KEGG   Garra rufa (doctor fish): 141342482
Entry
141342482         CDS       T11039                                 
Name
(RefSeq) myomesin-3-like
  KO
K24495  myomesin
Organism
grf  Garra rufa (doctor fish)
Pathway
grf04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:grf00001]
 09140 Cellular Processes
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    141342482
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04990 Domain-containing proteins not elsewhere classified [BR:grf04990]
    141342482
Domain-containing proteins not elsewhere classified [BR:grf04990]
 Fibronectin (FN) domain-containing proteins
  Fibronectin type III domain-containing proteins
   141342482
SSDB
Motif
Pfam: I-set fn3 Ig_3 Ig_2 ig Ig_DSCAM-DSCAML_C V-set Pur_ac_phosph_N Tissue_fac C2-set_2 fn3_2 Herpes_gE_N TY-Chap3 Ntox30 CytoC_RC
Other DBs
NCBI-GeneID: 141342482
NCBI-ProteinID: XP_073703040
LinkDB
Position
9:3758624..3845399
AA seq 1432 aa
MIQTIKQLFLDQCLQDDHEGRIEIRKHTDELLLLLLCQSHMQSFHDEEASLSEFYPIIPG
DVMSVKEILTGPKFPRHRTWDVLRETLSNDELHERDQWTMFGNEAEKLEIGVIRNQRVVR
ERVDRFSLRREAERKSSLHMKYIEDLSMKAPDFPIPLRPHTVWAGMDVKLSCSVQGCPTP
SVTWYKDDVPLRGALPWNYKLTQKFGLNVLEIRRCSAEDAGEYKVIAKSSLGEATSSAKL
IVNSHEGAEAKLKRSWTPIPEPDAQLASTFPPTFVKEGDDLVLQCSFTSALLPFQQDVVW
YRDGQVLRQSSRVELQTGQRSASLTLKRVHKEHEGLYSVRLRTWDGSVEHSAYVYVKDGP
AVVVGAPGSPLQLECSDVNRDYVFLSWIPPSADGAAAVQGYFIERCDIGVGKWERCNDVV
QKECHFPVMGLKESTMYQFRVCAVNQAGMGRPSKPTDPVLTSDPMEPSRTMVVKVERGRE
IVITKDQLEGQIRVPSPPTDVRVCELSDTYAVLSWTEPDPRGREPLTYFVERSLTEKESW
HLASMDMTVLSTRFAAFDQQKGKSYIYRVRSVNKYGISEPSLPSEPVSLGQPLGAPAKPH
GVLSIRDTNTSVLLQWKEPKITEGIVGYYLYCSEVGSAQWKTINNKPITKTRFTVDGLQT
NKEYVFRVKSVGLAGNSVYSDESPAIRVKSAIYVPSHPSAITLLYCSGREMMIGWRAPAN
HGGDPVRGYYLDQREKSQSIWREINIQPAKERLYEVTGLQEGHFYQFRVFAANIVGLGNA
SEPSELFLCERWTMPEPGCPYDLEFREVRRNSLVLLWAEPIYKGQSEISGYIVEISEGAE
SEDWTPVTSEPVTETHFKVSGLQAGQTYRLRVSAVNAAGVGMSSVASEPVEAQTKAGTKE
IEIGVDNDGFIFLSFEAPEGTDKDVFKWSKNYGKAIEAGRARLENKNNRSVLTFTEASEQ
DLGLYTVELSGNPDASSSFTFTAEDLERLTELGWHIRNPLIALRSEGWQVDVSEQGSVRL
WLQTEPLSSAAVLRLILNDREISSTPTRKINFDKAQGLVEILFNEISRDEEGSYTAQLKD
GRAKNQFTLVFVDKKFQETLAKSQANRRNWKRKAGPHFEEFLSWTVTSDCEMIMKCKVTN
VSKDTRVKWFKDGMEFPQAVYEPTGVSTFTVPQVTRKELGVYKVVVSDNRGEDESVLELI
DDEFERLMKQLGKQCALSAGPVYIQSTAQGFKLYCSLKYYLSYMKTSWFFKEKRIDLEER
TKPGSSMQKVWIEILNPTENDKGKYTLEMFDGQETHKRFLDLSGQAFADALLEYQRLKQV
