KEGG   Garra rufa (doctor fish): 141342575
Entry
141342575         CDS       T11039                                 
Symbol
itga10
Name
(RefSeq) integrin alpha-10 isoform X1
  KO
K06586  integrin alpha 10
Organism
grf  Garra rufa (doctor fish)
Pathway
grf04510  Focal adhesion
grf04512  ECM-receptor interaction
grf04810  Regulation of actin cytoskeleton
grf04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:grf00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    141342575 (itga10)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    141342575 (itga10)
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    141342575 (itga10)
   04810 Regulation of actin cytoskeleton
    141342575 (itga10)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:grf04515]
    141342575 (itga10)
Cell adhesion molecules [BR:grf04515]
 Integrins
  Integrin alpha subunits
   141342575 (itga10)
SSDB
Motif
Pfam: VWA FG-GAP Integrin_A_Ig_2 Integrin_A_Ig_1 Integrin_A_Ig_3 VWA_2 FG-GAP_3 FG-GAP_2 vWA_SIBA-E ITGAX-like_Ig_3 VAS1_LD
Other DBs
NCBI-GeneID: 141342575
NCBI-ProteinID: XP_073703159
LinkDB
Position
9:complement(31616489..31691484)
AA seq 1171 aa
MEIHKYLLLLKITILLKGLCECFNIDVKRPRIFSGPEDALFGFSVLQHENNGEKSILVGA
PWDGPQNNRKGDIYKCIVGDEMNSNCSKVNLGENAFQNVSRNLKNSHLGMTLTPAASDGF
LACAPLWSQECGTSLFSTGICASVTNDMEPKDVIAPTAQRCTTYMDIVIVLDGSNSIYPW
YEVQNFLSNILSKFHISPEQMQVGVLQYGEISVHEWSLRDYQTTEDVVEAAKNISRQEGR
ETRTAYAIQMACTEAFSPDRGAREGATKVMIVVTDGESHDGEDLPDSLAECEKRNITRYA
IAVLGHYIRRQQDPETFINEIKYIASDPDEKYFFNVTDEAALNDIVDALGDRIFSLEGTL
GYNESAFLMEMSQIGFSTHILDDGILFGMVGAYDWEGGVLKESKEGQLKPSREAFEKEFP
LELKNHAAYLGYTVSSVVVGDWRRLYVAGAPRFKHKGKVILFDLTPEGDVIITQALNGEQ
IGSYFGSEVCVVDVDQDGITDILLIAAPMFLGAGNKETGKVYVYCLDGDGFAPNGTLHSQ
KKAQDARFGYAMAVAPDLNHDGYADLLVGAPLEDDHQGALYIYHGDEYYIIPQYKQRIPG
SSLSPGLQYFGRSLSALLDLDGDELLDLAVGAQGTAVLLKSRSIVQINVSLSFQPHSINV
IQKNCYRAGRDSACLNATVCFLALSRSPGSYGTYFDMQMGAMLDDRKILARALFDYNSQR
QTLMGVVARVGETMCYTLPFHVFDTADYIRPISFTLRFKINDTESGPVLDEGWPTTFKKS
IPFFKDCGEDDVCLTDLVLQAHMDISGTRQQPYVIRSTRRRLAVEVQLQNRLENAYNTSL
TLHYSKNLHFSSLSIREDALFKIECTDLSSTSHSCNVSYPVFRSQSKVNFMLEFEFSCTS
LISEVQMKLIASSDSVESEGTLSDNSVQLQSIVQYEPDLFITSDSNLNRYEVHPTRTMSE
GTGPEFHTHFKVQNPGCYAVSNLELSVNLPAVASGDRVFATVVDASSFNSSGVNCSIVND
LSKLKSSQRDVRPLHPEDMKKTELLNCTSSWCVEVVCHIQQLLKGQTALIRITRRIHDNF
FRQAKFKAVTIVGSYQLSARESSLITMGNAALLRETVLEVLKGRSIPISLWILIGSIIGG
LLLLALLVFILWKLGFFTRKQRKDEDDNDDN
NT seq 3516 nt   +upstreamnt  +downstreamnt
atggagattcacaagtacctgctgttgttgaagatcactattcttctcaaagggctgtgt
gagtgttttaatattgatgtgaagaggccacgaatcttcagtgggcctgaagatgctctg
tttggcttctctgtgttacagcatgagaacaatggagagaaatcaatcttggttggtgct
ccatgggatggaccacaaaataacaggaagggggatatttacaagtgcattgtgggagat
gagatgaattccaattgctcaaaagttaacctaggtgaaaatgcatttcaaaacgtgtct
cgaaatcttaaaaactctcatttggggatgacgctgacccctgctgcttcagatggcttc
ctggcctgcgctccactatggtcccaggaatgtggtacatctctgttcagcacaggaatc
tgtgcatctgtcaccaatgacatggagcccaaggatgtcattgcacccactgcacagaga
tgcaccacttacatggatatagtgattgttttagatggttctaatagcatctacccatgg
tatgaggtgcaaaacttccttagcaacattctcagcaagttccacataagccctgagcaa
