Garra rufa (doctor fish): 141342787
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Entry
141342787 CDS
T11039
Symbol
lingo4b
Name
(RefSeq) leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 4b
KO
K23533
leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein
Organism
grf Garra rufa (doctor fish)
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
grf04131
]
141342787 (lingo4b)
Membrane trafficking [BR:
grf04131
]
Endocytosis
Lipid raft mediated endocytosis
RhoA-dependent endocytosis
141342787 (lingo4b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
I-set
LRR_1
Ig_3
ig
LRR_Zer-1
V-set
Ig_2
LRR_EndoS
LRRNT
LRR_6
C2-set_2
C2-set_3
Ig_C17orf99
Big_6
Motif
Other DBs
NCBI-GeneID:
141342787
NCBI-ProteinID:
XP_073703424
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Position
9:complement(21572788..21599100)
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AA seq
604 aa
AA seq
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MFMDLCGQRGAWTVLLLWCINLSAADLTCPQKCTCYLDTLEVNCSSRHLTGVPEGFPSNA
KRLDLSRNQLKTLARRQFSSLSKLEDLDLSENIISMIEVETFQGLKNLRYLRIKNNRLKI
LPVGVFSGLSNLRRLDISENEILVFLDYTFKDMINLQQLDAGENDLVFISQRAFVGLQAL
KELNVDRSNLTSIPTEALSQLQSLIKLRLRKLTISVLPNNAFRRLHQLRILQILHWPSLE
TLNSNSLVGLNLTTLILSNCNLSAVPYAALRHLTYLQYLDLSYNPITSIQGNLLGDLLRL
QELHLVGGSLFRIEPGAFRGLVHFRLLNVSSNRLSTLEESVFHSVGNLQTLRLDRNPLAC
DCRLLWVMRRRRRLDFDGRQPTCSPLNQHKKAFRDFSEADLPVIFTCRQAQIVNRQQQDV
SVVEGMSVRFDCKADGYPSPSITWLSAQQTALSSVGRVRVLANGSLEVRYTQVQDSGTYL
CTAANAAGNDSISVSLQVDGLLQNRTVSYFSDDGWMETSLPPSTNSSARVSSPYPFDAKT
LIIATTMGFLSFLSSVAICFVFMFFWSQSKGQIKHTATIDFVPRSSMGGGGDGGDTGRFT
MKLI
NT seq
1815 nt
NT seq
+upstream
nt +downstream
nt
atgttcatggatctgtgtggccagcggggcgcatggacagtcctgctgttgtggtgcata
aacctatcagctgctgacctcacctgcccgcagaaatgcacttgttaccttgacactttg
gaggtaaattgctcctcaaggcacctgacgggtgttcctgaggggttcccaagcaatgcc
aaacgcttagacctttccaggaaccagctgaaaacgctggccaggcgtcagttctccagc
ctgtcaaagctagaggacctggacctgagtgaaaacataatctctatgattgaggtggaa
acatttcaggggctaaagaacctgcgatacttaaggattaagaacaaccgtctcaagatc
ctcccggttggcgtcttctccggcctctccaaccttcgacgtttggatatcagcgagaat
gagatcctggtttttctggattacacatttaaggacatgattaatttacagcagcttgat
gcaggggaaaacgacctggtgtttatctcgcaacgggcatttgttggccttcaggcgctg
aaggagttaaacgtggaccgcagcaacttgacctccatcccgactgaggctttgtcgcaa
cttcagagcttgatcaagctgcgcctgcgcaagctgaccataagtgtgctgcccaataac
gcctttcgccgactgcaccagctgcgcatcttgcagatcctccactggccttctctcgag
acgctaaatagcaacagcttggttggcctgaaccttactaccttaattttaagcaactgc
aacctcagcgccgtaccttatgctgcgctgcgtcatctcacctacctgcagtacctggac
ttgtcctacaaccccatcacttccatacagggcaaccttcttggggatcttctgcggctc
caagagttgcacctggtaggtgggagcctgtttcgtattgagccaggtgcctttaggggt
ctggtccactttcgtctgctcaatgtgtcttcaaatcgtctgtccacattggaagaaagc
gtcttccactctgtagggaacttgcagaccctgaggctagacagaaacccgttggcttgc
gactgcaggctactctgggtcatgcgacggcggcggcggctggatttcgatggccgccaa
cccacctgttcgcctctaaatcagcacaagaaggcatttcgtgacttttcagaagctgat
cttccggtaatatttacttgcagacaagcgcagattgtaaaccgtcagcagcaggatgtg
agtgtggtggaggggatgagtgtacggtttgactgcaaagcagacggctatccgtcacct
tctattacttggctctcagcccagcagactgcacttagctctgtcgggagagtacgagtg
cttgcaaatgggagcttggaggtgcgttacacccaagtacaggacagtggaacgtatcta
tgtactgcagctaatgcagcaggtaacgacagtatctccgtgagtctgcaagtggatggg
cttctgcaaaaccgcaccgtgtcgtatttctcagacgatggatggatggaaacttcatta
cctccttctaccaactcctccgcacgggtgtcgagtccttacccgttcgatgcgaaaacc
ctcatcattgctaccaccatgggatttctgtctttcctcagctctgtggcgatctgtttt
gtgttcatgttcttctggagtcagagcaaaggtcagataaaacacactgccactatagac
tttgtgccacgatcatccatgggtggaggtggagatggtggggacactgggagattcaca
atgaagcttatttga
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