Garra rufa (doctor fish): 141342937
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Entry
141342937 CDS
T11039
Name
(RefSeq) sphingomyelin phosphodiesterase 5-like
KO
K12352
sphingomyelin phosphodiesterase 3 [EC:
3.1.4.12
]
Organism
grf Garra rufa (doctor fish)
Pathway
grf00600
Sphingolipid metabolism
grf01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
141342937
Enzymes [BR:
grf01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.12 sphingomyelin phosphodiesterase
141342937
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GFIT
Motif
Pfam:
Exo_endo_phos
Exo_endo_phos_PGAP2IP
Motif
Other DBs
NCBI-GeneID:
141342937
NCBI-ProteinID:
XP_073703623
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Position
9:complement(47714..68602)
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AA seq
546 aa
AA seq
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MSLRASPFPNCFLEGLHAVGWGLIFPCFWFLDRLLAVCISTSLERMWRLEMECYLHPLQV
VFGSILFLILFIISTPLALLGFILWAPLQAVRRPFAYHHQEQIIPMEDRNSRWEETGKVS
FGFLTGNLCLLPDSLARFNNLGHSQKRAAYIGKSIVQGVTRPHIRIFVDSPSSCGTVTPS
SSLIPQPAPSSYGSVDVSATNQTEDVHETDGLPKPNCNQNSNQHQNPQRTLLRDADVPME
VSALFPSSVDVVCLQEIFDKRAALKLARALGPLYGHVLYDVGVYACFPAGTCSSFKFFNS
GLFLASRYPVMEAEYHCFPNGRGEDALAAKGLLTVKVEIGLRKDEKKMVGYINCTHLHAP
EGDGEIRFEQLNMLTKWISEFQAVTRRDDEMVMFDVLCGDFNFDNCSPDDRLEQSHSVFE
EYTDPCRAAAGREKPWVIGTLLEQPTLYDENIRTPDNLQRTLETEELRKDYISPPVAIEG
VPLVYPEPDQPWIGRRIDYLLYRDTSVSSRCKTELEEFTYVTQLAGLTDHVPLGFRLSVS
LDSQAM
NT seq
1641 nt
NT seq
+upstream
nt +downstream
nt
atgtctttaagagcgtctcctttccccaattgcttcctggaaggtctccatgccgtagga
tggggtctgatcttcccttgtttctggttcctggaccgcctcctcgccgtctgcatctcc
accagcctggagcgcatgtggcgcctcgaaatggagtgctacctacatccgcttcaggtc
gtcttcggctccatcctcttcctcatcctcttcataatctccactccattggccctgctg
gggttcatactatgggcaccactgcaggccgtacgccgaccgtttgcgtaccaccatcag
gagcagatcattcccatggaggatcggaactctagatgggaagagacggggaaagtcagt
ttcgggtttttgacgggaaacctctgcttgcttcccgacagcctcgcacgcttcaacaac
ctcgggcactcgcaaaaacgcgcggcgtacattggaaaaagcatcgtccagggtgtcaca
cgtcctcacatccgtatcttcgtggattctcccagcagctgcggaacggttacgccatcc
agcagtttgatcccgcaaccggcgccgtcttcgtacggatccgtcgacgtctccgccacc
aatcagacagaagacgttcacgaaaccgacggccttcccaaacccaactgcaatcagaac
tccaaccagcaccagaatccgcagaggacgctcttacgggacgctgacgtgccgatggaa
gtgtctgctctgttcccgtcctccgtggacgtcgtgtgtctccaggagattttcgataaa
agagccgctctgaagctggcgcgggctctcgggccgctttacggacacgtgctttacgac
gtcggcgtttacgcttgctttcctgccggaacctgctcgtcttttaagttttttaacagc
gggttgttcttggctagtcgctatcctgtgatggaggctgagtatcattgctttccaaat
ggacgaggagaagacgctctggctgccaaaggcctgcttactgtaaaggtggaaatcggg
ttacgaaaagatgagaagaaaatggtcgggtatattaactgcactcacctgcacgctcct
gaaggggatggagagattcgttttgagcagctgaacatgttgaccaagtggatcagtgaa
ttccaggcagtgaccagaagagacgacgaaatggtgatgtttgatgtgctttgtggcgac
tttaactttgacaactgctctccagatgacaggctggagcaaagccacagtgtgtttgag
gaatatacagatccctgcagagctgcagctggaagagagaagccctgggtcatcggaacc
ctgttggaacagccaacgctgtacgatgagaacatacggacaccagacaacctgcagcgg
actctggagactgaagagctgcggaaggactatatttctccaccggtggccatcgaaggc
gttcctctggtctaccctgagcctgatcagccctggatcggccgacggatcgattacctg
ctctatcgagacacctccgtctccagtcgctgcaaaacggagctggaagagttcacatac
gtgactcagctggccggactgacggatcacgttcctctgggcttcaggctctccgtctct
ctggattcacaagcgatgtag
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