Garra rufa (doctor fish): 141342589
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Entry
141342589 CDS
T11039
Symbol
u2af2a
Name
(RefSeq) U2 small nuclear RNA auxiliary factor 2a isoform X1
KO
K12837
splicing factor U2AF 65 kDa subunit
Organism
grf Garra rufa (doctor fish)
Pathway
grf03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
141342589 (u2af2a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
grf03041
]
141342589 (u2af2a)
Spliceosome [BR:
grf03041
]
Complex A
U2 snRNP components
U2 related factors
141342589 (u2af2a)
Complex B
141342589 (u2af2a)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_MUD2_C
Transformer
RRM_occluded
DUF8489
RRM_7
F07F6_N
Motif
Other DBs
NCBI-GeneID:
141342589
NCBI-ProteinID:
XP_073703177
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All DBs
Position
9:26592609..26602480
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AA seq
476 aa
AA seq
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MSDFDEFERQLTENKQADRDKENKHHRRSGSRSRSRDRDRKRRSRDRDRERRGGSRDRHG
DSKDRRHRRSRSPHREKKKIKVKKYWDVPPPGFEHITPMQYKAMQAAGQIPATALLPTMT
PEGLAVTPTPVPVVGSQMTRQARRLYVGNIPFGITEESMMDFFNAQMRLGGLTQAPGNPV
LAVQINQDKNFAFLEFRSVDETTQAMAFDGIIFQGQSLKIRRPHDYQPLPGMSENPSVYV
PGTSLFCSPNSCVVSTVVPDSAHKLFIGGLPNYLNDDQVKELLTSFGPLKAFNLVKDSAT
GLSKGYAFCEYVDVNISDQAIAGLNGMQLGDKKLLVQRASVGSKNTTLTGINQTPVTLQV
PGLVNSSVSQMGGIPTEVLCLMNMVAPEELLDDEEYEEIVEDVRDECSKYGQVKSIEIPR
PVDGVEVPGTGKIFVEFMSVFDSQKAMQGLTGRKFANRVVVTKYCDPDAYHRRDFW
NT seq
1431 nt
NT seq
+upstream
nt +downstream
nt
atgtcagattttgacgagtttgagagacagctgaccgaaaacaagcaagcggacagagat
aaggagaacaaacatcaccggcgcagtggctcgagaagtcgcagcagagaccgggacagg
aaaaggaggagtcgggaccgggacagagaaaggagaggcggcagccgggatcgtcacgga
gacagcaaggaccgcagacacagacgcagtcgctcaccacaccgtgaaaagaaaaagatt
aaagtgaaaaaatattgggatgttcctcctcctggatttgagcacatcacacccatgcag
tacaaagctatgcaggctgctggtcagatcccggccactgctctgctacccacaatgacc
cctgagggtctggctgtgaccccaacacctgttcctgtcgtgggcagtcagatgactcga
caggcccggcggctttatgtcggcaacatcccatttggcatcacagaggagtctatgatg
gacttcttcaatgctcagatgcgtttaggtggcctgactcaggccccaggtaacccagtc
cttgctgttcagatcaaccaggacaagaattttgcctttttggagttccgttcggtggat
gagacgacacaggccatggcatttgatggcataattttccagggacaaagtttaaagatt
cgcaggccacacgattaccagcctctgccaggcatgagtgagaatcccagtgtctatgtc
ccaggcacgtctctcttttgctcccccaattcttgcgttgtctctacggtggtgcctgat
tcggcccataaactcttcattggcggtctgccaaattacctcaacgatgaccaggtcaag
gaattgctaacgtcgtttggccctctaaaggccttcaatttggtgaaagacagcgcaaca
ggcctctctaagggctatgccttctgtgaatatgttgatgtcaatatcagtgaccaggcc
atcgcggggctaaacgggatgcagctgggtgacaaaaaactcctggtccagagagcaagc
gtcggctccaagaacaccacactgacgggtataaaccagactccagttacccttcaagtt
ccaggtctcgtaaacagctcggtgagtcagatgggcggcattcccacagaagtattgtgt
ctgatgaacatggtggctccagaggagctgctggatgatgaagagtatgaggagatcgtg
gaagacgtcagagacgagtgctccaaatacggccaggtcaagagcatcgagatcccacgt
cctgtcgacggcgttgaagttcctggcactggaaagatcttcgtggagttcatgtcagtg
tttgactcccagaaggcaatgcaaggcttaactggaaggaaattcgcaaacagagtggtg
gtgactaaatactgcgaccctgatgcctaccaccgccgcgacttctggtag
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