagcaagaaccggagca
actgcaagtcctgtcagcagcgcttctccatcccagaagacgtcagacaagcgagagagt
cctaaaaccaagccggagcccaaaccaaagcctaaacccaaacctaaagccaagtctaca
gaactggtgcctttcaaccgcatcatggagggagtggtgtttgtcctgagcggcttccag
aaccccttccgcggagagctgcgggacaaagcgctggccatgggagcccgataccggccc
gactggacgccagactccacacacctcatctgtgctttcgccaacacacccaaatacagt
caggtgaaagcagccggaggcatcattgtcaggaaggagtgggtgatggactgccacaaa
acaaagctgaagatgtcctccaaacggtatctcatggacggagccgaatccagttcagag
agtgaagaagaacaggatgagagcgaggaggaagcgccaaaagcgaaaacaccagaaaag
aggcagacgaccccaataaagcagacgattaagaaagaagaggaggaggaagattatgga
ggttcaacagatgatgaagatccagaggacgacgcgtctggcatggacactgaagatgag
ctgaacagagttgagatggaacgcaagaagaagaagaaaatggtgaaagaaagtacagtt
caggtgaaagttgaagatccatacggcggctctactgacgaaaacacagatgctgaggaa
gaagaggataaacccattcccgaactgccagacttcctgaaaggaaagcgcttctatctc
tatggcaagttccctgacaaccagaaaaggcaacttcagcgctacatcatcgcattcaac
ggagctgtggaagactacatgagcgagaaggtccagtttgtcgtcaccagcgaaggatgg
gacgaatcgtttgaggatgccttgatggaaaatggcagtctgagctttgtgaaacctacc
tggattttcgccatcaatgacaggcagaagatgctaccgtaccagccctacactgtcgtc
ccttaa

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