Garra rufa (doctor fish): 141342542
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Entry
141342542 CDS
T11039
Symbol
ubqln4
Name
(RefSeq) ubiquilin-4
KO
K04523
ubiquilin
Organism
grf Garra rufa (doctor fish)
Pathway
grf04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
141342542 (ubqln4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
grf04131
]
141342542 (ubqln4)
03051 Proteasome [BR:
grf03051
]
141342542 (ubqln4)
Membrane trafficking [BR:
grf04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Selective cargos
141342542 (ubqln4)
Proteasome [BR:
grf03051
]
Eukaryotic proteasome
Proteasome interacting proteins (PIPs)
UBL-UBA shuttle proteins
141342542 (ubqln4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UBQLN1
ubiquitin
STI1-HOP_DP
Rad60-SLD
Ubiquitin_5
YukD
Rad60-SLD_2
Dsc3_N
Symplekin_C
Motif
Other DBs
NCBI-GeneID:
141342542
NCBI-ProteinID:
XP_073703113
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Position
9:8493504..8499697
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AA seq
559 aa
AA seq
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MAENSGTDPAVETNTEENAAASATIIKVTVKTPKDKEEIAIAEDSSVAQFKEEISKRFKA
KQDQLVLIFAGKILKDGDTLGQHGIKDGLTVHLVIKTAQKASGGGSSQTSASSGPGPSQG
NTTGTAIPSPAGNLGTPQGSGPSPTPTQPPNVLAGFGDLSGLANLGMGSANFMELQQQMQ
RQLMSNPEMLSQIMENPLVQSMMSNPDLMRQMIVANPQMQQLMERNPEISHMLNNPELMR
QTMELARNPAMMQEMMRNQDRALSNLESIPGGYNALRRMYTDIQEPMFSAAREQFGNNPF
SALGGNADNSGTQPSRTENREPLPNPWGPPDTAAATTTTSGTVTTTSSTTSSTTPSVSNP
LGISSSSLGNGMFNSPGMQSLMQQISENPQLMQNMLSAPYMRTMMQSLAQNPDIASQVLM
NNPLFAGNPQLQEQMRAQLPVFLQQMQNPEALTVMTNPRAMRALMQIQEGLQTLQTEAPG
LMPSLVPGGMAAGIPGAPLPTGVNVTPENPPPSGQGPAPAPAPAPAPTPAAGTNTAQQQL
MQQMLQMFAGGNASQLSTV
NT seq
1680 nt
NT seq
+upstream
nt +downstream
nt
atggcggagaatagcggcacggatcctgccgtggagacgaacactgaggaaaatgccgcc
gctagcgcgactatcattaaggtcaccgtcaaaacaccgaaggacaaagaagaaatagcc
atcgccgaggattcatctgtcgcgcagtttaaagaggaaatctccaaaagatttaaggcg
aagcaggaccagttggttctgatttttgccggtaagatcctaaaggatggagacacgctc
ggtcagcatggcattaaagacggactcacggttcacctggtcatcaaaaccgcacaaaag
gcttcaggtggtggtagttcgcagacctctgcctcttctggccctggaccatcacagggc
aacaccactggaaccgctatccccagcccggccggcaacctgggcacaccccagggcagt
gggccgtccccaaccccgacacagccacccaatgtactagctgggtttggggacctttcg
ggcttggctaacctcggtatgggatctgccaacttcatggagcttcagcaacagatgcag
cgacagctcatgtccaaccccgagatgctgtctcagatcatggagaacccgcttgtgcag
agcatgatgtccaaccccgacctgatgaggcagatgatagtggccaacccacagatgcag
caactaatggaacgcaacccagagatttcacacatgctcaataacccagagctcatgaga
cagacaatggagttggcacgaaacccagccatgatgcaagagatgatgcgtaaccaggac
cgggcgcttagcaacctcgagagtattcccgggggttacaatgctcttcggaggatgtac
acagatattcaagagcccatgtttagtgctgcacgtgaacagtttggaaataaccccttc
tcggcattgggtggaaatgctgataactctggaacacagccctctaggacagaaaaccga
gagcccctgccaaatccctggggtccccctgacactgccgccgccaccaccaccacctct
gggacagtgaccaccaccagctccaccacaagctcaaccacacccagtgtgtccaatccc
cttggcatcagctcctctagccttggaaatggtatgttcaacagtcctggcatgcagagc
ctaatgcaacagatctctgagaaccctcagcttatgcagaacatgctttctgctccttat
atgcgcaccatgatgcagtctctggcccagaatcctgatattgcctcacaggtattgatg
aacaaccctctctttgccggaaatccacagctgcaggagcaaatgagagcgcagttacct
gtatttctacagcagatgcagaacccagaagcccttactgtcatgacaaatcctcgagcc
atgcgagccctaatgcagatccaggagggactgcaaactcttcaaactgaagcccctggt
ctcatgcccagtctggtacctggtgggatggctgctggtatccctggtgccccactgccc
acaggggtgaatgtgactccagagaaccctccgccctcaggccagggccctgctcccgct
cctgctcctgctcccgctcccacccccgctgctggaacaaacaccgcccagcagcagctc
atgcaacagatgctacagatgttcgctggagggaatgcatcgcagctcagcacagtctga
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