Garra rufa (doctor fish): 141342940
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Entry
141342940 CDS
T11039
Symbol
emg1
Name
(RefSeq) ribosomal RNA small subunit methyltransferase NEP1
KO
K14568
rRNA small subunit pseudouridine methyltransferase Nep1 [EC:
2.1.1.260
]
Organism
grf Garra rufa (doctor fish)
Pathway
grf03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
141342940 (emg1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
grf03009
]
141342940 (emg1)
Enzymes [BR:
grf01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.260 rRNA small subunit pseudouridine methyltransferase Nep1
141342940 (emg1)
Ribosome biogenesis [BR:
grf03009
]
Eukaryotic type
90S particles
Other 90S particles
141342940 (emg1)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
EMG1
Motif
Other DBs
NCBI-GeneID:
141342940
NCBI-ProteinID:
XP_073703628
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All DBs
Position
9:37585856..37591068
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AA seq
240 aa
AA seq
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MAAHAGDKRGLEHLDEYEPKRARQQDKKSLPDLMTENRLVVVLEGATLETVKVGKIFELL
NCDQHKNIIVKSGRDPGTIRPDITHQCLLMLLDSPLNRAGLLQVYIHTAKNALIEINPQT
RIPRTFTRFCGLMVQLLHKMSVRAADGPHRLLRLIKNPVSDHLPPGCIRFSTSFKAGEAV
CPRTIVPKNGSAAVVIGAFAHGTVNVDYTEKTVSISNYPLSAALTCAKMCSAFEEVWGVL
NT seq
723 nt
NT seq
+upstream
nt +downstream
nt
atggctgcacacgctggagacaagcgtggtctggagcatttagatgaatatgaaccaaaa
cgggcaagacagcaagacaagaaaagcttgcctgatcttatgacagaaaatcgccttgtt
gttgttttagaaggagcgacgcttgaaaccgtaaaggttgggaagatatttgagttgctg
aactgtgatcaacataaaaatatcatcgtaaaaagtggcagagatcctggaacgattcgc
ccggatatcacacatcagtgcctgttgatgttactggacagtcctttgaacagagctgga
ctgcttcaagtgtacattcacacagcgaagaatgctttgatcgagatcaacccacagaca
agaattcctcgcacttttacacgattttgtggactaatggtccagctcctgcacaagatg
agtgtgagagcagcggatggtcctcaccgcctgttaagactgattaaaaatccagtgtca
gaccacctaccacctggttgcattcgattttcaacatcattcaaagcaggagaggctgtg
tgtcccagaacaattgtccctaaaaatggatctgccgctgttgtcattggagcattcgca
catggaacagtcaatgtcgactacacagagaagacggtgtccattagtaactatcctctg
tctgcagctctgacctgtgccaagatgtgttctgcatttgaggaggtctggggagtgtta
tga
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