Garra rufa (doctor fish): 141342464
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Entry
141342464 CDS
T11039
Name
(RefSeq) E3 ubiquitin-protein ligase NHLRC1-like
KO
K10602
E3 ubiquitin-protein ligase NHLRC1 [EC:
2.3.2.27
]
Organism
grf Garra rufa (doctor fish)
Pathway
grf04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
141342464
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
grf04121
]
141342464
Enzymes [BR:
grf01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
141342464
Ubiquitin system [BR:
grf04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
141342464
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NHL
zf-RING_5
zf-RING_UBOX
zf-RING_2
zf-C3HC4_3
zf-C3HC4
zf-C3HC4_2
zf-C3HC4_4
zf-RING_11
RING_XB3-XBAT31
Beta-prop_IFT122_1st
Motif
Other DBs
NCBI-GeneID:
141342464
NCBI-ProteinID:
XP_073703013
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All DBs
Position
9:complement(2172712..2174625)
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AA seq
394 aa
AA seq
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MSRTPVPPHTRAEDILTDIRSNLLECKVCFESFSLQKRDQAARNLPCGHVLCLKCICALS
RPVQQKLECPFCRKLCDIGSTSECRALADLQELLLCESHPKPSAGFHGWTENLGWGTLRL
HSAFGGWGTMVNPTGMALDETSGQIAVVHDAEKRVIVFDAQGTLLNTFGGTSDVCYPLDV
ALTKTGHVLVTDAGEQSLKVFTSKGRPLATVHGFRLPWGVDVDNRGRVLVTDAQMGTLNQ
VLMDFSSGVVLANTVVLKELTHPRSVASCRASGNIAIVERLQDSFMLRIFNSDFVPLTQV
DSFSLSLKSTLSLVISVVAFDRNGDVIVGDVQNGMVWSLGKVQKSFEMTPLVSGLIRPVA
LAAMAFNELVVLDGGDHVVKFYVTDAEDLYCDKK
NT seq
1185 nt
NT seq
+upstream
nt +downstream
nt
atgtccaggacgcccgtcccaccacatacgagagcagaagacatcctgacagacatccgc
tcaaacctgctagagtgcaaagtatgttttgaaagcttttccctgcagaagcgagaccaa
gcggctcgaaatcttccctgcggccacgtgctctgtctcaaatgcatctgtgccttgtcc
cgccccgtccagcagaaattggagtgtcctttttgtagaaaactctgtgacattggcagc
acctctgaatgccgtgctctggcggatctccaagagcttctactgtgtgaatcccatccc
aaaccgtccgctggttttcacggatggactgaaaacttgggttgggggacgttgcgtctc
cattcggcctttggaggatgggggacgatggtcaacccaactggaatggctttggacgaa
acatcaggacagattgcggtggtgcatgacgctgaaaaacgagtgattgtttttgatgcg
caaggaactcttttgaacacctttggagggacatccgacgtctgttatccgttagatgtt
gcgttgaccaaaactggacatgttttggtcaccgatgctggtgagcagtcactcaaagtc
tttacgtccaaaggccgtcctctggcgaccgtccacggttttcgacttccgtggggtgtt
gatgtggacaaccgtggacgtgttttagtgaccgacgctcagatgggaactctaaaccaa
gtcctaatggacttctcttctggtgtagttttagctaacacagtcgttttgaaagaactg
acccatccgcgttcggttgcttcttgcagagcttcgggaaacattgcaatcgtggagcga
ctccaagacagctttatgttgagaatcttcaatagtgacttcgttcctttgacgcaagtg
gacagctttagtttgagcttgaagagcactttgagtttggttatatctgtggttgctttt
gatagaaatggagacgtgattgttggggacgtccagaatggaatggtttggagtttggga
aaggtccagaagagctttgagatgactccactagtgagcggactgattcgtccggtggcg
ttggctgcgatggctttcaatgagcttgttgtcttggacggtggtgatcatgtggtcaaa
ttctacgttacggacgctgaagacttgtattgtgataaaaaatga
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