Garra rufa (doctor fish): 141342482
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Entry
141342482 CDS
T11039
Name
(RefSeq) myomesin-3-like
KO
K24495
myomesin
Organism
grf Garra rufa (doctor fish)
Pathway
grf04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
141342482
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
grf04990
]
141342482
Domain-containing proteins not elsewhere classified [BR:
grf04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
141342482
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
fn3
Ig_3
Ig_2
ig
Ig_DSCAM-DSCAML_C
V-set
Pur_ac_phosph_N
Tissue_fac
C2-set_2
fn3_2
Herpes_gE_N
TY-Chap3
Ntox30
CytoC_RC
Motif
Other DBs
NCBI-GeneID:
141342482
NCBI-ProteinID:
XP_073703040
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All DBs
Position
9:3758624..3845399
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AA seq
1432 aa
AA seq
DB search
MIQTIKQLFLDQCLQDDHEGRIEIRKHTDELLLLLLCQSHMQSFHDEEASLSEFYPIIPG
DVMSVKEILTGPKFPRHRTWDVLRETLSNDELHERDQWTMFGNEAEKLEIGVIRNQRVVR
ERVDRFSLRREAERKSSLHMKYIEDLSMKAPDFPIPLRPHTVWAGMDVKLSCSVQGCPTP
SVTWYKDDVPLRGALPWNYKLTQKFGLNVLEIRRCSAEDAGEYKVIAKSSLGEATSSAKL
IVNSHEGAEAKLKRSWTPIPEPDAQLASTFPPTFVKEGDDLVLQCSFTSALLPFQQDVVW
YRDGQVLRQSSRVELQTGQRSASLTLKRVHKEHEGLYSVRLRTWDGSVEHSAYVYVKDGP
AVVVGAPGSPLQLECSDVNRDYVFLSWIPPSADGAAAVQGYFIERCDIGVGKWERCNDVV
QKECHFPVMGLKESTMYQFRVCAVNQAGMGRPSKPTDPVLTSDPMEPSRTMVVKVERGRE
IVITKDQLEGQIRVPSPPTDVRVCELSDTYAVLSWTEPDPRGREPLTYFVERSLTEKESW
HLASMDMTVLSTRFAAFDQQKGKSYIYRVRSVNKYGISEPSLPSEPVSLGQPLGAPAKPH
GVLSIRDTNTSVLLQWKEPKITEGIVGYYLYCSEVGSAQWKTINNKPITKTRFTVDGLQT
NKEYVFRVKSVGLAGNSVYSDESPAIRVKSAIYVPSHPSAITLLYCSGREMMIGWRAPAN
HGGDPVRGYYLDQREKSQSIWREINIQPAKERLYEVTGLQEGHFYQFRVFAANIVGLGNA
SEPSELFLCERWTMPEPGCPYDLEFREVRRNSLVLLWAEPIYKGQSEISGYIVEISEGAE
SEDWTPVTSEPVTETHFKVSGLQAGQTYRLRVSAVNAAGVGMSSVASEPVEAQTKAGTKE
IEIGVDNDGFIFLSFEAPEGTDKDVFKWSKNYGKAIEAGRARLENKNNRSVLTFTEASEQ
DLGLYTVELSGNPDASSSFTFTAEDLERLTELGWHIRNPLIALRSEGWQVDVSEQGSVRL
WLQTEPLSSAAVLRLILNDREISSTPTRKINFDKAQGLVEILFNEISRDEEGSYTAQLKD
GRAKNQFTLVFVDKKFQETLAKSQANRRNWKRKAGPHFEEFLSWTVTSDCEMIMKCKVTN
VSKDTRVKWFKDGMEFPQAVYEPTGVSTFTVPQVTRKELGVYKVVVSDNRGEDESVLELI
DDEFERLMKQLGKQCALSAGPVYIQSTAQGFKLYCSLKYYLSYMKTSWFFKEKRIDLEER
TKPGSSMQKVWIEILNPTENDKGKYTLEMFDGQETHKRFLDLSGQAFADALLEYQRLKQV
EFAEKNRARVTKGLPDVVAIMETKSLCLTCFADGDPVPEMFWLKNDREILSAGQYNIKNE
