Garra rufa (doctor fish): 141342693
Help
Entry
141342693 CDS
T11039
Symbol
nop2
Name
(RefSeq) 28S rRNA (cytosine(4447)-C(5))-methyltransferase
KO
K14835
25S rRNA (cytosine2870-C5)-methyltransferase [EC:
2.1.1.310
]
Organism
grf Garra rufa (doctor fish)
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
grf03009
]
141342693 (nop2)
Enzymes [BR:
grf01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.310 25S rRNA (cytosine2870-C5)-methyltransferase
141342693 (nop2)
Ribosome biogenesis [BR:
grf03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
141342693 (nop2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Methyltr_RsmB-F
RsmF-B_ferredox
Methyltr_RsmF_N
Methyltransf_31
PCMT
FtsJ
Motif
Other DBs
NCBI-GeneID:
141342693
NCBI-ProteinID:
XP_073703296
LinkDB
All DBs
Position
9:37595624..37606465
Genome browser
AA seq
731 aa
AA seq
DB search
MGRKLDPTKVKKGPGRKARKQKGAETELAKFLVDDDGPKKLSSRAKKRAIKRAQATKEHK
QEQKQAEKPKKGFSDENNKWLKPAQRKRKIEQSEEEEDSDSQWEEEEDYDDKEGIDQKQM
LEEDDDDDEDMVDDYGAEEEDEQDSDGEELLPIEKAAKKQKKQPSMKPESDDDDEDEDDD
DDDEEAKGNLDEDDDDEEEEDTVQANIDETEKFKLPGAADRAKEGLLLMDLQTIHQRIKD
NVDVLSHFTEKREVGKERSEYLSLLRSDLCTYYSYNEFLIGKLMDLFPLSELVDFLEANE
IQRPVTIRTNTLKSRRRDLAQALINRGVNLDPLGKWSKVGLVIYDSSVPIGATPEYLAGQ
YMLQGASSFLPVMALSPQEGESVLDMSAAPGGKTTYMAQLMRNTGMIVANDASADRLKSV
VGNIHRLGVTNAVICNYDGRQFPKVMGGFDRVLLDAPCSGTGVISKDPGVKTSKDEADIL
RSAHLQKELILSAIDSVNADSQSGGYLVYCTCSIMVEENEWVVDYALKKRNVKLVPTGLD
FGKEGFTRFKERRFHSSLKLSRRFYPHSHNMDGFFVAKLKKLSNTIPTAPKETDEVESTN
METAASSEQIRKPESKQKKPASTPVKSNMGTKQKLKQKKTESPIITKKSDGPKKAKIARL
DGEASKKSGKPDKKQKAKDLNGDSTKEAGKEKKKGSPFEKKNKMKKKLLNKNNRMGKNRF
SKLKNMLGKTK
NT seq
2196 nt
NT seq
+upstream
nt +downstream
nt
atggggaggaagttggatcccaccaaggtgaaaaaaggacctggacgtaaggccagaaaa
cagaagggagccgaaacagagctggccaagtttttggttgatgatgatgggccaaaaaaa
ctttcaagcagagcgaagaaacgagctataaaaagagctcaagccaccaaagaacacaaa
caagaacaaaaacaagcggaaaagcctaaaaagggattctcagatgagaataataaatgg
ctaaaaccagcacagaggaagcgaaagattgaacaatctgaggaagaagaggatagcgac
agccagtgggaagaagaagaagattatgacgacaaagagggcattgatcaaaagcaaatg
ttggaggaggatgatgatgatgatgaggatatggttgatgactatggtgctgaagaagag
gatgaacaagacagtgatggagaagagcttctgccaattgagaaagctgcaaaaaaacag
aaaaaacaaccaagcatgaaaccagagagtgatgatgatgacgaggatgaagatgatgac
gacgatgatgaagaggcaaagggtaatttagatgaagatgatgatgatgaggaggaagaa
gatactgtacaggcaaatattgacgagaccgaaaaattcaaactccctggtgcagcagat
agagccaaggagggtctattactgatggacctacagaccatccatcagaggatcaaagat
aatgtggatgtgctgtctcacttcactgagaagagagaagtgggcaaggagaggtcggag
tatctctctctgctgcgttctgacctctgcacctactacagctacaacgagttccttatt
ggcaaactcatggaccttttccctctctctgagctggttgattttcttgaggccaatgaa
atccaaaggccagtcaccatcagaaccaacaccctgaaatccaggaggagagacttggct
caggctctgattaacagaggggtgaatctggatccattggggaagtggtccaaagtgggg
ctggtcatctacgactcttctgttcccataggagcaactccagaatatttggcaggccag
tacatgttgcaaggtgcatcatcgtttctgcctgtaatggcgctttctccacaggagggg
gagtcagtgctagacatgagtgccgctccaggaggcaagaccacatatatggctcagcta
atgaggaacacaggcatgattgtggctaatgatgcaagtgcagacagactgaagagcgtg
gtgggaaatatccatcgtcttggtgtcactaatgctgtcatctgcaactatgatggcaga
cagttcccaaaggtgatgggaggtttcgatagagtgcttttagatgctccttgctcgggt
acaggagttatctctaaagatccaggagtaaaaaccagcaaggatgaggctgatattctt
cgctcagctcacctgcagaaggagcttatcttgtctgctattgactctgtcaatgctgat
tctcaaagtggcggataccttgtttactgcacatgctccattatggtggaggaaaatgag
tgggtggtggactacgctttgaagaagagaaatgtaaagctagtccccactggactagac
tttggcaaagaaggattcaccagattcaaagaaagacgtttccattcctctctcaaactg
tctcggcgattctaccctcattcccacaacatggatggattttttgtggctaagctaaag
aagctgtctaacaccattcccacagcaccaaaagaaacagatgaagtagaatctacaaac
atggagactgcagcctcttcggagcagatccgaaaaccagagtccaagcaaaagaagccc
gcttcaactccagtgaaaagcaacatgggcacgaagcagaaattaaaacagaagaaaacg
gagtcgcccatcatcacaaagaaatctgatggtcccaaaaaggccaaaattgctaggttg
gatggtgaagcatccaaaaagagtgggaaacctgacaaaaaacagaaggcaaaggacctg
aatggagattcaacaaaagaggcagggaaggagaagaaaaaggggagtccatttgagaag
aaaaacaaaatgaaaaagaagttgttgaataagaataacagaatggggaaaaacaggttt
agtaagttaaaaaacatgcttgggaaaacaaagtaa
DBGET
integrated database retrieval system
