KEGG   Garra rufa (doctor fish): 141342803
Entry
141342803         CDS       T11039                                 
Symbol
pik3r4
Name
(RefSeq) phosphoinositide 3-kinase regulatory subunit 4 isoform X1
  KO
K08333  phosphoinositide-3-kinase, regulatory subunit 4 [EC:2.7.11.1]
Organism
grf  Garra rufa (doctor fish)
Pathway
grf04136  Autophagy - other
grf04140  Autophagy - animal
grf04371  Apelin signaling pathway
Brite
KEGG Orthology (KO) [BR:grf00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04371 Apelin signaling pathway
    141342803 (pik3r4)
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    141342803 (pik3r4)
   04136 Autophagy - other
    141342803 (pik3r4)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01001 Protein kinases [BR:grf01001]
    141342803 (pik3r4)
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:grf04131]
    141342803 (pik3r4)
Enzymes [BR:grf01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.11  Protein-serine/threonine kinases
    2.7.11.1  non-specific serine/threonine protein kinase
     141342803 (pik3r4)
Protein kinases [BR:grf01001]
 Serine/threonine kinases: Other
  VPS15 family
   141342803 (pik3r4)
Membrane trafficking [BR:grf04131]
 Endocytosis
  Rab GTPases and associated proteins
   Rab associated proteins
    141342803 (pik3r4)
 Autophagy
  Autophagosome formation proteins
   PI3K complex
    141342803 (pik3r4)
SSDB
Motif
Pfam: VPS15-like_hel Pkinase WD40 WD40_CDC20-Fz WD40_WDHD1_1st WD40_Prp19 WDR55 Beta-prop_EML_2 HEAT Beta-prop_RIG_2nd Beta-prop_TEP1_2nd PK_Tyr_Ser-Thr Beta-prop_TEP1_C Beta-prop_HPS5 Beta-prop_IFT140_1st NBCH_WD40 Beta-prop_EIPR1 Beta-prop_Vps41 Beta-prop_CAF1B_HIR1 EIF3I WD40_MABP1-WDR62_2nd Beta-prop_IFT140_2nd Beta-prop_WDR19_1st PEP5_VPS11_N WDR90_beta-prop_4th HEAT_EF3_N Beta-prop_WDR75_1st Tti2 TFIIIC_delta APH
Other DBs
NCBI-GeneID: 141342803
NCBI-ProteinID: XP_073703455
LinkDB
Position
9:15970853..15985885
AA seq 1388 aa
MGNQLAGIAPSQILSVDSYFSDIHDYEYDKSLGSTRFFKVARAKHREGLVVVKVFAIQDP
SLPLTSYKQELEELKIRLHSCQNCLPFQKATLTEKAAILFRQYVRDNLYDRISTRPFLNN
VEKKWIAFQLLNAVDQAHKSGVRHGDIKTENVMVTSWNWVLLTDFASFKPTYLPEDNPAD
FNYFFDTSRRRTCYIAPERFVDGSMFATESDQTTPLVDLSSNSQRTRGELKQPMDIFSAG
CVIAELFTEGVPLFDLSQLLAYRKGHFQTEQVLMKIEDRGIRELVAQMVQREPEKRLTAE
EYLKQQRGKAFPEIFYTFLQPYMAQFAKETFQSADERVLVIRKNLENILNNLCSAGQTGK
TEKQEKASQELSSSKEQGLVVLVSVITSCLQTLRFCDSKLAALELILHLAGRLNVEIVLD
RITPYLLHFCNDSMPRVRAEAVRTLTKVLALVKEVPRNDVNIYPEYILPGIAHLAQDEAT
IVRLAYAENIAHLAETALRFLELVQENNLSSEQDVSGEDTEETLHPNENYDSELQALHEM
VQQKVVTLLSDPENIVKQTLMENGITRLCVFFGRQKANDVLLSHMITFLNDKNDWHLRGA