NKSSTLTINHVTMEDSGNYSIFVRNKHGTQTVIVTVSVYKHGEKPRADAVQM
NT seq
4299 nt
NT seq
+upstream
nt +downstream
nt
atgatacagacaataaagcagctgttcctggatcagtgcctgcaggatgaccatgaagga
cgcatcgagatccgcaaacatacggatgaacttctgcttttgttattgtgtcagtcacac
atgcagagctttcatgatgaagaggcctctctgagcgaattctatcccatcattcccggg
gacgtgatgtctgtgaaggagatcctgaccggacccaagttcccacgccaccggacatgg
gatgtcctgagagagacgctgtccaatgatgagctccacgagcgggaccagtggacgatg
ttcgggaatgaggctgagaaactggagatcggtgtgatcagaaaccagcgtgtcgtccgt
gagcgcgtggatcgattctctctgcgccgggaggcggagagaaaatcctcattgcacatg
aagtatattgaggatttgagcatgaaggctcctgatttccccatcccgctgagacctcac
actgtgtgggccgggatggacgtcaaactgtcctgttcggttcagggctgtccgactccc
agcgtcacatggtataaggatgacgttcctctccgaggagctctgccgtggaactacaaa
ctgacgcagaagttcggcctcaacgttttagagatcagaagatgttctgctgaagatgct
ggcgaatacaaggttattgcaaaaagttccctaggggaggcgacgtccagcgccaaattg
atagtcaactcacatgaaggggccgaggccaaactgaagcgctcgtggacgcctattcca
gagcctgacgctcagctggcctccacctttcctccaacatttgtgaaagaaggtgatgat
ttggttctgcagtgtagtttcacctcagctttattgccgttccaacaggatgtggtctgg
tacagagatgggcaagtgttgcgtcaatccagtcgtgtggagctgcagacgggtcagcga
tctgccagtctcaccctgaagagagtgcacaaggaacacgaaggcctgtacagtgtccgt
ctgcgcacctgggacgggagcgttgagcacagcgcctatgtctatgttaaagatggacct
gcggtggtggtgggagctccaggttctcctctacagctggagtgttcagatgtgaaccga
gattacgtgttcctctcatggattcctcccagcgcagacggagccgccgctgtacagggt
tacttcatagagaggtgtgacatcggtgttgggaagtgggaacgctgtaatgatgtggtc
cagaaggagtgtcattttcctgtcatgggactgaaggaaagcacaatgtaccagttccgc
gtgtgtgcagtcaatcaggcaggcatgggccgcccgtctaaacccactgaccccgtcctg
acctctgaccccatggagcccagcaggactatggtggtgaaggtggagcgcgggagagag
atagtgatcactaaggaccagctggagggtcaaatccgagtgccgtccccccccactgac
gtgcgagtttgtgagcttagcgacacctacgccgtgctgagctggaccgaaccggatccg
cggggcagagagcctctcacctacttcgtggagcggtccctaacagagaaggagagctgg
catctggctagtatggatatgacagttctgtctacgagatttgctgcgtttgatcaacag
aagggaaagtcatacatttaccgtgttcgttctgtcaacaagtacggcatcagcgaacca
tctcttcccagcgaacccgtctcactgggacaaccgctaggagctcccgctaagccacac
ggcgtcctgtccatccgagacaccaacacctcggtcctgctgcagtggaaggagcccaaa
ataacagagggcattgtgggatactatctgtactgcagtgaggttggaagtgcacagtgg
aagaccatcaacaataagcccatcaccaaaaccaggtttacagtcgacggcctgcagacc
aataaagagtatgtattccgggtaaagtctgtgggactggcgggaaacagtgtctactcc
gatgagtctcctgccattcgagtcaaatcagcaatatatgttccatcccatccatcagcc
atcactctactgtactgctccggacgagagatgatgattggctggagagccccggccaat
