Garra rufa (doctor fish): 141342623
Help
Entry
141342623 CDS
T11039
Symbol
zc3h12aa
Name
(RefSeq) endoribonuclease ZC3H12A
KO
K18668
ribonuclease ZC3H12 [EC:3.1.-.-]
Organism
grf Garra rufa (doctor fish)
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
grf03019
]
141342623 (zc3h12aa)
Messenger RNA biogenesis [BR:
grf03019
]
Eukaryotic type
mRNA degradation factors
Other degradation factors
RNases
141342623 (zc3h12aa)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Zc3h12a
UBA_6
Regnase_1_C
zf-CCCH_2
zf-CCCH_4
zf-CCCH
RuvA_C
Motif
Other DBs
NCBI-GeneID:
141342623
NCBI-ProteinID:
XP_073703220
LinkDB
All DBs
Position
9:48956760..48969661
Genome browser
AA seq
575 aa
AA seq
DB search
MQSRCYHQPAGLGQEGPDLRDLQMKVDFFRKLGYSSQEVKAALRKLGLGTDTNAVLGELV
RSGAKAMPSSSSDSDDGGFSLPHRGGGSPRGQASALEDTTEPESDLKPIVIDGSNVAMSH
GNKEVFSCRGIELAVNYFLDRGHRNITVFVPSWRKEQPRPDVPISDQHILEELERKKILV
FTPSRRVGGKRVVCYDDRFIVKLAHDLDGIIVSNDTYRDLQSERPEWKRCIEERLLMYSF
VNDKFMPPDDPLGRHGPNLDNFLRKKAMLLDQKRQLCPYGKKCTYGIKCKFYHPERTNQS
QRSLADELRENARLSGSKEDSRVTGPLRGMYPRNDPGFGSCSPSLEQELEQKLSLDPKSS
ERRDVMPQYWDNILSTKKPLKTATVGQRSASYTTNPSSIFSSDSGLGSYESQFSEPSQST
DELHSMRSGHPLMSGNPGLPAGGQRYYDNMNPLSNYQPNYGAYSSLPMPNHVQRYSLPAY
GAWSYPFFLPQATSLPEPLPCPSSHRSPNGYGSQQHSAMPQSNAFQEEREEVRKKLHAIF
NPHHVNKVMEMFPQLKDAQHLAAEVLKLKSRGEFF
NT seq
1728 nt
NT seq
+upstream
nt +downstream
nt
atgcagtcgaggtgttaccatcaacccgctggcctgggtcaagaagggcctgacctccgt
gacctgcagatgaaggtggacttctttcgtaagctgggttactcttcacaagaggtgaag
gcggccctgaggaagctcggcctgggaacggacaccaacgcggtgctgggggagctggtg
cgttcaggggcgaaggccatgccctcctctagctctgacagcgatgatggtgggttcagt
ttgccccatcggggaggaggctcacctaggggacaagcttcagcgctggaggacacaact
gaacccgaaagtgacctgaagcctattgttatagatggcagcaacgtggccatgagtcat
gggaacaaggaagtgttttcctgccgcgggattgagttggcggttaattacttccttgac
cgaggacacagaaatatcactgtgtttgtgccttcctggagaaaagagcagcccaggcct
gatgtacctatttcagatcagcatattttggaagagctggaaaggaagaagattcttgtg
tttacaccttcgagaagggtcggaggaaagcgtgtggtctgctatgacgatcgctttatt
gtcaaattggctcatgacctagatggcattatagtgtccaacgacacatatcgtgacctg
caaagtgaacgtccggagtggaaacgttgcattgaggagagattgcttatgtactccttt
gttaatgacaagttcatgccacccgatgaccctcttggccgtcatggacccaatttagat
aattttcttaggaaaaaagcaatgttgcttgaccagaagcgacaactctgcccatatgga
aaaaagtgcacatatgggatcaagtgcaagttctaccacccagagcgcacaaaccagtca
cagcgttctctagctgatgagcttcgagagaatgccagactgtctggttcaaaagaggac
agcagagtaactgggccactaagaggaatgtacccaagaaatgaccctggttttggttcc
tgctcaccctccttggagcaagaactagaacaaaaactcagcttggatcccaagagctct
gagaggagggatgtcatgcctcagtactgggataacattttgtccacaaaaaaaccctta
aaaacagccacagtgggacaacgcagtgcttcttacacaacaaacccttcgtccattttc
agttctgactcaggacttggatcctacgaaagccagttctcagagccatctcagagcacc
gatgagttacatagcatgagatccggtcatccattgatgtctggtaaccctggcctacct
gcaggtggccagcggtactatgacaacatgaatcctttatccaactatcagcctaactat
ggtgcctacagctccctacctatgcccaatcatgtccaacgttacagtcttcctgcttac
ggtgcctggtcttaccctttcttcttaccgcaggcgaccagtttacccgaacctttaccc
tgtcctagctctcacagatctcccaatggctatggaagccagcagcactcagccatgcca
cagtctaacgctttccaggaagaaagagaggaggtcaggaagaagctccatgcgattttt
aacccgcatcatgtaaacaaagttatggaaatgttcccacaactgaaagatgcgcagcac
ctcgctgcagaggttctcaaactcaagtcgaggggagagttcttctga
DBGET
integrated database retrieval system