Garra rufa (doctor fish): 141342826
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Entry
141342826 CDS
T11039
Symbol
zeb1a
Name
(RefSeq) zinc finger E-box-binding homeobox 1 isoform X1
KO
K09299
zinc finger homeobox protein 1
Organism
grf Garra rufa (doctor fish)
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
grf03000
]
141342826 (zeb1a)
Transcription factors [BR:
grf03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ZF
141342826 (zeb1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
zf-C2H2_jaz
zf-Di19
Homeodomain
zf-met
zf-C2H2_15
Motif
Other DBs
NCBI-GeneID:
141342826
NCBI-ProteinID:
XP_073703482
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All DBs
Position
9:51404916..51435099
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AA seq
1207 aa
AA seq
DB search
MADGPRCQRRKQTQPRRNNVRSISSVPEATSDSDDEDKLHIVEEDSIADDPNQKSSVFQL
KAARQLSETCTQDDGSLGPDALIQEIRVKEECVTDEEDGADDEVAGEEKQTETEHYSDAP
EEHQSTPERGVHDENGTPDAFSQLHTCPHCSRGYKRHTSLKEHIKLRHEKSEDNYCCSLC
SYTFTYRTQLVRHMTAHRHVREQRSISQSGGNRKFKCTECSKAFKYKHHLKEHLRIHSGE
KPYECSNCRKRFSHSGSYSSHISSKKCASVTPAVNGLPRTPGVKPALTVSRSTHILLREK
VDITNKPLQEQLPLKQIKQEPVEQQPKPASTTPTIAATTTNGVVTPQGIVQTLVLPTVGL
VQPISINLSDLQNALNAAMDGNVIRQVLTSTNANGTSAKIVGQVPAQSQAQAVVLQPQQA
QPQVISAISLPVVGQDGNAKIIINYNPQLESQLKALKVNPTQPTATQTTIAQAKPTQPNV
VQLQSVQSNSTETQTSGTPKPTQVNIIKPVQTGNLSKPPSIIKITPAQAARLVQARAAQP
KLTQQTLLLVRRADGTQSLVVRQIPVANSATQNSEIKSAPDKTTTTSPAEKNTTETTDNT
GSLEDKSEKQNLTTPPEIKIKTEPASPSKIEQSENDKEMQTDENQEGGKQTTATTEQVEH
SGTVHSGVACGDNFHNYATCLLCDSSPSKRKPLDCQDSDAKGSATTISLSSLLDKDKSGA
AERLLPLLKAYSQNPEPSEEQLSQVAKTVKLPLEAVSKWYQKMRSKKILLQAAGNQKNNQ
EKTTPSAAPEGINSTQAPCTPTPPPDGTSADTQNGSAASPASPPASVSTDDLVIVKTEDV
EEELQCEPLDLSLPKSSSAQASTTTKLPVSTQKEPLNLTCLKKQTFPGNTIYVTQAGSGP
LNILTTPLPTLVAITDTGGVPCIGTAISGNKRTILIPQLTYTYTTNPTVKMPDNALTETK
GTVILNNCPTVADTASDCVSEDQNDEDSPLMKKKRKSVGGLYACDLCDKIFQKSSSLLRH
KYEHTGKRPHECAICNKAFKHKHHLIEHTRLHSGEKPYQCDKCGKRFSHSGSYSQHMNHR
YSYCKRDTHELPEQVSTSTPPSQLDSDERESDGEEEEDLTALDMSDIRVVQVGEDYEDEE
EESGGEEEQDREHEEQETEEGGMVMEVELGDTDTLEEETVETEDTMETEEDAVLTNIEEN
TEMATED
NT seq
3624 nt
NT seq
+upstream
nt +downstream
nt
atggcggatggccccaggtgccagcgcagaaaacagacacagccacgacgcaacaacgtg
aggagtattagcagtgtgccggaggcgacctcagattcagatgatgaagacaaactgcac
attgtagaggaggacagtattgctgacgatcccaaccaaaagtcctcagtattccagctc
aaagcagcacggcagctttctgaaacatgcacacaggatgatggcagcctggggccagat
gctttaatacaagaaataagggtcaaagaggagtgtgtcactgatgaggaagatggtgct
gatgatgaagtggccggtgaggagaagcagacggaaacagagcattactcagacgcccca
gaggagcatcagagtacgccagagcgaggggtccatgatgagaacggtactcctgacgca
ttctcgcagctgcacacctgtccgcactgttcccgtggttacaaacgtcacacgtcgctg
aaggagcacattaaactacgccatgaaaagagcgaggacaactactgctgttccctctgt
agctacaccttcacctaccgcacacagctcgtccgtcacatgaccgcacacagacacgtc
cgagagcagcggagtatttctcagtcgggcggaaaccgaaagttcaagtgtacagaatgc
tccaaggccttcaaatacaaacatcacctgaaggagcacctacgcatacacagcggtgag
aagccatatgagtgctctaattgtcggaagcgtttttcacactcggggtcctacagctct