cacggaggagaccctgtgcgcggatactacctggaccagagggagaaatcccagagcatc
tggagagagatcaacatccaacctgctaaagaaagactgtacgaggtgacaggccttcag
gaaggacatttttaccagttcagagtttttgcggcaaatattgttggattgggcaacgct
tctgaacctagcgaattgtttttgtgcgagcgttggacgatgcctgagcctggttgtccg
tatgatctggagtttagagaagtgaggcggaactcactggtgctgctgtgggcggagcct
atatacaagggccaatcagagatcagcgggtatatagtggagatcagtgagggggcggag
tctgaggattggacacctgtgacaagtgagccggtgacggaaactcactttaaggtttca
ggtctgcaagcaggtcagacgtaccgcctccgtgtgtctgccgttaacgccgccggagtc
ggcatgtcttcggtggcgtctgagccggtggaagcgcagactaaagcaggaaccaaagag
attgagatcggagtggataatgacggcttcatcttcctgagctttgaagctcctgaaggc
acagataaagacgtctttaagtggagtaagaactacgggaaagcgattgaagccgggcga
gcccgattggagaacaaaaacaacaggtctgttcttaccttcacggaagcctcggagcag
gatttgggcctttacacagtggagctgagcggaaaccctgacgcctcgtctagtttcacc
ttcactgcggaggatcttgagaggctgacagaactcggctggcacatcagaaacccactg
atcgctctgaggtctgaaggctggcaggttgatgtatccgagcaaggaagtgtccgtctg
tggctgcagaccgaacctctcagcagcgccgcggttcttcggctcatcctcaatgacaga
gagatttccagcacaccgacccgtaagattaactttgacaaggcacaaggtctggtggag
atcctgtttaatgaaatatcaagagacgaagagggatcatacaccgcgcagctcaaagac
ggccgggccaagaaccagttcactctggtgtttgtggataaaaagtttcaggaaacactg
gccaaatctcaggccaacagacgaaactggaagagaaaggcgggtcctcatttcgaggag
tttttgtcatggacagtgacttcagattgtgaaatgattatgaagtgcaaggtcaccaac
gtgagcaaagatacgcgtgtgaagtggtttaaggacggaatggagtttcctcaggcggtg
tacgagcccacgggcgtcagcaccttcaccgtaccgcaggtgacgaggaaggagctgggt
gtgtataaagtcgtggtgtccgacaacagaggagaagatgagagcgtcctggaactgata
gatgatgagtttgagcgtctgatgaagcagctcggtaaacagtgcgcgctctctgctggt
cctgtgtacatccagagcactgcgcagggcttcaaactctactgctccctcaaatactac
ctgagctacatgaagaccagctggttcttcaaagagaagagaattgacttggaggagcgg
acgaagccgggcagcagcatgcagaaggtttggattgagatactcaaccccactgaaaac
gataaagggaagtacaccctggagatgttcgacggccaggaaacacacaagcgctttctg
gatttgtctggacaagcgttcgcagatgctttgctggaataccagagactgaagcaagtg
gagtttgctgagaaaaatcgagccagagtcacaaagggtcttcctgatgtggtggccata
atggagaccaagtctctgtgtctgacgtgttttgctgacggcgatcccgtgccggaaatg
ttctggctgaagaatgacagagaaatcctctccgccggccagtacaacatcaaaaacgag
aataaatcctccactctcaccataaaccacgtgaccatggaggactccggcaactacagc
atcttcgtgcgcaataaacatggaacgcagacggtcatcgtgactgtcagtgtttataaa
catggtgaaaaacctcgagcggatgcagtgcaaatgtaa
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integrated database retrieval system