atgcaggtaggtgtcctgcagtatggggagatatcggtccatgagtggtctctcagggac
tatcagacaacagaggatgtggttgaagccgccaagaacatcagtcgtcaagagggacgg
gagacccgaaccgcatacgccatccaaatggcctgcactgaggcctttagtccagataga
ggagcgagggaaggggccactaaagtgatgatagtcgtgacagatggagagtcccatgat
ggcgaagatcttcccgattccctggctgaatgtgagaaacgtaacatcaccagatacgcc
atcgctgtattaggtcattacatccgcagacagcaagatccagagacctttatcaatgag
attaagtacattgccagtgaccccgatgagaaatacttcttcaacgtgacggatgaggct
gctctaaatgacattgtagatgcactgggggatcgcatttttagtctggaggggaccctg
ggatacaatgaaagtgcctttctcatggagatgtctcagattggtttttcgacacatatt
ttggatgatggcatcttatttggcatggtgggtgcatatgattgggagggaggcgtcctg
aaggagagcaaagaagggcagctaaagccttcaagagaagcctttgagaaagagtttcca
ctggagctaaagaatcatgcagcctacctaggttacacagtgtcctcagtggttgtaggt
gactggaggaggctgtatgttgctggtgcgcctagattcaagcacaaaggaaaggtcatt
ctatttgacctcaccccagaaggcgacgtcataatcacacaggcgctaaatggagaacag
attggctcatattttggcagtgaggtgtgcgtggtggatgtggatcaggatggaataaca
gacatcctgctcatagctgctcccatgttcctgggagcaggaaacaaagaaacaggcaaa
gtctatgtctactgtttggatggggatggttttgcccctaacggtacgctacattctcag
aaaaaagcacaggatgcacgctttggttatgctatggcagtagcccctgacctaaaccat
gacggatatgccgacctgcttgtcggagcgccgcttgaggatgaccaccagggagctctt
tacatctaccatggcgacgaatactacatcatacctcagtataaacagcgcatcccaggc
tcctctctctctccagggctgcagtattttggccgtagcctgagcgctctgctggatctg
gatggggatgagttactggatcttgctgtgggagcacagggcactgccgtcctgctgaag
tcacgcagtatagtgcagatcaacgtcagcctgtccttccagccacactccataaatgtg
atacagaagaactgctacagagctggtcgagactccgcatgccttaacgccacggtttgc
tttctggccctgtctcgctcccctggctcttatggcacatattttgatatgcagatgggg
gccatgttggatgacagaaagatcttggctcgtgctctgtttgactacaactcccagagg
cagaccctaatgggcgttgtagctcgtgtgggggagaccatgtgttacacactaccattt
catgtctttgatacagctgattacatccgaccaatcagcttcactttgcgcttcaaaatc
aatgacacagagagcggcccggtactagatgagggctggccaacaacattcaagaagtct
atcccattcttcaaagactgtggggaggatgatgtgtgcttaactgatctggttttacag
gcccatatggacatttctggaacaaggcagcaaccgtatgttatacgcagcactcggcga
cggcttgcagtagaagtgcagctacaaaaccggctagaaaacgcctataacacgagtctc
actcttcattactccaaaaacctgcatttcagcagtctaagtataagggaagacgccctg
tttaagattgaatgcacagatctaagctcaaccagtcactcctgtaatgtcagttaccca
gtgttccgctctcagtcgaaggtgaacttcatgttggaattcgagttcagttgtacgtct
ctcatcagtgaagtccagatgaagcttattgcttccagtgacagtgtggagagtgaaggc
acactttcagacaacagtgtacagttgcagagtattgtacagtatgaaccagatctcttc
ataacaagtgactccaacctaaaccgctatgaggttcacccgaccaggaccatgtcagaa
gggacaggacctgagttccacacacatttcaaggtgcagaatccaggctgttacgctgtc
agtaatctggagctcagcgtcaatttgcctgctgtggcttcaggagacagagttttcgcg
actgtggttgatgcttcctcctttaattcttcaggtgtgaactgcagtatagtcaatgat
ctttctaaattaaagtccagtcagagagatgtgcgtccacttcatccagaagacatgaag
aaaactgaattattgaattgcacttcctcttggtgtgtggaggttgtgtgtcatatccag
cagctactgaagggacaaacagccttgatccgcatcactaggaggatacatgacaacttc
ttcagacaggccaagtttaaagcagtgacaattgtgggctcttaccagctgtcagctcga
gagtccagtctgattacaatgggaaatgctgccctcttgagggagacggttttggaagtg
ctgaaggggcgttcgatcccaatctctctctggattctgattggcagcatcattggagga
ctgctgcttcttgcactcttagtattcatcctttggaagttggggtttttcacaaggaaa
cagaggaaggatgaggatgacaacgatgacaactga

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