EFAEKNRARVTKGLPDVVAIMETKSLCLTCFADGDPVPEMFWLKNDREILSAGQYNIKNE
NKSSTLTINHVTMEDSGNYSIFVRNKHGTQTVIVTVSVYKHGEKPRADAVQM
NT seq 4299 nt   +upstreamnt  +downstreamnt
atgatacagacaataaagcagctgttcctggatcagtgcctgcaggatgaccatgaagga
cgcatcgagatccgcaaacatacggatgaacttctgcttttgttattgtgtcagtcacac
atgcagagctttcatgatgaagaggcctctctgagcgaattctatcccatcattcccggg
gacgtgatgtctgtgaaggagatcctgaccggacccaagttcccacgccaccggacatgg
gatgtcctgagagagacgctgtccaatgatgagctccacgagcgggaccagtggacgatg
ttcgggaatgaggctgagaaactggagatcggtgtgatcagaaaccagcgtgtcgtccgt
gagcgcgtggatcgattctctctgcgccgggaggcggagagaaaatcctcattgcacatg
aagtatattgaggatttgagcatgaaggctcctgatttccccatcccgctgagacctcac
actgtgtgggccgggatggacgtcaaactgtcctgttcggttcagggctgtccgactccc
agcgtcacatggtataaggatgacgttcctctccgaggagctctgccgtggaactacaaa
ctgacgcagaagttcggcctcaacgttttagagatcagaagatgttctgctgaagatgct
ggcgaatacaaggttattgcaaaaagttccctaggggaggcgacgtccagcgccaaattg
atagtcaactcacatgaaggggccgaggccaaactgaagcgctcgtggacgcctattcca
gagcctgacgctcagctggcctccacctttcctccaacatttgtgaaagaaggtgatgat
ttggttctgcagtgtagtttcacctcagctttattgccgttccaacaggatgtggtctgg
tacagagatgggcaagtgttgcgtcaatccagtcgtgtggagctgcagacgggtcagcga
tctgccagtctcaccctgaagagagtgcacaaggaacacgaaggcctgtacagtgtccgt
ctgcgcacctgggacgggagcgttgagcacagcgcctatgtctatgttaaagatggacct
gcggtggtggtgggagctccaggttctcctctacagctggagtgttcagatgtgaaccga
gattacgtgttcctctcatggattcctcccagcgcagacggagccgccgctgtacagggt
tacttcatagagaggtgtgacatcggtgttgggaagtgggaacgctgtaatgatgtggtc
cagaaggagtgtcattttcctgtcatgggactgaaggaaagcacaatgtaccagttccgc
gtgtgtgcagtcaatcaggcaggcatgggccgcccgtctaaacccactgaccccgtcctg
acctctgaccccatggagcccagcaggactatggtggtgaaggtggagcgcgggagagag
atagtgatcactaaggaccagctggagggtcaaatccgagtgccgtccccccccactgac
gtgcgagtttgtgagcttagcgacacctacgccgtgctgagctggaccgaaccggatccg
cggggcagagagcctctcacctacttcgtggagcggtccctaacagagaaggagagctgg
catctggctagtatggatatgacagttctgtctacgagatttgctgcgtttgatcaacag
aagggaaagtcatacatttaccgtgttcgttctgtcaacaagtacggcatcagcgaacca
tctcttcccagcgaacccgtctcactgggacaaccgctaggagctcccgctaagccacac
ggcgtcctgtccatccgagacaccaacacctcggtcctgctgcagtggaaggagcccaaa
ataacagagggcattgtgggatactatctgtactgcagtgaggttggaagtgcacagtgg
aagaccatcaacaataagcccatcaccaaaaccaggtttacagtcgacggcctgcagacc
aataaagagtatgtattccgggtaaagtctgtgggactggcgggaaacagtgtctactcc
gatgagtctcctgccattcgagtcaaatcagcaatatatgttccatcccatccatcagcc