FFDSIVGVAAYVGWQSSSILKPLLQQGLSDAEEFVIYKALNALTCMCQLGLLQKPHIYEF
VSDIAPFLCHPNLWIRYGAVGFITVVAQHLNIADVYCKLMPHLNPFITQPIIQIDKEIVL
LSVLKEPVSRSIFDYALRSKDIGSLFRHLLLRQKKRNGSIPECPVPEDPAIAQLLKKLLS
QGMTEAEEDKLLSLKDFMLKSNKAKANIIDQSHLSDGAHSGVIELGTLGITGRQVDLIKP
KQESEDKRDFIPSASARKHTKQDSNLNEEWKSMFGSLDPPSSAQTPSTVPNVLVPSGGGE
PNGTLAGERLRSESSSQPLNLPHVPSSAQIPEGGAMQPRKTTALPTIQVIQSVTGASTYQ
RRITTCKAELQQLVQQKREQCNAERMAKQMMESAEWESRPPLPGWHPKGLLVAHLHEHKS
AVNRIRVSDEHSIFATCSNDGTVKIWDSQKMEGKTTTTRSVLTYSRIGGHVKTLTFCQGS
HYLAVASDNGSIQLLAVEANKPPKSPKVQPCQTRFLDPKDEGCVVDVHHFNSGAQTVLAY
ATVNGFLVGWDLRSNSNAWTLRHDLRLGLITSFAVDMHQCWLCVGTSNGTMACWDMRFQL
PISSHSHPARARIRRLLMHPLYQSSVIAAVQGNNEVSMWDMETGDRKFTLWASSAPPLSE
MQPSPHSIHGIYCSPADGNPLLLTAGSDMRIRFWDLAYPERSYIVAGGANDSLHCPSVFY
NRKIIEGTEVVQEIHSKQKSGSTEDTPRRGPESLPVGHHDIITDIATFQTTQGFIVTSSR
DGIVKVWK
NT seq 4167 nt   +upstreamnt  +downstreamnt
atggggaaccagctggctggaattgctccatcacagattctttcagtggacagttacttc
tctgacatccatgattatgaatatgacaagagtcttggcagtacacgctttttcaaagtg
gcccgggcaaaacatagagaaggattggttgtggttaaggtctttgcgatccaggatccc
tctctccccctgaccagctacaaacaagaactggaggagctgaaaatcagactgcactct
tgtcagaactgtttgccttttcaaaaagcgacacttactgagaaagcagccatactattt
cggcagtatgttcgggataacttgtatgaccgtatcagtacccgtccgttccttaacaac
gtggagaagaagtggatcgccttccagcttcttaatgctgtggaccaggcccataaatct
ggtgtgcgtcatggtgacattaaaactgagaatgttatggtgacaagctggaattgggtg
ctgcttacagattttgctagttttaaacctacttacttacctgaagacaaccctgcagat
ttcaactacttctttgacacgtccaggaggagaacatgctatattgcaccagagaggttt
gtggatggcagcatgtttgccacagaaagtgaccagacaacaccgcttgtggatctctcc
agcaatagccagaggaccaggggagagctcaaacagcccatggacatcttctcagctggt
tgtgtgattgcagagttgtttactgagggtgtcccactcttcgatctctcacagctgctg
gcttaccgcaaaggacatttccaaaccgaacaagtgctgatgaaaattgaggatcgcggt
attagagaactggtggcacaaatggtgcagcgagaaccggaaaagcgtctgacagctgaa
gaatatctaaaacagcagcgaggcaaagctttcccagaaatcttctataccttccttcag
ccttacatggctcagtttgccaaggaaaccttccagtctgcagatgagagggtgttggtg
attcgtaagaacctggagaacatcctcaataacttgtgcagtgctggccagacagggaag
actgaaaaacaggagaaggcatctcaggagcttagttcatccaaggagcaagggctggtg
gtgctggtgtcagtgatcacatcctgtctgcagacactacgtttctgcgactccaagctg
gcagccctggagctgattcttcatctggctggccggctgaatgtggagatagtgctggac
aggattacaccttacttactgcacttctgcaatgactctatgccgcgcgtcagggctgag
gccgttcgcacgctgactaaagtgctggcgctggtcaaggaggttcctcgcaatgatgtc
aacatctacccagaatacattttacctgggattgcccacttggcccaagatgaagccaca
attgtcaggcttgcttatgcagagaacatagcacacttggctgagacagcgcttcgtttt
ctggagctggtgcaggaaaataatttgagctctgaacaagacgtcagtggagaggacaca
gaagaaactcttcaccccaatgaaaactatgattcagagctgcaggccttgcatgagatg
gttcagcagaaggtggtgactttactgagcgaccctgagaacattgtcaaacagacgctg
