Garra rufa (doctor fish): 141342636
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Entry
141342636 CDS
T11039
Symbol
rnf115a
Name
(RefSeq) E3 ubiquitin-protein ligase RNF115
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
grf Garra rufa (doctor fish)
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
grf04131
]
141342636 (rnf115a)
04121 Ubiquitin system [BR:
grf04121
]
141342636 (rnf115a)
Enzymes [BR:
grf01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
141342636 (rnf115a)
Membrane trafficking [BR:
grf04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
141342636 (rnf115a)
Ubiquitin system [BR:
grf04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
141342636 (rnf115a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-C3HC4_2
zf-RING_11
zf-RING_UBOX
zf-rbx1
zf-C3HC4
Zn_ribbon_19
zf-RING_5
zf-ANAPC11
zf-Nse
zf-RING_16
zf-C3HC4_3
C1_2
zf-RING-like
zf-RING_6
HypA
Motif
Other DBs
NCBI-GeneID:
141342636
NCBI-ProteinID:
XP_073703233
LinkDB
All DBs
Position
9:complement(31591162..31603064)
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AA seq
310 aa
AA seq
DB search
MAEAAAVPPHRFFCHCCKGEVSPKLPEYICPRCDSGFIEEVTEDSSLLDSSSNSLDDTAS
QFAELWQLLFVERPFSLDLDSPDSERVPGGGSGSGSLGTGPFGGSVPGGLGGSLGGPLGG
GEHWGPGRPPRLHTQRRYRSRGSSRPDRSPAVEGIVQQFLAGLFANSGVPGSPPLSWTGM
LHSNPGDYAWGQGGLDAVITQLLGQFENTGPPPAEKEKISSLPTVIITQEHTDCNMECPV
CKEDYTIGEPVRQLPCNHIFHSDCIVPWLELHDTCPVCRKSLNGDDSSTQSSSEPSSLNT
DPRTPERWSF
NT seq
933 nt
NT seq
+upstream
nt +downstream
nt
atggcggaggctgcggcggtccctccgcatcgcttcttctgtcactgttgtaagggtgaa
gtgagccccaaattaccggaatatatctgtcctagatgtgactcgggctttatcgaagag
gtgacagaagactccagtcttctggacagtagttcaaatagccttgatgacacagcttca
cagtttgccgagctatggcagctgttgttcgtggagaggccgttcagtttggatttagac
agtcctgattctgagcgggtccctggagggggcagtgggtctgggagtctcggaacaggg
ccgttcggcggttctgtcccaggtgggcttggtgggtccttgggtggccctctaggggga
ggagagcattggggtcctggtcgtcctccacgcctgcacactcagaggaggtaccgatcc
agaggaagcagtcgaccggatcgctctcccgctgttgagggaatagtacagcagtttctc
gcaggcctttttgccaattcaggagtacctggctctcctccactgtcatggacgggcatg
ctgcactcaaaccctggggactatgcctggggacaggggggtctggatgcagtcatcaca
cagttattgggtcagtttgagaacacaggtcctcctcctgctgagaaagagaaaatttcc
tccctccccactgttatcatcactcaggaacacactgactgcaatatggagtgccctgta
tgtaaggaagactacacgattggcgagccggtcaggcagctgccctgtaaccacatcttc
catagtgactgcatcgtgccctggcttgaactgcacgacacgtgtcctgtgtgcaggaag
agcctgaatggggatgacagcagcactcagtcctcatcagagccttcctccctaaacact
gatcctcgcacaccggagagatggtccttctga
DBGET
integrated database retrieval system
