Garra rufa (doctor fish): 141342900
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Entry
141342900 CDS
T11039
Symbol
irx4a
Name
(RefSeq) iroquois-class homeodomain protein IRX-4a
KO
K24889
iroquois-class homeodomain protein IRX
Organism
grf Garra rufa (doctor fish)
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
grf03000
]
141342900 (irx4a)
Transcription factors [BR:
grf03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
141342900 (irx4a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeobox_KN
Homeodomain
Motif
Other DBs
NCBI-GeneID:
141342900
NCBI-ProteinID:
XP_073703580
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Position
9:complement(43458371..43462068)
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AA seq
462 aa
AA seq
DB search
MSYPQFGYPYSSAPQFLMTTNSLTSCCESSTRSISDSSAQTPVYCPVYESRLLATARHEL
SSAAALGVYGSPYTGGQGYGNYVTYGADASAFYSLGTFDAKDGSASAHAGITQAAAYYPY
DPTLGQYQYDRYGSMEGGTRRKNATRETTSTLKAWLQEHRKNPYPTKGEKIMLAIITKMT
LTQVSTWFANARRRLKKENKMTWPPRNKGSDDKKYDDDDEDGSQEDQIKSETNDDESKSR
EDKELQLSDLDDFDTIESESSECELKHRFHMNAHMATTDDRLKEPSPKLSIPGLLEAERD
LAKSCLKGTAGDCEHELRHSKTCFQQQGHPLLDSKPRIWSLAQTATSLNPTEYSSCMLRC
QPSPSASSPVNGLERQQDSPVTTLRNWVDGVFHDPLFRHSSLNQAQTNTTVSWTTSTKGS
ILETGALGRSVGNSNNVIKTQQQEASKDSMTFPKGVNKIFCS
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atgtcctatcctcagttcggatatccttactcttctgcacctcagttcctcatgaccacc
aactcattgacatcttgctgcgagtcgagcaccagatccatctcggattcgtccgcgcag
acgcccgtttactgtcccgtgtatgagagcagactgctggccaccgccagacacgagctg
agctccgccgccgcgctgggagtctacgggagtccgtacaccggcggacagggctacggg
aattatgttacctatggagctgacgcgtccgctttctactctttgggtacgtttgatgcc
aaagatggaagtgcgtctgcgcatgcgggtataacacaggctgccgcatattacccatat
gatcccaccctgggacagtaccagtatgacagatatggatctatggagggaggaaccaga
aggaagaacgccacccgtgagacgaccagcacgttgaaagcgtggcttcaggagcaccgg
aagaacccctatcccaccaaaggcgagaagatcatgctggccatcatcaccaagatgacc
ctcacgcaggtgtccacctggttcgccaacgccagaagaaggctcaagaaggagaacaag
atgacatggccaccgagaaacaagggctcagacgataaaaagtacgacgatgatgatgag
gatggctcgcaagaagatcaaatcaaaagtgaaaccaacgatgacgagagcaaaagtcga
gaagacaaggagcttcagctgagtgacttggacgactttgacaccatcgagtctgagagc
tcagagtgtgaactcaaacaccgctttcacatgaacgcgcacatggcgaccaccgacgat
cgcctcaaggagccttctccaaaactctccattccgggtctgctcgaagccgagcgcgat
ctcgccaaaagctgcttgaaaggcaccgcgggagactgcgagcacgagcttcggcacagc
aaaacgtgcttccagcagcagggccatccgttactggacagcaaacctcgcatctggtct
ctggcccagaccgcgacctcgttgaaccccacagagtactcctcgtgtatgcttcgatgt
caaccatcgccctccgcctcctcacctgtcaacggcctggagagacagcaggactcacct
gttacaactctcaggaactgggtagatggagtttttcacgaccccttgtttagacacagc
tcgttaaaccaagcacagacgaacactacggtttcttggaccacctcgaccaaagggtcg
atcttagagactggtgccctcggacgctccgtagggaacagcaacaacgtgataaaaaca
cagcagcaagaggccagcaaggacagtatgacatttccaaagggggtgaataaaatattc
tgctcctag
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