atggaaaacggcatcacgcgcctctgcgtgttcttcggcaggcagaaagccaacgatgtc
cttctctcccacatgatcaccttcctcaatgacaagaatgactggcacctccgtggagct
ttctttgacagcatagttggtgtagcagcatatgtgggctggcagagttcctccatcctg
aagcctcttctgcagcaaggcctgagtgacgctgaggagtttgtcatttataaagctctc
aatgctctcacttgcatgtgtcagctggggctgctgcagaaacctcacatttatgagttt
gtcagtgatattgctcctttcttgtgtcaccccaatctgtggatccgctatggagccgtg
ggtttcatcaccgttgttgctcagcacctaaacatcgctgacgtctactgcaaactcatg
cctcatctcaaccctttcatcacacagcctattatacagattgataaggagattgtgttg
ctcagtgtgctgaaggagcctgtaagtcgctccatctttgactatgcgctgcgttcaaaa
gacatcggaagccttttcagacacctgttactccgccaaaagaagcgcaacggctccatc
ccagaatgccctgttcctgaggatcccgcaattgcccagctgcttaagaaacttctttca
caggggatgacggaagctgaggaggacaagctcttatcgctgaaagacttcatgctcaag
tccaacaaggccaaagccaacatcatagaccagagccacctgagtgatggagcccacagc
ggagtcattgaactgggaacactgggcatcactggccgacaggtggacctcatcaagccc
aagcaggagtctgaagacaagagagacttcatcccttctgcctctgctcgcaaacacacg
aaacaggactccaacttgaacgaagagtggaagagcatgtttggttctctggaccctccc
agctcggcgcagacgccctcgacggtacctaatgttctagttccgagcggtggtggggag
cccaacggaactctggccggagagcgcctgcgatctgagagttcctcacagcctcttaac
ctccctcatgttccatcctcagcccagattcctgaaggtggagccatgcagcccaggaaa
accacagcacttcctactattcaagtaatacagtctgtaaccggagcgtccacgtaccag
agacgcatcacaacatgcaaggccgagctacagcagctggtgcagcagaaaagagagcaa
tgcaatgcagagcgcatggccaaacagatgatggagagcgccgagtgggagagcaggcct
ccactgccaggatggcatccaaaaggtcttttagtggctcatctccatgagcacaaatct
gctgtgaaccgaatcagagtctctgatgagcactcaatctttgctacatgctctaatgat
ggaactgtgaagatctgggacagccagaaaatggagggcaagacgaccaccacaaggtcg
gtgctgacatattctcggattggaggccatgtgaaaacactgactttttgtcaggggtcg
cattaccttgctgttgcatcagataatggttccatccagcttcttgcagttgaggcaaac
aagccgcccaaatcacccaaagtccagccctgtcaaaccaggttcctggatccaaaggat
gagggctgtgtggtggatgtacatcactttaactcgggggcgcagacggttctggcctac
gccactgtgaatggctttttggtgggttgggacctccgcagcaatagcaatgcctggacc
ctccgccatgacctgcgcctaggcctcatcacatcctttgctgtggacatgcaccagtgt
tggctgtgtgtgggcacaagtaatggcacaatggcatgctgggatatgcggtttcagtta
ccaatttccagccactcccacccagcccgagcaagaatcagacgcctactgatgcatcca
ctctaccagtcctctgtcattgcagctgtccaaggtaacaatgaggtatccatgtgggat
atggagactggagacaggaagttcaccctctgggccagttctgcccctccgctttcagag
atgcagccctctcctcacagtattcatgggatatactgcagccctgctgatggaaaccct
cttctacttacagctggatctgacatgagaatcaggttttgggatttggcctaccctgag
aggtcatacatcgtcgcaggtggtgcaaacgactctcttcactgcccttctgtgttctac
aaccgcaagatcattgaaggaacagaagtagtacaggagatccacagtaagcaaaagagc
ggatccactgaagacacgcctcgccgtggaccagaatcccttcctgtgggtcaccacgac
attattactgatattgcgactttccaaaccacccagggctttatagtcacctcctctaga
gatggcattgtcaaagtctggaagtga

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