atcactctactgtactgctccggacgagagatgatgattggctggagagccccggccaat
cacggaggagaccctgtgcgcggatactacctggaccagagggagaaatcccagagcatc
tggagagagatcaacatccaacctgctaaagaaagactgtacgaggtgacaggccttcag
gaaggacatttttaccagttcagagtttttgcggcaaatattgttggattgggcaacgct
tctgaacctagcgaattgtttttgtgcgagcgttggacgatgcctgagcctggttgtccg
tatgatctggagtttagagaagtgaggcggaactcactggtgctgctgtgggcggagcct
atatacaagggccaatcagagatcagcgggtatatagtggagatcagtgagggggcggag
tctgaggattggacacctgtgacaagtgagccggtgacggaaactcactttaaggtttca
ggtctgcaagcaggtcagacgtaccgcctccgtgtgtctgccgttaacgccgccggagtc
ggcatgtcttcggtggcgtctgagccggtggaagcgcagactaaagcaggaaccaaagag
attgagatcggagtggataatgacggcttcatcttcctgagctttgaagctcctgaaggc
acagataaagacgtctttaagtggagtaagaactacgggaaagcgattgaagccgggcga
gcccgattggagaacaaaaacaacaggtctgttcttaccttcacggaagcctcggagcag
gatttgggcctttacacagtggagctgagcggaaaccctgacgcctcgtctagtttcacc
ttcactgcggaggatcttgagaggctgacagaactcggctggcacatcagaaacccactg
atcgctctgaggtctgaaggctggcaggttgatgtatccgagcaaggaagtgtccgtctg
tggctgcagaccgaacctctcagcagcgccgcggttcttcggctcatcctcaatgacaga
gagatttccagcacaccgacccgtaagattaactttgacaaggcacaaggtctggtggag
atcctgtttaatgaaatatcaagagacgaagagggatcatacaccgcgcagctcaaagac
ggccgggccaagaaccagttcactctggtgtttgtggataaaaagtttcaggaaacactg
gccaaatctcaggccaacagacgaaactggaagagaaaggcgggtcctcatttcgaggag
tttttgtcatggacagtgacttcagattgtgaaatgattatgaagtgcaaggtcaccaac
gtgagcaaagatacgcgtgtgaagtggtttaaggacggaatggagtttcctcaggcggtg
tacgagcccacgggcgtcagcaccttcaccgtaccgcaggtgacgaggaaggagctgggt
gtgtataaagtcgtggtgtccgacaacagaggagaagatgagagcgtcctggaactgata
gatgatgagtttgagcgtctgatgaagcagctcggtaaacagtgcgcgctctctgctggt
cctgtgtacatccagagcactgcgcagggcttcaaactctactgctccctcaaatactac
ctgagctacatgaagaccagctggttcttcaaagagaagagaattgacttggaggagcgg
acgaagccgggcagcagcatgcagaaggtttggattgagatactcaaccccactgaaaac
gataaagggaagtacaccctggagatgttcgacggccaggaaacacacaagcgctttctg
gatttgtctggacaagcgttcgcagatgctttgctggaataccagagactgaagcaagtg
gagtttgctgagaaaaatcgagccagagtcacaaagggtcttcctgatgtggtggccata
atggagaccaagtctctgtgtctgacgtgttttgctgacggcgatcccgtgccggaaatg
ttctggctgaagaatgacagagaaatcctctccgccggccagtacaacatcaaaaacgag
aataaatcctccactctcaccataaaccacgtgaccatggaggactccggcaactacagc
atcttcgtgcgcaataaacatggaacgcagacggtcatcgtgactgtcagtgtttataaa
catggtgaaaaacctcgagcggatgcagtgcaaatgtaa

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