Garra rufa (doctor fish): 141342846
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Entry
141342846 CDS
T11039
Symbol
atxn1b
Name
(RefSeq) ataxin-1
KO
K23616
ataxin 1/1L
Organism
grf Garra rufa (doctor fish)
Pathway
grf04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
141342846 (atxn1b)
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Gene cluster
GFIT
Motif
Pfam:
ATXN-1_C
AXH
Motif
Other DBs
NCBI-GeneID:
141342846
NCBI-ProteinID:
XP_073703511
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Position
9:complement(29904027..29915549)
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AA seq
826 aa
AA seq
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MKSNQERCNECLPPKKREILALEEKQVLVSAAVSESQSGENLAWLASVATMASMAHIPNN
AGPSQSNSAEPDSPPPSNKALTVVTEYPPTTTSAGFSFSSNSSTYRGVFSGPTVLTANPA
VLSTSLSQTIGSVQYTQLPPNLQLIGPYTSYISSQIVPSTSSPTQPRRTPQEVLATTAVI
SQASSLDSQSHHVISSIPNVSHSQCIQVESAPLGLTVSSPSAQLPIQIHPHSAVLAPHAL
ALTPSQVVLHYTDGFIAKQPDSHPREMQNGTIGEIAVVKHSTAKGISSQPEGDQSHKQNH
NLGLQTQAQVLLPADYSSHDRTGLQTSLMLVSSSHLAANSNSELQSILGKDHSSLHLAER
GGICIGKPMSRVSALSSSDSQVSPASTISPHTLLQATHNTPQQELSTSLYSATQLPIIGY
ITSASGGPQQAVTGYQSNLPQHVVISGNPSLLIPVSATNINPTTAEPEVTRCSVIPSVAN
ASTALPQTFINTSPPAAAASVLPNGKDITVSDGGHASCVVPSPTQIQLPVLSASVVGSPV
PITPPASTSPHSSPSSPSAGLPPFFMKGSIIQLADGELKRVEDLRTEDFVQSAEVSGELK
IDSSTVERIECSRTPNAVIIQFSVGENKAQVCVEVLVEYPFFVFGQGWSSCCPDRTTQLL
ALSCAKLSVGDVCISLTLKSLKDSIQKKDLFSDSVTKHNHTLKPAKNNGPIEERPTQLDD
LKKGHKMTSGMENSAGTLVETSNPRNVLTLLENGGVNSQTRVNLQNQVEKTYTISVERAV
SRKRRWSAPERGEILRSQEDPQVLPKFSFLPHQLKVSIEGRSSTGC
NT seq
2481 nt
NT seq
+upstream
nt +downstream
nt
atgaagtctaaccaggagcgttgtaatgagtgccttccgccaaaaaagcgggagatttta
gctctggaagagaagcaggtgctggtgtcagctgctgttagcgagagccagagtggagag
aatttggcttggctagccagcgttgctaccatggctagcatggcccacatccccaacaat
gcaggcccatcacagagcaacagtgctgagcctgacagccccccaccatcaaataaggct
ctcactgtggtgacggaatatcctccaaccactacatctgctggcttttcgttctcttcc
aatagctccacatacagaggagttttctctgggcctaccgtgctaacagccaatcctgcg
gttctctccaccagcctttctcaaaccataggctcagtccaatacacacaacttcccccc
aatctccagctcatagggccctacacaagttatatctcttcacagattgtgccgtccacg
tccagtccaacacagccacggcggacaccacaagaggtcttggccacaacagctgtcatc
tcccaagcatccagccttgattcacagagtcatcatgtgatttcttctataccaaatgtt
tcccacagtcaatgcatccaagtagagagtgctcccttgggcttgacagtgtcctcccct
tctgcccaactgcccattcagatccatccacattcagcagtccttgcccctcatgccctg
gccctcaccccctctcaagtggttctacactacacagatggcttcattgcaaagcagcca
gactcccaccccagagagatgcagaatggtaccataggagagattgcagtggtcaagcac
agtactgccaaagggatttctagccagccagaaggcgaccagagccacaagcaaaaccac
aacctgggcctccagacccaagctcaggtcctgctcccagcagactacagcagtcatgac
agaacaggactgcagacttcgctgatgttggtatccagtagccaccttgcagcaaacagc
aactcagagctccaaagtatcttggggaaggaccactcatctttgcaccttgctgagaga
ggagggatctgcataggcaagccaatgtccagagtgtccgcccttagttcctcagacagc
caagtttctccggcctccacaatttccccgcacacactcctgcaggctactcacaacact
ccccaacaagagctctccaccagcctttactctgcaacgcagctcccaattattggctac
atcactagtgcttctggtggacctcagcaagcagtaactggttatcagagcaacctgcca
cagcacgtggtgatctcaggcaacccctccttgctcattccggtgagtgccactaacatc
aatccaactactgctgagccggaggtcactcgctgttctgtcatccccagtgtagccaat
gcatcaacagctctgcctcagacctttattaatacatccccacctgcagctgcagcttca
gtcctacccaatggtaaagacattacagtctctgacggaggtcatgcctcctgtgtcgtg
ccaagtccaacccaaatacagctgcctgttctttcagccagtgtggtgggatctccagtt
cctataacacctccagcatccacaagcccacacagctcaccatcgtcaccttcagcaggc
ctaccaccattcttcatgaagggctctattatccagttggcagacggagaacttaagcgt
gtggaggatctgcggacagaggactttgtgcaaagtgcggaggtgagtggagaactgaag
attgattccagcactgtagagcgcatagagtgcagccgcacacccaatgctgtcatcata
cagttctcagtgggtgagaacaaagcccaggtctgtgtcgaggttctagtggagtaccct
ttcttcgtgtttggtcaaggttggtcgtcctgctgccctgaccgcaccacccagttgcta
gcactatcctgtgccaaactctctgtgggtgatgtttgtatatctctcacccttaaaagc
ctaaaagatagcattcaaaagaaagatctcttttcagactctgtgacgaaacacaaccat
actttgaaaccagccaaaaacaatgggccaattgaggaaagaccaacccaactggacgat
cttaagaaaggacacaaaatgacatcaggaatggaaaatagtgcaggaacactggttgag
acttccaacccaagaaatgtgttgactctcttggagaatgggggcgtaaactctcagaca
cgggtaaacctccagaaccaggtggaaaaaacatacacaattagtgttgagagagcagtc
agccgcaagaggagatggtctgccccagagaggggagaaatactgaggtcacaagaggac
cctcaagttttacccaaattttccttcctcccacatcagctgaaggtcagcattgagggc
cgctccagcacaggttgctga
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