Garra rufa (doctor fish): 141342615
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Entry
141342615 CDS
T11039
Symbol
atg5
Name
(RefSeq) autophagy protein 5
KO
K08339
autophagy-related protein 5
Organism
grf Garra rufa (doctor fish)
Pathway
grf04136
Autophagy - other
grf04140
Autophagy - animal
grf04216
Ferroptosis
grf04621
NOD-like receptor signaling pathway
grf04622
RIG-I-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
141342615 (atg5)
04136 Autophagy - other
141342615 (atg5)
09143 Cell growth and death
04216 Ferroptosis
141342615 (atg5)
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
141342615 (atg5)
04622 RIG-I-like receptor signaling pathway
141342615 (atg5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
grf04131
]
141342615 (atg5)
03029 Mitochondrial biogenesis [BR:
grf03029
]
141342615 (atg5)
Membrane trafficking [BR:
grf04131
]
Autophagy
Autophagosome formation proteins
Atg12 conjugation proteins
141342615 (atg5)
Mitochondrial biogenesis [BR:
grf03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
141342615 (atg5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG5_UblA
ATG5_UblB
ATG5_HBR
DUF6782
Motif
Other DBs
NCBI-GeneID:
141342615
NCBI-ProteinID:
XP_073703209
LinkDB
All DBs
Position
9:41620811..41653835
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AA seq
277 aa
AA seq
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MIMADDKDVLRDVWFGRIPACFTLSPEETTEREAEPYYLLLPRVSYLTLVTDKVKKHFHK
ARKAEDVEEMWFEYEGTPLKWHYPIGVLFDLHASNTALPWNVTVRFKNFPERDLLHCPSN
SVIEAHFMSCIKEADALKHKSQVINDMQKKDHKQLWMGLQNDKFDQFWAMNRKLMEYPTE
EGGFRYIPFRIYQTMSDRPFIQKLFRPVSPEGHTLTLGDLLKELFPAAICAEDEPKRFQV
MIHGIEPLLETPVQWLSEHLSHPDNFLHISIIPAPSD
NT seq
834 nt
NT seq
+upstream
nt +downstream
nt
atgataatggcagatgacaaggatgtactccgagatgtttggttcggacggataccggcc
tgtttcacactgtctccagaggaaaccacagagagagaggcagaaccctactatctgctc
ctcccacgggtcagttacctgacgctagtcactgataaagtcaagaaacattttcacaaa
gccaggaaggcagaagatgtggaggagatgtggtttgaatatgagggaacgcctctcaag
tggcactatcccattggcgtgttgtttgatctccatgcttcaaatacagctctgccttgg
aatgtcacagtgcgttttaagaacttcccagagcgtgacctgcttcactgcccatcaaac
tctgtgatagaagcgcatttcatgtcatgcattaaagaggcagatgcactcaaacacaaa
agccaagtcatcaacgacatgcagaaaaaagaccataaacaactgtggatgggtctgcag
aatgataaattcgaccagttctgggccatgaatcgtaaactcatggagtatcctactgaa
gagggaggcttccgctatattccctttagaatatatcagacaatgagtgacagaccgttc
atccaaaagctcttccgacctgtgtctcctgagggccacacgcttacattgggagacctg
ctgaaggagctgtttcctgctgccatatgtgcggaagacgagccaaagagattccaggtt
atgattcacggcattgaaccactgctggaaacacccgtccagtggctgagcgaacacttg
agccacccggacaactttctccacatcagcatcatcccagcaccaagtgactga
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