KEGG   Garra rufa (doctor fish): 141342623
Entry
141342623         CDS       T11039                                 
Symbol
zc3h12aa
Name
(RefSeq) endoribonuclease ZC3H12A
  KO
K18668  ribonuclease ZC3H12 [EC:3.1.-.-]
Organism
grf  Garra rufa (doctor fish)
Brite
KEGG Orthology (KO) [BR:grf00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:grf03019]
    141342623 (zc3h12aa)
Messenger RNA biogenesis [BR:grf03019]
 Eukaryotic type
  mRNA degradation factors
   Other degradation factors
    RNases
     141342623 (zc3h12aa)
SSDB
Motif
Pfam: RNase_Zc3h12a UBA_6 Regnase_1_C zf-CCCH_2 zf-CCCH_4 zf-CCCH RuvA_C
Other DBs
NCBI-GeneID: 141342623
NCBI-ProteinID: XP_073703220
LinkDB
Position
9:48956760..48969661
AA seq 575 aa
MQSRCYHQPAGLGQEGPDLRDLQMKVDFFRKLGYSSQEVKAALRKLGLGTDTNAVLGELV
RSGAKAMPSSSSDSDDGGFSLPHRGGGSPRGQASALEDTTEPESDLKPIVIDGSNVAMSH
GNKEVFSCRGIELAVNYFLDRGHRNITVFVPSWRKEQPRPDVPISDQHILEELERKKILV
FTPSRRVGGKRVVCYDDRFIVKLAHDLDGIIVSNDTYRDLQSERPEWKRCIEERLLMYSF
VNDKFMPPDDPLGRHGPNLDNFLRKKAMLLDQKRQLCPYGKKCTYGIKCKFYHPERTNQS
QRSLADELRENARLSGSKEDSRVTGPLRGMYPRNDPGFGSCSPSLEQELEQKLSLDPKSS
ERRDVMPQYWDNILSTKKPLKTATVGQRSASYTTNPSSIFSSDSGLGSYESQFSEPSQST
DELHSMRSGHPLMSGNPGLPAGGQRYYDNMNPLSNYQPNYGAYSSLPMPNHVQRYSLPAY
GAWSYPFFLPQATSLPEPLPCPSSHRSPNGYGSQQHSAMPQSNAFQEEREEVRKKLHAIF
NPHHVNKVMEMFPQLKDAQHLAAEVLKLKSRGEFF
NT seq 1728 nt   +upstreamnt  +downstreamnt
atgcagtcgaggtgttaccatcaacccgctggcctgggtcaagaagggcctgacctccgt
gacctgcagatgaaggtggacttctttcgtaagctgggttactcttcacaagaggtgaag
gcggccctgaggaagctcggcctgggaacggacaccaacgcggtgctgggggagctggtg
cgttcaggggcgaaggccatgccctcctctagctctgacagcgatgatggtgggttcagt
ttgccccatcggggaggaggctcacctaggggacaagcttcagcgctggaggacacaact
gaacccgaaagtgacctgaagcctattgttatagatggcagcaacgtggccatgagtcat
gggaacaaggaagtgttttcctgccgcgggattgagttggcggttaattacttccttgac
cgaggacacagaaatatcactgtgtttgtgccttcctggagaaaagagcagcccaggcct
gatgtacctatttcagatcagcatattttggaagagctggaaaggaagaagattcttgtg
tttacaccttcgagaagggtcggaggaaagcgtgtggtctgctatgacgatcgctttatt
gtcaaattggctcatgacctagatggcattatagtgtccaacgacacatatcgtgacctg
caaagtgaacgtccggagtggaaacgttgcattgaggagagattgcttatgtactccttt
gttaatgacaagttcatgccacccgatgaccctcttggccgtcatggacccaatttagat
aattttcttaggaaaaaagcaatgttgcttgaccagaagcgacaactctgcccatatgga
aaaaagtgcacatatgggatcaagtgcaagttctaccacccagagcgcacaaaccagtca
cagcgttctctagctgatgagcttcgagagaatgccagactgtctggttcaaaagaggac
agcagagtaactgggccactaagaggaatgtacccaagaaatgaccctggttttggttcc
tgctcaccctccttggagcaagaactagaacaaaaactcagcttggatcccaagagctct
gagaggagggatgtcatgcctcagtactgggataacattttgtccacaaaaaaaccctta
aaaacagccacagtgggacaacgcagtgcttcttacacaacaaacccttcgtccattttc
agttctgactcaggacttggatcctacgaaagccagttctcagagccatctcagagcacc
gatgagttacatagcatgagatccggtcatccattgatgtctggtaaccctggcctacct
gcaggtggccagcggtactatgacaacatgaatcctttatccaactatcagcctaactat
ggtgcctacagctccctacctatgcccaatcatgtccaacgttacagtcttcctgcttac
ggtgcctggtcttaccctttcttcttaccgcaggcgaccagtttacccgaacctttaccc
tgtcctagctctcacagatctcccaatggctatggaagccagcagcactcagccatgcca
cagtctaacgctttccaggaagaaagagaggaggtcaggaagaagctccatgcgattttt
aacccgcatcatgtaaacaaagttatggaaatgttcccacaactgaaagatgcgcagcac
ctcgctgcagaggttctcaaactcaagtcgaggggagagttcttctga

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