cacatcagcagtaagaagtgtgcgagcgtgacccctgcggttaacggcctgcctcgcaca
cctggagtgaaaccggctcttacagtttctcgctctacacacatccttctaagggagaag
gtggacattaccaataagcctctgcaagagcagctccctctgaaacagatcaaacaggag
cctgtcgaacagcaacccaaacctgcgtcaacaacgccaacgatagctgccaccactacc
aatggagtcgtgactcctcaaggcatcgtccaaacattggtcttgcccaccgtggggctt
gtccagccaatcagtatcaacctaagtgacctacaaaatgcgctgaatgcagcgatggat
ggtaatgtcatcaggcaggtgttgaccagcaccaatgcaaatggaaccagcgctaaaatc
gtaggtcaagtgccggcgcagtcgcaggcgcaagctgttgtgttacagcctcagcaggcg
cagccgcaggtgatctccgcaatctctttgccagttgtgggacaagatggaaatgccaaa
attatcatcaactacaacccccagctagaatcacaactcaaggcattgaaagtgaaccca
acgcaacccacagcgacacaaaccactatagcgcaggcaaaacctacacagccaaacgtg
gtacagcttcagtcggtgcagtccaactcgactgaaacccaaacatcagggacaccgaaa
cctacacaggtaaacatcattaaaccagtccaaaccggaaacctcagcaaaccgccgtcg
atcattaagataacgcctgcgcaggccgccaggttggttcaagctcgggcggcacaacca
aagctcacccagcaaacattattgctggtgagaagagcagatgggactcagagcctcgtt
gttcgacaaatacctgtcgccaattccgctacgcagaactctgagataaaatcagccccg
gataagactacaaccacttctccagcagagaaaaacacaactgagacaactgataataca
ggttcgctggaggacaaaagtgagaaacaaaacctcaccacccctccagaaatcaaaatc
aaaactgaaccggcctctccgtccaagatcgagcagagtgaaaatgacaaagagatgcag
accgatgaaaatcaagaaggagggaaacaaacaacagcgacaactgagcaggtcgaacac
tctggaacggttcacagcggcgtcgcctgtggagataacttccataactatgcgacgtgt
ctgctttgcgacagctctccgagcaaacgcaagcctttggactgtcaagatagtgatgcc
aaagggtcagccacaactatttctctctcctctttacttgataaggataagagtggagca
gcagaacgcctccttcctcttctcaaggcctacagtcagaatccagaacctagcgaggag
cagctgtctcaggtggccaagacagtgaagttacctttagaggcggtcagcaagtggtat
cagaagatgcgctccaagaagatattgctccaggctgcaggcaaccagaaaaacaatcaa
gagaaaactacaccatctgctgcacctgaaggaattaactccactcaagccccctgcact
cccactccaccccctgatggcacctcggcagacacccaaaatggaagcgccgcttcaccc
gcctcccctccagccagcgtctccaccgatgacctcgtcatcgtcaagacagaagatgta
gaggaggagctgcagtgtgaaccactggatctctcgctccccaagtccagctccgctcaa
gccagcaccaccactaagctgccggtctctacccaaaaggaaccgctcaacctcacctgc
ctcaagaagcaaacgttcccaggcaacaccatctatgtgacgcaggccggctcgggtcca
ttaaacattttgacaacgccattgccaacgctggttgccataactgacacaggcggtgtt
ccatgcatcggcacggcaatatccggtaataaacgaaccatcctcatccctcagctcacc
tatacctacaccaccaaccccaccgtcaaaatgcccgacaatgccttgacagaaacaaag
gggacggtaatactcaacaactgtccgacggtggcggacacagcttcagactgcgtgtca
gaggaccagaatgatgaagattcaccactaatgaagaagaagaggaagtctgtcggtggc
ctgtacgcctgcgatctgtgtgacaaaatctttcagaagagcagctcactgctgcgacac
aaatatgaacacacaggcaagcgacctcatgagtgcgccatctgtaacaaggctttcaaa
cacaagcaccacctgatcgagcacacaagactacactccggagagaagccctaccagtgt
gacaagtgtggaaaacgcttctctcactcaggctcttattctcaacacatgaaccaccga
tactcctactgcaagagagacactcatgagctgccagagcaggtcagcacctccactcct
ccttctcagctcgactcggacgagagagagagcgacggagaggaggaagaggatttaacc
gctttagacatgagcgatatcagagtggtgcaagtgggagaggattacgaggatgaggag
gaggaaagcggcggagaggaggagcaggacagagaacacgaggagcaagagacagaggaa
ggaggaatggtgatggaagtagagctcggggatactgacactttagaggaggaaacggtg
gaaacggaggatactatggagacggaggaggatgcagttcttacaaatattgaagaaaac
acagaaatggcaaccgaggactga
DBGET
integrated database retrieval system
