Garra rufa (doctor fish): 141342840
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Entry
141342840 CDS
T11039
Symbol
preb
Name
(RefSeq) guanine nucleotide-exchange factor SEC12
KO
K14003
prolactin regulatory element-binding protein
Organism
grf Garra rufa (doctor fish)
Pathway
grf04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
141342840 (preb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
grf04131
]
141342840 (preb)
Membrane trafficking [BR:
grf04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
141342840 (preb)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
Beta-prop_WDR5
WD40_WDHD1_1st
Beta-prop_WDR3_1st
Beta-prop_EML_2
WD40_Prp19
Beta-prop_THOC3
WD40_CDC20-Fz
Beta-prop_WDR3_2nd
WDR55
WD40_MABP1-WDR62_2nd
Beta-prop_EML
PEP5_VPS11_N
EIF3I
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_1st
Beta-prop_WDR90_POC16_2nd
NBCH_WD40
Beta-prop_CAF1B_HIR1
WD40_Gbeta
VPS11_N
EutA
CrgA
Motif
Other DBs
NCBI-GeneID:
141342840
NCBI-ProteinID:
XP_073703504
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Position
9:complement(46201244..46214952)
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AA seq
426 aa
AA seq
DB search
MGKRRAPELYRAPFPLYTVKIDPKSGLIITAGGGGASKTGIKNGMHFLSLDLVGGVHSAT
LLHTHETDTRATMCMSLGGDVIAAGQDANCSLMRFSQHAAKQAKKPAAKDGAGDKGAARK
RGGKGQNGDGGGGGDVAQMKEDSPQIVVEDIGAVQADLSPQEPCVKCVRFSADLTLLLSG
GADGFVRVWEFPSLKEKFSFKAHEDELEDIDISPDKKHIVTVGRNFECSVWSGDQLAVGL
CWHENMPQIGEKMYRYKSCRFAKVEDQKDALRLYTVQIPHKRDRKPPPCYITKWDGRAFL
PLLTKPCGNEVISCLTVSDSGTFLGLGTVTGSVAIYIAFSLQKLYYIQESHGIVVTDLTF
LPDAPQSKAVKGNNEVALLSVAVDSRCQMHAVSNRSSFPLWLVLFFCGLMVVGVILLLQS
LFPGFI
NT seq
1281 nt
NT seq
+upstream
nt +downstream
nt
atgggtaaacgtagagcacctgagctgtacagagccccctttcctctctatactgtgaaa
atcgaccccaagagcggcctgatcatcacagctggaggaggcggcgcgtccaagaccggg
atcaagaatggaatgcatttcctgagtttagatctggtcggcggtgtgcacagcgccacc
ttgctgcacactcatgaaacggacacacgtgccaccatgtgcatgtctcttggtggagat
gtgatcgctgcgggacaggacgccaactgcagcttgatgaggttcagtcagcatgcggcc
aaacaggcaaagaaacctgcagccaaagatggggccggagataaaggtgcagccaggaag
agaggcgggaaaggccagaatggagatggaggaggaggaggagacgtggcccagatgaaa
gaggattctcctcagattgtggtggaggatattggagcggtgcaggccgacctcagccca
caggagccctgcgtgaagtgtgtgcgcttcagcgccgacctcacgcttctgctgagcggc
ggggccgacggtttcgtcagagtgtgggagttcccctctttgaaagagaagttcagcttt
aaagctcacgaggatgagctggaggatatagacatcagtcctgataagaagcacattgtg
acagtaggccgtaatttcgagtgcagcgtgtggagcggcgatcagctggccgtgggtttg
tgttggcatgaaaacatgcctcagatcggagagaagatgtatcgctacaagtcatgcagg
tttgcaaaggtagaggaccagaaagatgctttaagactctatacggtccaaatcccccac
aaacgggaccgaaaaccccctccatgctacatcaccaaatgggacggacgggctttcctg
ccgctgctcacgaagccttgtgggaatgaagttatatcttgtcttacagtgagtgactct
ggaacatttcttggtcttggaacggtgactggatccgtggccatctatatagcgttttcc
ctgcagaaattgtactacatccaggaatctcatgggattgtcgtcacagacctgacgttc
ctacctgatgctcctcaaagtaaagcagtgaaggggaataatgaagtggccctgttgagc
gtagccgtcgacagccgctgtcagatgcatgccgtgtctaaccggagctcattcccgctg
tggctagtcctgttcttctgtgggctgatggtggttggagtgattctgctcctgcagtct
ctcttccctggattcatttag
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